RNA–Protein interactions for RNA: ENST00000517211.2

RN7SKP40-201, Transcript of RNA, 7SK small nuclear pseudogene 40, humanhuman

BASIC

Gene RN7SKP40, Length 242 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP40-201ENST00000517211 C7P10643 843 aa10.95□□□□□ -0.66
RN7SKP40-201ENST00000517211 CDAN1Q8IWY9 1227 aa10.95□□□□□ -0.66
RN7SKP40-201ENST00000517211 SLC39A7Q92504 469 aa10.94□□□□□ -0.66
RN7SKP40-201ENST00000517211 PAK3O75914 559 aaPredicted RBP10.9□□□□□ -0.66
RN7SKP40-201ENST00000517211 ATN1P54259 1190 aaPredicted RBP10.9□□□□□ -0.66
RN7SKP40-201ENST00000517211 MAMSTRQ6ZN01 415 aa10.9□□□□□ -0.66
RN7SKP40-201ENST00000517211 MNX1P50219 401 aaPredicted RBP10.89□□□□□ -0.67
RN7SKP40-201ENST00000517211 SCUBE2Q9NQ36 999 aa10.86□□□□□ -0.67
RN7SKP40-201ENST00000517211 TRPC6Q9Y210 931 aa10.84□□□□□ -0.67
RN7SKP40-201ENST00000517211 COLQQ9Y215 455 aaPredicted RBP10.77□□□□□ -0.69
RN7SKP40-201ENST00000517211 MMRN1Q13201 1228 aa10.76□□□□□ -0.69
RN7SKP40-201ENST00000517211 BMP2KQ9NSY1 1161 aaPredicted RBP10.75□□□□□ -0.69
RN7SKP40-201ENST00000517211 STAG3Q9UJ98 1225 aa10.75□□□□□ -0.69
RN7SKP40-201ENST00000517211 TSPYL2Q9H2G4 693 aaPredicted RBP10.74□□□□□ -0.69
RN7SKP40-201ENST00000517211 NPM1P06748 294 aaKnown RBP eCLIP10.73□□□□□ -0.69
RN7SKP40-201ENST00000517211 ST18O60284 1047 aa10.72□□□□□ -0.69
RN7SKP40-201ENST00000517211 SPNS2Q8IVW8 549 aa10.71□□□□□ -0.69
RN7SKP40-201ENST00000517211 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
RN7SKP40-201ENST00000517211 KIF12Q96FN5 646 aa10.66□□□□□ -0.7
RN7SKP40-201ENST00000517211 SLAIN1Q8ND83 568 aa10.6□□□□□ -0.71
RN7SKP40-201ENST00000517211 MAP3K13O43283 966 aa10.59□□□□□ -0.71
RN7SKP40-201ENST00000517211 SEC24BO95487 1268 aa10.59□□□□□ -0.71
RN7SKP40-201ENST00000517211 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
RN7SKP40-201ENST00000517211 TTLL13PA6NNM8 815 aa10.56□□□□□ -0.72
RN7SKP40-201ENST00000517211 MARVELD3Q96A59 401 aa10.54□□□□□ -0.72
RN7SKP40-201ENST00000517211 TIE1P35590 1138 aa10.53□□□□□ -0.72
RN7SKP40-201ENST00000517211 TRIM35Q9UPQ4 493 aa10.5□□□□□ -0.73
RN7SKP40-201ENST00000517211 RASEFQ8IZ41 740 aa10.44□□□□□ -0.74
RN7SKP40-201ENST00000517211 POTEB3A0JP26 581 aa10.41□□□□□ -0.74
RN7SKP40-201ENST00000517211 POTEBQ6S5H4 581 aa10.41□□□□□ -0.74
RN7SKP40-201ENST00000517211 IER5LQ5T953 404 aa10.37□□□□□ -0.75
RN7SKP40-201ENST00000517211 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
RN7SKP40-201ENST00000517211 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
RN7SKP40-201ENST00000517211 TMEM121BQ9BXQ6 578 aaPredicted RBP10.34□□□□□ -0.75
RN7SKP40-201ENST00000517211 IRX5P78411 483 aaPredicted RBP10.31□□□□□ -0.76
RN7SKP40-201ENST00000517211 IFNL1Q8IU54 200 aa10.31□□□□□ -0.76
RN7SKP40-201ENST00000517211 PCDHB13Q9Y5F0 798 aa10.31□□□□□ -0.76
RN7SKP40-201ENST00000517211 PLCG2P16885 1265 aa10.3□□□□□ -0.76
RN7SKP40-201ENST00000517211 TMEM106CQ9BVX2 250 aa10.28□□□□□ -0.76
RN7SKP40-201ENST00000517211 EMP3P54852 163 aa10.25□□□□□ -0.77
RN7SKP40-201ENST00000517211 CSRNP3Q8WYN3 585 aa10.25□□□□□ -0.77
RN7SKP40-201ENST00000517211 HS3ST6Q96QI5 342 aa10.25□□□□□ -0.77
RN7SKP40-201ENST00000517211 FAM205CA6NFA0 338 aa10.24□□□□□ -0.77
RN7SKP40-201ENST00000517211 SNPHO15079 494 aa10.2□□□□□ -0.78
RN7SKP40-201ENST00000517211 MIER1Q8N108 512 aa10.19□□□□□ -0.78
RN7SKP40-201ENST00000517211 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.19□□□□□ -0.78
RN7SKP40-201ENST00000517211 SGIP1Q9BQI5 828 aa10.17□□□□□ -0.78
RN7SKP40-201ENST00000517211 OCEL1Q9H607 264 aa10.17□□□□□ -0.78
RN7SKP40-201ENST00000517211 PROM2Q8N271 834 aa10.16□□□□□ -0.78
RN7SKP40-201ENST00000517211 NUBP1P53384 320 aa10.11□□□□□ -0.79
RN7SKP40-201ENST00000517211 PDCD7Q8N8D1 485 aaKnown RBP10.05□□□□□ -0.8
RN7SKP40-201ENST00000517211 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
RN7SKP40-201ENST00000517211 PCDHB8Q9UN66 801 aa10.03□□□□□ -0.8
RN7SKP40-201ENST00000517211 PLEKHG5O94827 1062 aa10.01□□□□□ -0.81
RN7SKP40-201ENST00000517211 C3orf67Q6ZVT6 689 aa10□□□□□ -0.81
RN7SKP40-201ENST00000517211 PYGBP11216 843 aa9.98□□□□□ -0.81
RN7SKP40-201ENST00000517211 PLCD3Q8N3E9 789 aa9.97□□□□□ -0.81
RN7SKP40-201ENST00000517211 HOXB3P14651 431 aaPredicted RBP9.96□□□□□ -0.82
RN7SKP40-201ENST00000517211 MYT1LQ9UL68 1186 aa9.93□□□□□ -0.82
RN7SKP40-201ENST00000517211 DPY19L2Q6NUT2 758 aa9.92□□□□□ -0.82
RN7SKP40-201ENST00000517211 FAM212AQ96EL1 285 aa9.91□□□□□ -0.82
RN7SKP40-201ENST00000517211 ERBB3P21860 1342 aa9.88□□□□□ -0.83
RN7SKP40-201ENST00000517211 L3MBTL3Q96JM7 780 aaPredicted RBP9.87□□□□□ -0.83
RN7SKP40-201ENST00000517211 HOXB1P14653 301 aaPredicted RBP9.86□□□□□ -0.83
RN7SKP40-201ENST00000517211 VARS2Q5ST30 1063 aaKnown RBP9.85□□□□□ -0.83
RN7SKP40-201ENST00000517211 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.85□□□□□ -0.83
RN7SKP40-201ENST00000517211 DCAF8Q5TAQ9 597 aa9.84□□□□□ -0.83
RN7SKP40-201ENST00000517211 MKRN3Q13064 507 aaKnown RBP9.81□□□□□ -0.84
RN7SKP40-201ENST00000517211 ZNF710Q8N1W2 664 aa9.79□□□□□ -0.84
RN7SKP40-201ENST00000517211 GOLGA2Q08379 1002 aa9.76□□□□□ -0.85
RN7SKP40-201ENST00000517211 ZBTB47Q9UFB7 747 aaPredicted RBP9.75□□□□□ -0.85
RN7SKP40-201ENST00000517211 ILDR1Q86SU0 546 aaPredicted RBP9.74□□□□□ -0.85
RN7SKP40-201ENST00000517211 EHMT2Q96KQ7 1210 aa9.74□□□□□ -0.85
RN7SKP40-201ENST00000517211 ANKRD13DQ6ZTN6 518 aa9.72□□□□□ -0.85
RN7SKP40-201ENST00000517211 ZNF687Q8N1G0 1237 aa9.72□□□□□ -0.85
RN7SKP40-201ENST00000517211 BOLA1Q9Y3E2 137 aa9.71□□□□□ -0.86
RN7SKP40-201ENST00000517211 PSEN1P49768 467 aa9.68□□□□□ -0.86
RN7SKP40-201ENST00000517211 DOK7Q18PE1 504 aa9.68□□□□□ -0.86
RN7SKP40-201ENST00000517211 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
RN7SKP40-201ENST00000517211 TMEM92Q6UXU6 159 aa9.65□□□□□ -0.86
RN7SKP40-201ENST00000517211 GPR153Q6NV75 609 aa9.63□□□□□ -0.87
RN7SKP40-201ENST00000517211 ZNF467Q7Z7K2 595 aaPredicted RBP9.61□□□□□ -0.87
RN7SKP40-201ENST00000517211 KHSRPQ92945 711 aaKnown RBP eCLIP9.61□□□□□ -0.87
RN7SKP40-201ENST00000517211 CABP2Q9NPB3 220 aa9.61□□□□□ -0.87
RN7SKP40-201ENST00000517211 G3V3G9 751 aa9.58□□□□□ -0.88
RN7SKP40-201ENST00000517211 PTGER2P43116 358 aa9.57□□□□□ -0.88
RN7SKP40-201ENST00000517211 ARSIQ5FYB1 569 aa9.57□□□□□ -0.88
RN7SKP40-201ENST00000517211 POTEEQ6S8J3 1075 aa9.56□□□□□ -0.88
RN7SKP40-201ENST00000517211 RIMBP2O15034 1052 aa9.55□□□□□ -0.88
RN7SKP40-201ENST00000517211 LSM11P83369 360 aaKnown RBP eCLIP9.55□□□□□ -0.88
RN7SKP40-201ENST00000517211 AXIN2Q9Y2T1 843 aa9.51□□□□□ -0.89
RN7SKP40-201ENST00000517211 CHRM1P11229 460 aaPredicted RBP9.48□□□□□ -0.89
RN7SKP40-201ENST00000517211 PDAP1Q13442 181 aaKnown RBP9.48□□□□□ -0.89
RN7SKP40-201ENST00000517211 ZSWIM6Q9HCJ5 1215 aa9.48□□□□□ -0.89
RN7SKP40-201ENST00000517211 ZNF316A6NFI3 1004 aaPredicted RBP9.47□□□□□ -0.89
RN7SKP40-201ENST00000517211 HCSTQ9UBK5 93 aa9.45□□□□□ -0.9
RN7SKP40-201ENST00000517211 GSE1Q14687 1217 aa9.44□□□□□ -0.9
RN7SKP40-201ENST00000517211 MICALL2Q8IY33 904 aa9.44□□□□□ -0.9
RN7SKP40-201ENST00000517211 EFCAB3Q8N7B9 438 aa9.43□□□□□ -0.9
RN7SKP40-201ENST00000517211 KLHL34Q8N239 644 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms