RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 RGL2O15211 777 aa10.94□□□□□ -0.66
LINC00534-201ENST00000517400 NPM1P06748 294 aaKnown RBP eCLIP10.93□□□□□ -0.66
LINC00534-201ENST00000517400 DCAF8Q5TAQ9 597 aa10.92□□□□□ -0.66
LINC00534-201ENST00000517400 FAM212AQ96EL1 285 aa10.91□□□□□ -0.66
LINC00534-201ENST00000517400 FARP1Q9Y4F1 1045 aaPredicted RBP10.91□□□□□ -0.66
LINC00534-201ENST00000517400 RASEFQ8IZ41 740 aa10.88□□□□□ -0.67
LINC00534-201ENST00000517400 PLCB2Q00722 1185 aa10.87□□□□□ -0.67
LINC00534-201ENST00000517400 CHRM1P11229 460 aaPredicted RBP10.84□□□□□ -0.67
LINC00534-201ENST00000517400 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
LINC00534-201ENST00000517400 RNF25Q96BH1 459 aaPredicted RBP10.8□□□□□ -0.68
LINC00534-201ENST00000517400 GABBR2O75899 941 aa10.79□□□□□ -0.68
LINC00534-201ENST00000517400 CD44P16070 742 aaKnown RBP10.78□□□□□ -0.68
LINC00534-201ENST00000517400 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.78□□□□□ -0.68
LINC00534-201ENST00000517400 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
LINC00534-201ENST00000517400 CHGAP10645 457 aaKnown RBP10.76□□□□□ -0.69
LINC00534-201ENST00000517400 TAOK2Q9UL54 1235 aa10.76□□□□□ -0.69
LINC00534-201ENST00000517400 PYGBP11216 843 aa10.73□□□□□ -0.69
LINC00534-201ENST00000517400 HS6ST3Q8IZP7 471 aa10.73□□□□□ -0.69
LINC00534-201ENST00000517400 TSPYL2Q9H2G4 693 aaPredicted RBP10.72□□□□□ -0.69
LINC00534-201ENST00000517400 VGFO15240 615 aaPredicted RBP10.7□□□□□ -0.7
LINC00534-201ENST00000517400 DNAJC5Q9H3Z4 198 aa10.7□□□□□ -0.7
LINC00534-201ENST00000517400 SGIP1Q9BQI5 828 aa10.69□□□□□ -0.7
LINC00534-201ENST00000517400 HAP1P54257 671 aaPredicted RBP10.67□□□□□ -0.7
LINC00534-201ENST00000517400 PAXIP1Q6ZW49 1069 aaPredicted RBP10.67□□□□□ -0.7
LINC00534-201ENST00000517400 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
LINC00534-201ENST00000517400 ZNF579Q8NAF0 562 aaKnown RBP10.66□□□□□ -0.7
LINC00534-201ENST00000517400 SPRYD3Q8NCJ5 442 aa10.66□□□□□ -0.7
LINC00534-201ENST00000517400 PAK3O75914 559 aaPredicted RBP10.64□□□□□ -0.71
LINC00534-201ENST00000517400 POTEIP0CG38 1075 aa10.64□□□□□ -0.71
LINC00534-201ENST00000517400 CFAP44Q96MT7 982 aa10.64□□□□□ -0.71
LINC00534-201ENST00000517400 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
LINC00534-201ENST00000517400 STK25O00506 426 aa10.62□□□□□ -0.71
LINC00534-201ENST00000517400 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
LINC00534-201ENST00000517400 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.6□□□□□ -0.71
LINC00534-201ENST00000517400 ZFP91Q96JP5 570 aaPredicted RBP10.6□□□□□ -0.71
LINC00534-201ENST00000517400 CLCN6P51797 869 aa10.58□□□□□ -0.72
LINC00534-201ENST00000517400 VSIG10Q8N0Z9 540 aa10.58□□□□□ -0.72
LINC00534-201ENST00000517400 NKX1-1Q15270 411 aaPredicted RBP10.57□□□□□ -0.72
LINC00534-201ENST00000517400 BCL11BQ9C0K0 894 aaPredicted RBP10.57□□□□□ -0.72
LINC00534-201ENST00000517400 PHF12Q96QT6 1004 aa10.56□□□□□ -0.72
LINC00534-201ENST00000517400 STK24Q9Y6E0 443 aa10.56□□□□□ -0.72
LINC00534-201ENST00000517400 PDAP1Q13442 181 aaKnown RBP10.54□□□□□ -0.72
LINC00534-201ENST00000517400 KIF12Q96FN5 646 aa10.54□□□□□ -0.72
LINC00534-201ENST00000517400 PCDHB8Q9UN66 801 aa10.54□□□□□ -0.72
LINC00534-201ENST00000517400 PCDHB13Q9Y5F0 798 aa10.54□□□□□ -0.72
LINC00534-201ENST00000517400 GALR2O43603 387 aaPredicted RBP10.53□□□□□ -0.72
LINC00534-201ENST00000517400 MAP3K13O43283 966 aa10.51□□□□□ -0.73
LINC00534-201ENST00000517400 GTPBP6O43824 516 aaPredicted RBP10.5□□□□□ -0.73
LINC00534-201ENST00000517400 PSEN1P49768 467 aa10.49□□□□□ -0.73
LINC00534-201ENST00000517400 IFNL1Q8IU54 200 aa10.49□□□□□ -0.73
LINC00534-201ENST00000517400 TSHZ2Q9NRE2 1034 aa10.48□□□□□ -0.73
LINC00534-201ENST00000517400 RYDENQ9NUL5 291 aaKnown RBP10.48□□□□□ -0.73
LINC00534-201ENST00000517400 KDM2AQ9Y2K7 1162 aa10.46□□□□□ -0.73
LINC00534-201ENST00000517400 DCBLD2Q96PD2 775 aa10.43□□□□□ -0.74
LINC00534-201ENST00000517400 LHX8Q68G74 356 aa10.42□□□□□ -0.74
LINC00534-201ENST00000517400 MS4A3Q96HJ5 214 aa10.41□□□□□ -0.74
LINC00534-201ENST00000517400 PELP1Q8IZL8 1130 aaKnown RBP10.37□□□□□ -0.75
LINC00534-201ENST00000517400 MFRPQ9BY79 579 aa10.34□□□□□ -0.75
LINC00534-201ENST00000517400 CABP2Q9NPB3 220 aa10.34□□□□□ -0.75
LINC00534-201ENST00000517400 SOX12O15370 315 aa10.33□□□□□ -0.76
LINC00534-201ENST00000517400 EFCAB3Q8N7B9 438 aa10.33□□□□□ -0.76
LINC00534-201ENST00000517400 ASTLQ6HA08 431 aaPredicted RBP10.32□□□□□ -0.76
LINC00534-201ENST00000517400 ATMINO43313 823 aaPredicted RBP10.31□□□□□ -0.76
LINC00534-201ENST00000517400 TRPC6Q9Y210 931 aa10.31□□□□□ -0.76
LINC00534-201ENST00000517400 BCANQ96GW7 911 aa10.3□□□□□ -0.76
LINC00534-201ENST00000517400 NLRP6P59044 892 aa10.29□□□□□ -0.76
LINC00534-201ENST00000517400 TMEM106CQ9BVX2 250 aa10.29□□□□□ -0.76
LINC00534-201ENST00000517400 POTEB2H3BUK9 544 aa10.28□□□□□ -0.76
LINC00534-201ENST00000517400 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
LINC00534-201ENST00000517400 TIE1P35590 1138 aa10.27□□□□□ -0.77
LINC00534-201ENST00000517400 PHF8Q9UPP1 1060 aa10.26□□□□□ -0.77
LINC00534-201ENST00000517400 ATN1P54259 1190 aaPredicted RBP10.24□□□□□ -0.77
LINC00534-201ENST00000517400 GOLGA2Q08379 1002 aa10.24□□□□□ -0.77
LINC00534-201ENST00000517400 BMP2KQ9NSY1 1161 aaPredicted RBP10.24□□□□□ -0.77
LINC00534-201ENST00000517400 TTLL13PA6NNM8 815 aa10.22□□□□□ -0.77
LINC00534-201ENST00000517400 PPP1R37O75864 691 aa10.21□□□□□ -0.77
LINC00534-201ENST00000517400 MKRN3Q13064 507 aaKnown RBP10.2□□□□□ -0.78
LINC00534-201ENST00000517400 METRNQ9UJH8 293 aa10.19□□□□□ -0.78
LINC00534-201ENST00000517400 POTEJP0CG39 1038 aa10.18□□□□□ -0.78
LINC00534-201ENST00000517400 C7P10643 843 aa10.18□□□□□ -0.78
LINC00534-201ENST00000517400 CADPS2Q86UW7 1296 aa10.18□□□□□ -0.78
LINC00534-201ENST00000517400 SLC39A7Q92504 469 aa10.18□□□□□ -0.78
LINC00534-201ENST00000517400 OTUD5Q96G74 571 aa10.18□□□□□ -0.78
LINC00534-201ENST00000517400 MS4A4AQ96JQ5 239 aa10.18□□□□□ -0.78
LINC00534-201ENST00000517400 POTEFA5A3E0 1075 aa10.17□□□□□ -0.78
LINC00534-201ENST00000517400 ILDR1Q86SU0 546 aaPredicted RBP10.16□□□□□ -0.78
LINC00534-201ENST00000517400 TRIM35Q9UPQ4 493 aa10.15□□□□□ -0.78
LINC00534-201ENST00000517400 WDR70Q9NW82 654 aa10.12□□□□□ -0.79
LINC00534-201ENST00000517400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.79
LINC00534-201ENST00000517400 NBR1Q14596 966 aa10.08□□□□□ -0.8
LINC00534-201ENST00000517400 P3H3Q8IVL6 736 aa10.08□□□□□ -0.8
LINC00534-201ENST00000517400 COLQQ9Y215 455 aaPredicted RBP10.08□□□□□ -0.8
LINC00534-201ENST00000517400 IER5LQ5T953 404 aa10.06□□□□□ -0.8
LINC00534-201ENST00000517400 PDE4AP27815 886 aa10.05□□□□□ -0.8
LINC00534-201ENST00000517400 NCKAP5LQ9HCH0 1330 aa10.05□□□□□ -0.8
LINC00534-201ENST00000517400 IRX5P78411 483 aaPredicted RBP10.04□□□□□ -0.8
LINC00534-201ENST00000517400 PDCD7Q8N8D1 485 aaKnown RBP10.03□□□□□ -0.8
LINC00534-201ENST00000517400 KCNV2Q8TDN2 545 aa10.02□□□□□ -0.81
LINC00534-201ENST00000517400 CRISPLD2Q9H0B8 497 aa10.02□□□□□ -0.81
LINC00534-201ENST00000517400 OCEL1Q9H607 264 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms