RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 ATMINO43313 823 aaPredicted RBP3.09□□□□□ -1.91
SNORA40.17-201ENST00000517256 EMP3P54852 163 aa3.09□□□□□ -1.91
SNORA40.17-201ENST00000517256 PABPN1Q86U42 306 aaKnown RBP eCLIP3.09□□□□□ -1.91
SNORA40.17-201ENST00000517256 TMEM121BQ9BXQ6 578 aaPredicted RBP3.09□□□□□ -1.91
SNORA40.17-201ENST00000517256 SNPHO15079 494 aa3.08□□□□□ -1.92
SNORA40.17-201ENST00000517256 ASTLQ6HA08 431 aaPredicted RBP3.08□□□□□ -1.92
SNORA40.17-201ENST00000517256 FAM205CA6NFA0 338 aa3.05□□□□□ -1.92
SNORA40.17-201ENST00000517256 ATN1P54259 1190 aaPredicted RBP3.05□□□□□ -1.92
SNORA40.17-201ENST00000517256 MS4A3Q96HJ5 214 aa3.05□□□□□ -1.92
SNORA40.17-201ENST00000517256 MYT1LQ9UL68 1186 aa3.03□□□□□ -1.92
SNORA40.17-201ENST00000517256 SSUH2Q9Y2M2 353 aa3.03□□□□□ -1.92
SNORA40.17-201ENST00000517256 NPM1P06748 294 aaKnown RBP eCLIP3.02□□□□□ -1.93
SNORA40.17-201ENST00000517256 HS3ST6Q96QI5 342 aa3.02□□□□□ -1.93
SNORA40.17-201ENST00000517256 KRTAP3-3Q9BYR6 98 aa2.99□□□□□ -1.93
SNORA40.17-201ENST00000517256 KRTAP3-2Q9BYR7 98 aa2.99□□□□□ -1.93
SNORA40.17-201ENST00000517256 IRX2Q9BZI1 471 aaPredicted RBP2.99□□□□□ -1.93
SNORA40.17-201ENST00000517256 PLA2G2EQ9NZK7 142 aa2.99□□□□□ -1.93
SNORA40.17-201ENST00000517256 PLCG2P16885 1265 aa2.97□□□□□ -1.93
SNORA40.17-201ENST00000517256 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.97□□□□□ -1.93
SNORA40.17-201ENST00000517256 COLQQ9Y215 455 aaPredicted RBP2.97□□□□□ -1.93
SNORA40.17-201ENST00000517256 POTEFA5A3E0 1075 aa2.96□□□□□ -1.94
SNORA40.17-201ENST00000517256 TSPYL2Q9H2G4 693 aaPredicted RBP2.96□□□□□ -1.94
SNORA40.17-201ENST00000517256 BMP2KQ9NSY1 1161 aaPredicted RBP2.95□□□□□ -1.94
SNORA40.17-201ENST00000517256 CREBZFQ9NS37 354 aa2.94□□□□□ -1.94
SNORA40.17-201ENST00000517256 Q6ZNB5 142 aa2.93□□□□□ -1.94
SNORA40.17-201ENST00000517256 ERBB3P21860 1342 aa2.93□□□□□ -1.94
SNORA40.17-201ENST00000517256 TRIM35Q9UPQ4 493 aa2.92□□□□□ -1.94
SNORA40.17-201ENST00000517256 TIE1P35590 1138 aa2.91□□□□□ -1.94
SNORA40.17-201ENST00000517256 C3orf67Q6ZVT6 689 aa2.91□□□□□ -1.94
SNORA40.17-201ENST00000517256 STAG3Q9UJ98 1225 aa2.91□□□□□ -1.94
SNORA40.17-201ENST00000517256 PTGER2P43116 358 aa2.9□□□□□ -1.95
SNORA40.17-201ENST00000517256 IER5LQ5T953 404 aa2.9□□□□□ -1.95
SNORA40.17-201ENST00000517256 ANKRD13DQ6ZTN6 518 aa2.9□□□□□ -1.95
SNORA40.17-201ENST00000517256 ZNF710Q8N1W2 664 aa2.9□□□□□ -1.95
SNORA40.17-201ENST00000517256 POTEB3A0JP26 581 aa2.89□□□□□ -1.95
SNORA40.17-201ENST00000517256 POTEBQ6S5H4 581 aa2.89□□□□□ -1.95
SNORA40.17-201ENST00000517256 TTLL13PA6NNM8 815 aa2.88□□□□□ -1.95
SNORA40.17-201ENST00000517256 TRPC6Q9Y210 931 aa2.88□□□□□ -1.95
SNORA40.17-201ENST00000517256 MKRN4PQ13434 485 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.17-201ENST00000517256 FOXD4L1Q9NU39 408 aa2.86□□□□□ -1.95
SNORA40.17-201ENST00000517256 KCNA4P22459 653 aa2.85□□□□□ -1.95
SNORA40.17-201ENST00000517256 HCSTQ9UBK5 93 aa2.85□□□□□ -1.95
SNORA40.17-201ENST00000517256 MAP3K13O43283 966 aa2.84□□□□□ -1.95
SNORA40.17-201ENST00000517256 VARS2Q5ST30 1063 aaKnown RBP2.84□□□□□ -1.95
SNORA40.17-201ENST00000517256 KIF12Q96FN5 646 aa2.84□□□□□ -1.95
SNORA40.17-201ENST00000517256 G3V3G9 751 aa2.83□□□□□ -1.96
SNORA40.17-201ENST00000517256 DCAF8Q5TAQ9 597 aa2.83□□□□□ -1.96
SNORA40.17-201ENST00000517256 TMEM106CQ9BVX2 250 aa2.82□□□□□ -1.96
SNORA40.17-201ENST00000517256 OCEL1Q9H607 264 aa2.82□□□□□ -1.96
SNORA40.17-201ENST00000517256 RIMBP2O15034 1052 aa2.81□□□□□ -1.96
SNORA40.17-201ENST00000517256 PCDHB13Q9Y5F0 798 aa2.8□□□□□ -1.96
SNORA40.17-201ENST00000517256 CCDC61Q9Y6R9 512 aa2.8□□□□□ -1.96
SNORA40.17-201ENST00000517256 RGS20O76081 388 aa2.79□□□□□ -1.96
SNORA40.17-201ENST00000517256 GOLGA2Q08379 1002 aa2.79□□□□□ -1.96
SNORA40.17-201ENST00000517256 STAC3Q96MF2 364 aa2.79□□□□□ -1.96
SNORA40.17-201ENST00000517256 DOK7Q18PE1 504 aa2.78□□□□□ -1.96
SNORA40.17-201ENST00000517256 L3MBTL3Q96JM7 780 aaPredicted RBP2.78□□□□□ -1.96
SNORA40.17-201ENST00000517256 PLEKHG5O94827 1062 aa2.77□□□□□ -1.97
SNORA40.17-201ENST00000517256 ATXN8OSP0DMR3 200 aa2.77□□□□□ -1.97
SNORA40.17-201ENST00000517256 ZNF787Q6DD87 383 aa2.77□□□□□ -1.97
SNORA40.17-201ENST00000517256 ZNF687Q8N1G0 1237 aa2.77□□□□□ -1.97
SNORA40.17-201ENST00000517256 HOXB1P14653 301 aaPredicted RBP2.76□□□□□ -1.97
SNORA40.17-201ENST00000517256 IRX5P78411 483 aaPredicted RBP2.76□□□□□ -1.97
SNORA40.17-201ENST00000517256 TRAF7Q6Q0C0 670 aa2.76□□□□□ -1.97
SNORA40.17-201ENST00000517256 LSM11P83369 360 aaKnown RBP eCLIP2.73□□□□□ -1.97
SNORA40.17-201ENST00000517256 MKRN3Q13064 507 aaKnown RBP2.73□□□□□ -1.97
SNORA40.17-201ENST00000517256 LOC100996750A0A140TA64 210 aa2.72□□□□□ -1.97
SNORA40.17-201ENST00000517256 MNX1P50219 401 aaPredicted RBP2.72□□□□□ -1.97
SNORA40.17-201ENST00000517256 PTPN5P54829 565 aa2.72□□□□□ -1.97
SNORA40.17-201ENST00000517256 LAPTM4AQ15012 233 aa2.72□□□□□ -1.97
SNORA40.17-201ENST00000517256 ZNF775Q96BV0 537 aaPredicted RBP2.72□□□□□ -1.97
SNORA40.17-201ENST00000517256 KCTD12Q96CX2 325 aaKnown RBP2.72□□□□□ -1.97
SNORA40.17-201ENST00000517256 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
SNORA40.17-201ENST00000517256 GFRA3O60609 400 aa2.7□□□□□ -1.98
SNORA40.17-201ENST00000517256 IFNL1Q8IU54 200 aa2.7□□□□□ -1.98
SNORA40.17-201ENST00000517256 SGIP1Q9BQI5 828 aa2.7□□□□□ -1.98
SNORA40.17-201ENST00000517256 A0A0G2JS52 829 aa2.69□□□□□ -1.98
SNORA40.17-201ENST00000517256 HOXB3P14651 431 aaPredicted RBP2.68□□□□□ -1.98
SNORA40.17-201ENST00000517256 SLC4A1APQ9BWU0 796 aaKnown RBP2.68□□□□□ -1.98
SNORA40.17-201ENST00000517256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.68□□□□□ -1.98
SNORA40.17-201ENST00000517256 RASEFQ8IZ41 740 aa2.65□□□□□ -1.99
SNORA40.17-201ENST00000517256 STK17AQ9UEE5 414 aa2.65□□□□□ -1.99
SNORA40.17-201ENST00000517256 AXIN2Q9Y2T1 843 aa2.65□□□□□ -1.99
SNORA40.17-201ENST00000517256 GOLGA8CPA6NN73 597 aa2.64□□□□□ -1.99
SNORA40.17-201ENST00000517256 PBX2P40425 430 aa2.64□□□□□ -1.99
SNORA40.17-201ENST00000517256 SUZ12Q15022 739 aaKnown RBP2.64□□□□□ -1.99
SNORA40.17-201ENST00000517256 MIER1Q8N108 512 aa2.64□□□□□ -1.99
SNORA40.17-201ENST00000517256 ZSWIM6Q9HCJ5 1215 aa2.64□□□□□ -1.99
SNORA40.17-201ENST00000517256 ZNF316A6NFI3 1004 aaPredicted RBP2.63□□□□□ -1.99
SNORA40.17-201ENST00000517256 ADGRD1Q6QNK2 874 aa2.63□□□□□ -1.99
SNORA40.17-201ENST00000517256 ANO8Q9HCE9 1232 aaPredicted RBP2.63□□□□□ -1.99
SNORA40.17-201ENST00000517256 SPDYE4A6NLX3 237 aa2.62□□□□□ -1.99
SNORA40.17-201ENST00000517256 ARSIQ5FYB1 569 aa2.62□□□□□ -1.99
SNORA40.17-201ENST00000517256 PDCD7Q8N8D1 485 aaKnown RBP2.62□□□□□ -1.99
SNORA40.17-201ENST00000517256 FAM212AQ96EL1 285 aa2.62□□□□□ -1.99
SNORA40.17-201ENST00000517256 BOLA1Q9Y3E2 137 aa2.62□□□□□ -1.99
SNORA40.17-201ENST00000517256 FAM181BA6NEQ2 426 aa2.61□□□□□ -1.99
SNORA40.17-201ENST00000517256 INSM1Q01101 510 aaPredicted RBP2.61□□□□□ -1.99
SNORA40.17-201ENST00000517256 NRG2O14511 850 aaPredicted RBP2.6□□□□□ -1.99
SNORA40.17-201ENST00000517256 IFFO2Q5TF58 517 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms