RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
ATP6V1C1-204ENST00000518959 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
ATP6V1C1-204ENST00000518959 C7P10643 843 aa12.15□□□□□ -0.46
ATP6V1C1-204ENST00000518959 ATMINO43313 823 aaPredicted RBP12.14□□□□□ -0.47
ATP6V1C1-204ENST00000518959 POTEGQ6S5H5 508 aa12.14□□□□□ -0.47
ATP6V1C1-204ENST00000518959 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
ATP6V1C1-204ENST00000518959 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
ATP6V1C1-204ENST00000518959 CCDC61Q9Y6R9 512 aa12.04□□□□□ -0.48
ATP6V1C1-204ENST00000518959 POTEJP0CG39 1038 aa12.03□□□□□ -0.48
ATP6V1C1-204ENST00000518959 ATN1P54259 1190 aaPredicted RBP12.03□□□□□ -0.48
ATP6V1C1-204ENST00000518959 SCUBE2Q9NQ36 999 aa12.03□□□□□ -0.48
ATP6V1C1-204ENST00000518959 KIF12Q96FN5 646 aa12.01□□□□□ -0.49
ATP6V1C1-204ENST00000518959 PROM2Q8N271 834 aa11.99□□□□□ -0.49
ATP6V1C1-204ENST00000518959 FAM163AQ96GL9 167 aaPredicted RBP11.99□□□□□ -0.49
ATP6V1C1-204ENST00000518959 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
ATP6V1C1-204ENST00000518959 MIER1Q8N108 512 aa11.98□□□□□ -0.49
ATP6V1C1-204ENST00000518959 BMP2KQ9NSY1 1161 aaPredicted RBP11.96□□□□□ -0.49
ATP6V1C1-204ENST00000518959 MAP3K13O43283 966 aa11.94□□□□□ -0.5
ATP6V1C1-204ENST00000518959 TRPC6Q9Y210 931 aa11.92□□□□□ -0.5
ATP6V1C1-204ENST00000518959 SEC24BO95487 1268 aa11.9□□□□□ -0.5
ATP6V1C1-204ENST00000518959 TIE1P35590 1138 aa11.9□□□□□ -0.5
ATP6V1C1-204ENST00000518959 RASEFQ8IZ41 740 aa11.9□□□□□ -0.5
ATP6V1C1-204ENST00000518959 POTEFA5A3E0 1075 aa11.86□□□□□ -0.51
ATP6V1C1-204ENST00000518959 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
ATP6V1C1-204ENST00000518959 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
ATP6V1C1-204ENST00000518959 LCE2DQ5TA82 110 aaPredicted RBP11.84□□□□□ -0.51
ATP6V1C1-204ENST00000518959 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
ATP6V1C1-204ENST00000518959 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
ATP6V1C1-204ENST00000518959 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
ATP6V1C1-204ENST00000518959 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
ATP6V1C1-204ENST00000518959 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
ATP6V1C1-204ENST00000518959 IER5LQ5T953 404 aa11.75□□□□□ -0.53
ATP6V1C1-204ENST00000518959 SLAIN1Q8ND83 568 aa11.7□□□□□ -0.54
ATP6V1C1-204ENST00000518959 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
ATP6V1C1-204ENST00000518959 IFNL1Q8IU54 200 aa11.69□□□□□ -0.54
ATP6V1C1-204ENST00000518959 CDAN1Q8IWY9 1227 aa11.69□□□□□ -0.54
ATP6V1C1-204ENST00000518959 TMEM106CQ9BVX2 250 aa11.69□□□□□ -0.54
ATP6V1C1-204ENST00000518959 NUBP1P53384 320 aa11.68□□□□□ -0.54
ATP6V1C1-204ENST00000518959 PLCG2P16885 1265 aa11.67□□□□□ -0.54
ATP6V1C1-204ENST00000518959 ST18O60284 1047 aa11.6□□□□□ -0.55
ATP6V1C1-204ENST00000518959 DCAF8Q5TAQ9 597 aa11.57□□□□□ -0.56
ATP6V1C1-204ENST00000518959 IRX5P78411 483 aaPredicted RBP11.55□□□□□ -0.56
ATP6V1C1-204ENST00000518959 OCEL1Q9H607 264 aa11.54□□□□□ -0.56
ATP6V1C1-204ENST00000518959 PYGBP11216 843 aa11.53□□□□□ -0.56
ATP6V1C1-204ENST00000518959 FKBP8Q14318 412 aa11.51□□□□□ -0.57
ATP6V1C1-204ENST00000518959 SNPHO15079 494 aa11.5□□□□□ -0.57
ATP6V1C1-204ENST00000518959 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.5□□□□□ -0.57
ATP6V1C1-204ENST00000518959 TMEM121BQ9BXQ6 578 aaPredicted RBP11.47□□□□□ -0.57
ATP6V1C1-204ENST00000518959 PCDHB8Q9UN66 801 aa11.47□□□□□ -0.57
ATP6V1C1-204ENST00000518959 GOLGA2Q08379 1002 aa11.42□□□□□ -0.58
ATP6V1C1-204ENST00000518959 MARVELD3Q96A59 401 aa11.42□□□□□ -0.58
ATP6V1C1-204ENST00000518959 C3orf67Q6ZVT6 689 aa11.4□□□□□ -0.58
ATP6V1C1-204ENST00000518959 FBXO3Q9UK99 471 aa11.4□□□□□ -0.58
ATP6V1C1-204ENST00000518959 MMRN1Q13201 1228 aa11.39□□□□□ -0.59
ATP6V1C1-204ENST00000518959 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
ATP6V1C1-204ENST00000518959 SPNS2Q8IVW8 549 aa11.38□□□□□ -0.59
ATP6V1C1-204ENST00000518959 KLHL34Q8N239 644 aa11.37□□□□□ -0.59
ATP6V1C1-204ENST00000518959 ZNF467Q7Z7K2 595 aaPredicted RBP11.36□□□□□ -0.59
ATP6V1C1-204ENST00000518959 L3MBTL3Q96JM7 780 aaPredicted RBP11.35□□□□□ -0.59
ATP6V1C1-204ENST00000518959 GSE1Q14687 1217 aa11.34□□□□□ -0.59
ATP6V1C1-204ENST00000518959 EMP3P54852 163 aa11.32□□□□□ -0.6
ATP6V1C1-204ENST00000518959 PDCD7Q8N8D1 485 aaKnown RBP11.32□□□□□ -0.6
ATP6V1C1-204ENST00000518959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.3□□□□□ -0.64e-6■■■□□ 17.1
ATP6V1C1-204ENST00000518959 PSEN1P49768 467 aa11.26□□□□□ -0.61
ATP6V1C1-204ENST00000518959 FAM205CA6NFA0 338 aa11.24□□□□□ -0.61
ATP6V1C1-204ENST00000518959 VASPP50552 380 aaPredicted RBP11.23□□□□□ -0.61
ATP6V1C1-204ENST00000518959 G3V3G9 751 aa11.22□□□□□ -0.61
ATP6V1C1-204ENST00000518959 CHRM1P11229 460 aaPredicted RBP11.22□□□□□ -0.61
ATP6V1C1-204ENST00000518959 HS3ST6Q96QI5 342 aa11.22□□□□□ -0.61
ATP6V1C1-204ENST00000518959 PDAP1Q13442 181 aaKnown RBP11.17□□□□□ -0.62
ATP6V1C1-204ENST00000518959 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
ATP6V1C1-204ENST00000518959 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
ATP6V1C1-204ENST00000518959 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
ATP6V1C1-204ENST00000518959 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.62
ATP6V1C1-204ENST00000518959 KRTAP3-2Q9BYR7 98 aa11.15□□□□□ -0.62
ATP6V1C1-204ENST00000518959 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
ATP6V1C1-204ENST00000518959 CIZ1Q9ULV3 898 aaPredicted RBP11.13□□□□□ -0.63
ATP6V1C1-204ENST00000518959 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
ATP6V1C1-204ENST00000518959 ZNF710Q8N1W2 664 aa11.12□□□□□ -0.63
ATP6V1C1-204ENST00000518959 ILDR1Q86SU0 546 aaPredicted RBP11.09□□□□□ -0.63
ATP6V1C1-204ENST00000518959 SPOCK2Q92563 424 aa11.07□□□□□ -0.64
ATP6V1C1-204ENST00000518959 ERBB3P21860 1342 aa11.06□□□□□ -0.64
ATP6V1C1-204ENST00000518959 HOXB3P14651 431 aaPredicted RBP11.05□□□□□ -0.64
ATP6V1C1-204ENST00000518959 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
ATP6V1C1-204ENST00000518959 HOXB1P14653 301 aaPredicted RBP11.02□□□□□ -0.65
ATP6V1C1-204ENST00000518959 RIMBP2O15034 1052 aa11.01□□□□□ -0.65
ATP6V1C1-204ENST00000518959 IFNLR1Q8IU57 520 aaPredicted RBP10.97□□□□□ -0.65
ATP6V1C1-204ENST00000518959 VARS2Q5ST30 1063 aaKnown RBP10.95□□□□□ -0.66
ATP6V1C1-204ENST00000518959 EFCAB3Q8N7B9 438 aa10.95□□□□□ -0.66
ATP6V1C1-204ENST00000518959 RNF166Q96A37 237 aaPredicted RBP10.95□□□□□ -0.66
ATP6V1C1-204ENST00000518959 TRIM41Q8WV44 630 aa10.89□□□□□ -0.67
ATP6V1C1-204ENST00000518959 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
ATP6V1C1-204ENST00000518959 MICALL2Q8IY33 904 aa10.88□□□□□ -0.67
ATP6V1C1-204ENST00000518959 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
ATP6V1C1-204ENST00000518959 ZNF687Q8N1G0 1237 aa10.84□□□□□ -0.67
ATP6V1C1-204ENST00000518959 TMEM92Q6UXU6 159 aa10.83□□□□□ -0.68
ATP6V1C1-204ENST00000518959 SOX12O15370 315 aa10.81□□□□□ -0.68
ATP6V1C1-204ENST00000518959 GPR153Q6NV75 609 aa10.8□□□□□ -0.68
ATP6V1C1-204ENST00000518959 PTGER2P43116 358 aa10.78□□□□□ -0.68
ATP6V1C1-204ENST00000518959 ANKRD13DQ6ZTN6 518 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms