RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 LHX8Q68G74 356 aa9.09□□□□□ -0.95
PABPC1-212ENST00000519622 MS4A3Q96HJ5 214 aa9.08□□□□□ -0.96
PABPC1-212ENST00000519622 NUBP1P53384 320 aa9.05□□□□□ -0.96
PABPC1-212ENST00000519622 PELP1Q8IZL8 1130 aaKnown RBP9.05□□□□□ -0.96
PABPC1-212ENST00000519622 KIF12Q96FN5 646 aa9.04□□□□□ -0.96
PABPC1-212ENST00000519622 FBXO3Q9UK99 471 aa9.03□□□□□ -0.96
PABPC1-212ENST00000519622 MAP3K13O43283 966 aa9□□□□□ -0.97
PABPC1-212ENST00000519622 TRPC6Q9Y210 931 aa9□□□□□ -0.97
PABPC1-212ENST00000519622 ATMINO43313 823 aaPredicted RBP8.98□□□□□ -0.97
PABPC1-212ENST00000519622 ZBTB47Q9UFB7 747 aaPredicted RBP8.98□□□□□ -0.97
PABPC1-212ENST00000519622 POTEB2H3BUK9 544 aa8.97□□□□□ -0.97
PABPC1-212ENST00000519622 ASTLQ6HA08 431 aaPredicted RBP8.97□□□□□ -0.97
PABPC1-212ENST00000519622 VASPP50552 380 aaPredicted RBP8.96□□□□□ -0.98
PABPC1-212ENST00000519622 ATN1P54259 1190 aaPredicted RBP8.93□□□□□ -0.98
PABPC1-212ENST00000519622 BMP2KQ9NSY1 1161 aaPredicted RBP8.92□□□□□ -0.98
PABPC1-212ENST00000519622 FAM212AQ96EL1 285 aa8.91□□□□□ -0.98
PABPC1-212ENST00000519622 DCAF8Q5TAQ9 597 aa8.89□□□□□ -0.99
PABPC1-212ENST00000519622 METRNQ9UJH8 293 aa8.89□□□□□ -0.99
PABPC1-212ENST00000519622 PCDHB13Q9Y5F0 798 aa8.89□□□□□ -0.99
PABPC1-212ENST00000519622 IFNL1Q8IU54 200 aa8.88□□□□□ -0.99
PABPC1-212ENST00000519622 KLHL34Q8N239 644 aa8.88□□□□□ -0.99
PABPC1-212ENST00000519622 POTEJP0CG39 1038 aa8.87□□□□□ -0.99
PABPC1-212ENST00000519622 OTUD5Q96G74 571 aa8.87□□□□□ -0.99
PABPC1-212ENST00000519622 TTLL13PA6NNM8 815 aa8.86□□□□□ -0.99
PABPC1-212ENST00000519622 C7P10643 843 aa8.86□□□□□ -0.99
PABPC1-212ENST00000519622 PYGBP11216 843 aa8.86□□□□□ -0.99
PABPC1-212ENST00000519622 TIE1P35590 1138 aa8.86□□□□□ -0.99
PABPC1-212ENST00000519622 IFNLR1Q8IU57 520 aaPredicted RBP8.86□□□□□ -0.99
PABPC1-212ENST00000519622 SLC39A7Q92504 469 aa8.86□□□□□ -0.99
PABPC1-212ENST00000519622 SGIP1Q9BQI5 828 aa8.86□□□□□ -0.99
PABPC1-212ENST00000519622 POTEFA5A3E0 1075 aa8.85□□□□□ -0.99
PABPC1-212ENST00000519622 PCDHB8Q9UN66 801 aa8.8□□□□□ -1
PABPC1-212ENST00000519622 TRIM35Q9UPQ4 493 aa8.79□□□□□ -1
PABPC1-212ENST00000519622 COLQQ9Y215 455 aaPredicted RBP8.79□□□□□ -1
PABPC1-212ENST00000519622 TMEM106CQ9BVX2 250 aa8.78□□□□□ -1
PABPC1-212ENST00000519622 GSE1Q14687 1217 aa8.75□□□□□ -1.01
PABPC1-212ENST00000519622 SPOCK2Q92563 424 aa8.75□□□□□ -1.01
PABPC1-212ENST00000519622 RTN4Q9NQC3 1192 aaKnown RBP8.74□□□□□ -1.01
PABPC1-212ENST00000519622 CHRM1P11229 460 aaPredicted RBP8.72□□□□□ -1.01
PABPC1-212ENST00000519622 AMER1Q5JTC6 1135 aaPredicted RBP8.72□□□□□ -1.01
PABPC1-212ENST00000519622 SEC24BO95487 1268 aa8.7□□□□□ -1.02
PABPC1-212ENST00000519622 IER5LQ5T953 404 aa8.7□□□□□ -1.02
PABPC1-212ENST00000519622 CIZ1Q9ULV3 898 aaPredicted RBP8.7□□□□□ -1.02
PABPC1-212ENST00000519622 IRX5P78411 483 aaPredicted RBP8.67□□□□□ -1.02
PABPC1-212ENST00000519622 MAMSTRQ6ZN01 415 aa8.66□□□□□ -1.02
PABPC1-212ENST00000519622 ZNF467Q7Z7K2 595 aaPredicted RBP8.66□□□□□ -1.02
PABPC1-212ENST00000519622 CCDC180Q9P1Z9 1646 aa8.65□□□□□ -1.03
PABPC1-212ENST00000519622 SCUBE2Q9NQ36 999 aa8.64□□□□□ -1.03
PABPC1-212ENST00000519622 PSEN1P49768 467 aa8.63□□□□□ -1.03
PABPC1-212ENST00000519622 PLCG2P16885 1265 aa8.62□□□□□ -1.03
PABPC1-212ENST00000519622 OCEL1Q9H607 264 aa8.61□□□□□ -1.03
PABPC1-212ENST00000519622 LCE2DQ5TA82 110 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-212ENST00000519622 PDAP1Q13442 181 aaKnown RBP8.58□□□□□ -1.04
PABPC1-212ENST00000519622 PKD2Q13563 968 aa8.58□□□□□ -1.04
PABPC1-212ENST00000519622 PDCD7Q8N8D1 485 aaKnown RBP8.58□□□□□ -1.04
PABPC1-212ENST00000519622 FAM163AQ96GL9 167 aaPredicted RBP8.56□□□□□ -1.04
PABPC1-212ENST00000519622 POTEMA6NI47 508 aa8.54□□□□□ -1.04
PABPC1-212ENST00000519622 MKRN3Q13064 507 aaKnown RBP8.54□□□□□ -1.04
PABPC1-212ENST00000519622 RNF25Q96BH1 459 aaPredicted RBP8.54□□□□□ -1.04
PABPC1-212ENST00000519622 GOLGA2Q08379 1002 aa8.53□□□□□ -1.04
PABPC1-212ENST00000519622 POTEGQ6S5H5 508 aa8.53□□□□□ -1.04
PABPC1-212ENST00000519622 SLAIN1Q8ND83 568 aa8.53□□□□□ -1.04
PABPC1-212ENST00000519622 CABP2Q9NPB3 220 aa8.53□□□□□ -1.04
PABPC1-212ENST00000519622 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.52□□□□□ -1.057e-20■□□□□ 11
PABPC1-212ENST00000519622 ECM2O94769 699 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-212ENST00000519622 DPY19L2Q6NUT2 758 aa8.51□□□□□ -1.05
PABPC1-212ENST00000519622 ILDR1Q86SU0 546 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-212ENST00000519622 TRIM41Q8WV44 630 aa8.51□□□□□ -1.05
PABPC1-212ENST00000519622 ZCCHC6Q5VYS8 1495 aaKnown RBP8.49□□□□□ -1.05
PABPC1-212ENST00000519622 RIOK3O14730 519 aaKnown RBP8.46□□□□□ -1.06
PABPC1-212ENST00000519622 EFCAB3Q8N7B9 438 aa8.46□□□□□ -1.06
PABPC1-212ENST00000519622 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.45□□□□□ -1.06
PABPC1-212ENST00000519622 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.44□□□□□ -1.06
PABPC1-212ENST00000519622 RGL2O15211 777 aa8.44□□□□□ -1.06
PABPC1-212ENST00000519622 L3MBTL3Q96JM7 780 aaPredicted RBP8.44□□□□□ -1.06
PABPC1-212ENST00000519622 ZFP91Q96JP5 570 aaPredicted RBP8.44□□□□□ -1.06
PABPC1-212ENST00000519622 DCAF8L2P0C7V8 631 aa8.43□□□□□ -1.06
PABPC1-212ENST00000519622 ST18O60284 1047 aa8.42□□□□□ -1.06
PABPC1-212ENST00000519622 VGFO15240 615 aaPredicted RBP8.4□□□□□ -1.06
PABPC1-212ENST00000519622 PLSCR2Q9NRY7 297 aa8.4□□□□□ -1.06
PABPC1-212ENST00000519622 C3orf67Q6ZVT6 689 aa8.39□□□□□ -1.07
PABPC1-212ENST00000519622 BOLA1Q9Y3E2 137 aa8.39□□□□□ -1.07
PABPC1-212ENST00000519622 MS4A4AQ96JQ5 239 aa8.37□□□□□ -1.07
PABPC1-212ENST00000519622 PHF8Q9UPP1 1060 aa8.36□□□□□ -1.07
PABPC1-212ENST00000519622 TMEM121BQ9BXQ6 578 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-212ENST00000519622 BCL11BQ9C0K0 894 aaPredicted RBP8.34□□□□□ -1.07
PABPC1-212ENST00000519622 SOX12O15370 315 aa8.33□□□□□ -1.08
PABPC1-212ENST00000519622 MARVELD3Q96A59 401 aa8.32□□□□□ -1.08
PABPC1-212ENST00000519622 PCDH10Q9P2E7 1040 aa8.32□□□□□ -1.08
PABPC1-212ENST00000519622 SNPHO15079 494 aa8.31□□□□□ -1.08
PABPC1-212ENST00000519622 STK24Q9Y6E0 443 aa8.31□□□□□ -1.08
PABPC1-212ENST00000519622 G3V3G9 751 aa8.3□□□□□ -1.08
PABPC1-212ENST00000519622 TMEM92Q6UXU6 159 aa8.3□□□□□ -1.08
PABPC1-212ENST00000519622 CDAN1Q8IWY9 1227 aa8.3□□□□□ -1.08
PABPC1-212ENST00000519622 MICALL2Q8IY33 904 aa8.3□□□□□ -1.08
PABPC1-212ENST00000519622 DCAF1Q9Y4B6 1507 aa8.29□□□□□ -1.08
PABPC1-212ENST00000519622 STK25O00506 426 aa8.29□□□□□ -1.08
PABPC1-212ENST00000519622 FBXO22Q8NEZ5 403 aa8.29□□□□□ -1.08
PABPC1-212ENST00000519622 HOXB3P14651 431 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-212ENST00000519622 MFRPQ9BY79 579 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms