RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 AEBP2Q6ZN18 517 aaPredicted RBP6.44□□□□□ -1.38
SNORA40.17-201ENST00000517256 CHIC1Q5VXU3 224 aa6.2□□□□□ -1.42
SNORA40.17-201ENST00000517256 POTEDQ86YR6 584 aa5.97□□□□□ -1.45
SNORA40.17-201ENST00000517256 SENP3Q9H4L4 574 aaPredicted RBP5.72□□□□□ -1.49
SNORA40.17-201ENST00000517256 PHF23Q9BUL5 403 aaPredicted RBP5.55□□□□□ -1.52
SNORA40.17-201ENST00000517256 FOXD1Q16676 465 aa5.32□□□□□ -1.56
SNORA40.17-201ENST00000517256 MSH5O43196 834 aa5.27□□□□□ -1.57
SNORA40.17-201ENST00000517256 PIAS4Q8N2W9 510 aaPredicted RBP4.98□□□□□ -1.61
SNORA40.17-201ENST00000517256 CACNB1Q02641 598 aaPredicted RBP4.93□□□□□ -1.62
SNORA40.17-201ENST00000517256 POTEHQ6S545 545 aa4.63□□□□□ -1.67
SNORA40.17-201ENST00000517256 ADRA2BP18089 450 aa4.58□□□□□ -1.68
SNORA40.17-201ENST00000517256 DCAF8L1A6NGE4 600 aa4.53□□□□□ -1.68
SNORA40.17-201ENST00000517256 PPP6R1Q9UPN7 881 aa4.53□□□□□ -1.68
SNORA40.17-201ENST00000517256 DMRT2Q9Y5R5 561 aa4.39□□□□□ -1.71
SNORA40.17-201ENST00000517256 PLPPR3Q6T4P5 718 aa4.38□□□□□ -1.71
SNORA40.17-201ENST00000517256 MAPK8IP2Q13387 824 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.17-201ENST00000517256 RNF39Q9H2S5 420 aa4.35□□□□□ -1.71
SNORA40.17-201ENST00000517256 C1QBPQ07021 282 aaKnown RBP4.32□□□□□ -1.72
SNORA40.17-201ENST00000517256 SCAF1Q9H7N4 1312 aaKnown RBP4.29□□□□□ -1.72
SNORA40.17-201ENST00000517256 PLSCR2Q9NRY7 297 aa4.23□□□□□ -1.73
SNORA40.17-201ENST00000517256 SP7Q8TDD2 431 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.17-201ENST00000517256 CAPN15O75808 1086 aa4.01□□□□□ -1.77
SNORA40.17-201ENST00000517256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.01□□□□□ -1.77
SNORA40.17-201ENST00000517256 HOXD11P31277 338 aaPredicted RBP3.97□□□□□ -1.77
SNORA40.17-201ENST00000517256 CHRDL2Q6WN34 429 aa3.96□□□□□ -1.78
SNORA40.17-201ENST00000517256 HAX1O00165 279 aa3.93□□□□□ -1.78
SNORA40.17-201ENST00000517256 DSG3P32926 999 aa3.93□□□□□ -1.78
SNORA40.17-201ENST00000517256 RBM42Q9BTD8 480 aaKnown RBP3.88□□□□□ -1.79
SNORA40.17-201ENST00000517256 DNAJC5BQ9UF47 199 aa3.88□□□□□ -1.79
SNORA40.17-201ENST00000517256 RNF216Q9NWF9 866 aaPredicted RBP3.87□□□□□ -1.79
SNORA40.17-201ENST00000517256 LHX8Q68G74 356 aa3.86□□□□□ -1.79
SNORA40.17-201ENST00000517256 SPINK5Q9NQ38 1064 aaPredicted RBP3.85□□□□□ -1.79
SNORA40.17-201ENST00000517256 ABCB7O75027 752 aa3.83□□□□□ -1.8
SNORA40.17-201ENST00000517256 TRHP20396 242 aaPredicted RBP3.82□□□□□ -1.8
SNORA40.17-201ENST00000517256 CNKSR2Q8WXI2 1034 aa3.81□□□□□ -1.8
SNORA40.17-201ENST00000517256 PPP4R3CPQ6ZMV5 832 aa3.76□□□□□ -1.81
SNORA40.17-201ENST00000517256 APLP2Q06481 763 aa3.73□□□□□ -1.81
SNORA40.17-201ENST00000517256 PIP4P2Q8N4L2 257 aa3.72□□□□□ -1.81
SNORA40.17-201ENST00000517256 ZNF219Q9P2Y4 722 aaPredicted RBP3.72□□□□□ -1.81
SNORA40.17-201ENST00000517256 U3KPZ7 1027 aaPredicted RBP3.7□□□□□ -1.82
SNORA40.17-201ENST00000517256 POTEMA6NI47 508 aa3.69□□□□□ -1.82
SNORA40.17-201ENST00000517256 POTEGQ6S5H5 508 aa3.65□□□□□ -1.83
SNORA40.17-201ENST00000517256 EVX2Q03828 476 aa3.64□□□□□ -1.83
SNORA40.17-201ENST00000517256 AKT1S1Q96B36 256 aa3.62□□□□□ -1.83
SNORA40.17-201ENST00000517256 GABBR2O75899 941 aa3.61□□□□□ -1.83
SNORA40.17-201ENST00000517256 PCDH10Q9P2E7 1040 aa3.61□□□□□ -1.83
SNORA40.17-201ENST00000517256 REM2Q8IYK8 340 aaPredicted RBP3.58□□□□□ -1.84
SNORA40.17-201ENST00000517256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.55□□□□□ -1.84
SNORA40.17-201ENST00000517256 PITPNM1O00562 1244 aa3.55□□□□□ -1.84
SNORA40.17-201ENST00000517256 FXR2P51116 673 aaKnown RBP eCLIP3.55□□□□□ -1.84
SNORA40.17-201ENST00000517256 HNRNPUL2Q1KMD3 747 aaKnown RBP3.55□□□□□ -1.84
SNORA40.17-201ENST00000517256 NCBP3Q53F19 620 aaKnown RBP3.55□□□□□ -1.84
SNORA40.17-201ENST00000517256 DCBLD2Q96PD2 775 aa3.54□□□□□ -1.84
SNORA40.17-201ENST00000517256 PRKAR2AP13861 404 aaKnown RBP3.51□□□□□ -1.85
SNORA40.17-201ENST00000517256 POLA2Q14181 598 aa3.51□□□□□ -1.85
SNORA40.17-201ENST00000517256 FAM163AQ96GL9 167 aaPredicted RBP3.48□□□□□ -1.85
SNORA40.17-201ENST00000517256 C19orf67A6NJJ6 358 aa3.47□□□□□ -1.85
SNORA40.17-201ENST00000517256 SAMD1Q6SPF0 538 aaPredicted RBP3.47□□□□□ -1.85
SNORA40.17-201ENST00000517256 CLEC11AQ9Y240 323 aa3.47□□□□□ -1.85
SNORA40.17-201ENST00000517256 OTUD5Q96G74 571 aa3.45□□□□□ -1.86
SNORA40.17-201ENST00000517256 ZBTB12Q9Y330 459 aaPredicted RBP3.43□□□□□ -1.86
SNORA40.17-201ENST00000517256 POTEIP0CG38 1075 aa3.42□□□□□ -1.86
SNORA40.17-201ENST00000517256 OSCARQ8IYS5 282 aa3.42□□□□□ -1.86
SNORA40.17-201ENST00000517256 CDAN1Q8IWY9 1227 aa3.41□□□□□ -1.86
SNORA40.17-201ENST00000517256 CD44P16070 742 aaKnown RBP3.38□□□□□ -1.87
SNORA40.17-201ENST00000517256 NPM3O75607 178 aaKnown RBP3.37□□□□□ -1.87
SNORA40.17-201ENST00000517256 CLCN6P51797 869 aa3.37□□□□□ -1.87
SNORA40.17-201ENST00000517256 CHADLQ6NUI6 762 aa3.36□□□□□ -1.87
SNORA40.17-201ENST00000517256 MAMSTRQ6ZN01 415 aa3.35□□□□□ -1.87
SNORA40.17-201ENST00000517256 SPDYE1Q8NFV5 336 aaPredicted RBP3.35□□□□□ -1.87
SNORA40.17-201ENST00000517256 MMRN1Q13201 1228 aa3.34□□□□□ -1.87
SNORA40.17-201ENST00000517256 SCUBE2Q9NQ36 999 aa3.34□□□□□ -1.87
SNORA40.17-201ENST00000517256 POTEB2H3BUK9 544 aa3.31□□□□□ -1.88
SNORA40.17-201ENST00000517256 PRR29P0C7W0 189 aa3.29□□□□□ -1.88
SNORA40.17-201ENST00000517256 SPNS2Q8IVW8 549 aa3.29□□□□□ -1.88
SNORA40.17-201ENST00000517256 SLC4A2P04920 1241 aa3.28□□□□□ -1.88
SNORA40.17-201ENST00000517256 ZRANB1Q9UGI0 708 aa3.28□□□□□ -1.88
SNORA40.17-201ENST00000517256 METRNQ9UJH8 293 aa3.26□□□□□ -1.89
SNORA40.17-201ENST00000517256 LCE2DQ5TA82 110 aaPredicted RBP3.25□□□□□ -1.89
SNORA40.17-201ENST00000517256 GALR2O43603 387 aaPredicted RBP3.24□□□□□ -1.89
SNORA40.17-201ENST00000517256 PAK3O75914 559 aaPredicted RBP3.23□□□□□ -1.89
SNORA40.17-201ENST00000517256 SPDYE2BA6NHP3 402 aa3.22□□□□□ -1.89
SNORA40.17-201ENST00000517256 SPDYE6P0CI01 402 aa3.22□□□□□ -1.89
SNORA40.17-201ENST00000517256 SPDYE2Q495Y8 402 aa3.22□□□□□ -1.89
SNORA40.17-201ENST00000517256 SLC39A7Q92504 469 aa3.21□□□□□ -1.9
SNORA40.17-201ENST00000517256 FARP1Q9Y4F1 1045 aaPredicted RBP3.21□□□□□ -1.9
SNORA40.17-201ENST00000517256 C7P10643 843 aa3.2□□□□□ -1.9
SNORA40.17-201ENST00000517256 ZNF579Q8NAF0 562 aaKnown RBP3.2□□□□□ -1.9
SNORA40.17-201ENST00000517256 ATF5Q9Y2D1 282 aaPredicted RBP3.2□□□□□ -1.9
SNORA40.17-201ENST00000517256 MYCNP04198 464 aaPredicted RBP3.19□□□□□ -1.9
SNORA40.17-201ENST00000517256 FBLN2P98095 1184 aa3.18□□□□□ -1.9
SNORA40.17-201ENST00000517256 ZNF692Q9BU19 519 aaPredicted RBP3.18□□□□□ -1.9
SNORA40.17-201ENST00000517256 ST18O60284 1047 aa3.16□□□□□ -1.9
SNORA40.17-201ENST00000517256 PELP1Q8IZL8 1130 aaKnown RBP3.16□□□□□ -1.9
SNORA40.17-201ENST00000517256 SEC24BO95487 1268 aa3.15□□□□□ -1.91
SNORA40.17-201ENST00000517256 POTEJP0CG39 1038 aa3.15□□□□□ -1.91
SNORA40.17-201ENST00000517256 SLAIN1Q8ND83 568 aa3.14□□□□□ -1.91
SNORA40.17-201ENST00000517256 PHF12Q96QT6 1004 aa3.13□□□□□ -1.91
SNORA40.17-201ENST00000517256 MARVELD3Q96A59 401 aa3.12□□□□□ -1.91
SNORA40.17-201ENST00000517256 RNF166Q96A37 237 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms