RNA–Protein interactions for RNA: ENST00000516759.1

RNU7-28P-201, Transcript of RNA, U7 small nuclear 28 pseudogene, humanhuman

BASIC

Gene RNU7-28P, Length 62 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU7-28P-201ENST00000516759 ECM2O94769 699 aaPredicted RBP4.62□□□□□ -1.67
RNU7-28P-201ENST00000516759 PYGBP11216 843 aa4.62□□□□□ -1.67
RNU7-28P-201ENST00000516759 PHF12Q96QT6 1004 aa4.61□□□□□ -1.67
RNU7-28P-201ENST00000516759 CD44P16070 742 aaKnown RBP4.6□□□□□ -1.67
RNU7-28P-201ENST00000516759 POTEHQ6S545 545 aa4.59□□□□□ -1.67
RNU7-28P-201ENST00000516759 FAM212AQ96EL1 285 aa4.59□□□□□ -1.67
RNU7-28P-201ENST00000516759 ZRANB1Q9UGI0 708 aa4.59□□□□□ -1.67
RNU7-28P-201ENST00000516759 TRPC6Q9Y210 931 aa4.59□□□□□ -1.67
RNU7-28P-201ENST00000516759 MAP3K13O43283 966 aa4.58□□□□□ -1.68
RNU7-28P-201ENST00000516759 CHRM1P11229 460 aaPredicted RBP4.58□□□□□ -1.68
RNU7-28P-201ENST00000516759 GSE1Q14687 1217 aa4.58□□□□□ -1.68
RNU7-28P-201ENST00000516759 KIF12Q96FN5 646 aa4.58□□□□□ -1.68
RNU7-28P-201ENST00000516759 PCDHB8Q9UN66 801 aa4.58□□□□□ -1.68
RNU7-28P-201ENST00000516759 PCDHB13Q9Y5F0 798 aa4.58□□□□□ -1.68
RNU7-28P-201ENST00000516759 HAX1O00165 279 aa4.56□□□□□ -1.68
RNU7-28P-201ENST00000516759 IFNL1Q8IU54 200 aa4.56□□□□□ -1.68
RNU7-28P-201ENST00000516759 ZNF579Q8NAF0 562 aaKnown RBP4.54□□□□□ -1.68
RNU7-28P-201ENST00000516759 MS4A3Q96HJ5 214 aa4.54□□□□□ -1.68
RNU7-28P-201ENST00000516759 RIOK3O14730 519 aaKnown RBP4.53□□□□□ -1.68
RNU7-28P-201ENST00000516759 GALR2O43603 387 aaPredicted RBP4.53□□□□□ -1.68
RNU7-28P-201ENST00000516759 DCAF8L2P0C7V8 631 aa4.53□□□□□ -1.68
RNU7-28P-201ENST00000516759 NKX1-1Q15270 411 aaPredicted RBP4.53□□□□□ -1.68
RNU7-28P-201ENST00000516759 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.52□□□□□ -1.69
RNU7-28P-201ENST00000516759 CHGAP10645 457 aaKnown RBP4.52□□□□□ -1.69
RNU7-28P-201ENST00000516759 TRIM41Q8WV44 630 aa4.52□□□□□ -1.69
RNU7-28P-201ENST00000516759 ZFP91Q96JP5 570 aaPredicted RBP4.52□□□□□ -1.69
RNU7-28P-201ENST00000516759 GABBR2O75899 941 aa4.49□□□□□ -1.69
RNU7-28P-201ENST00000516759 PAK3O75914 559 aaPredicted RBP4.49□□□□□ -1.69
RNU7-28P-201ENST00000516759 PSEN1P49768 467 aa4.49□□□□□ -1.69
RNU7-28P-201ENST00000516759 SGIP1Q9BQI5 828 aa4.49□□□□□ -1.69
RNU7-28P-201ENST00000516759 VGFO15240 615 aaPredicted RBP4.48□□□□□ -1.69
RNU7-28P-201ENST00000516759 POTEIP0CG38 1075 aa4.48□□□□□ -1.69
RNU7-28P-201ENST00000516759 HS6ST3Q8IZP7 471 aa4.48□□□□□ -1.69
RNU7-28P-201ENST00000516759 BCL11BQ9C0K0 894 aaPredicted RBP4.48□□□□□ -1.69
RNU7-28P-201ENST00000516759 STK25O00506 426 aa4.47□□□□□ -1.69
RNU7-28P-201ENST00000516759 PELP1Q8IZL8 1130 aaKnown RBP4.47□□□□□ -1.69
RNU7-28P-201ENST00000516759 STK24Q9Y6E0 443 aa4.47□□□□□ -1.69
RNU7-28P-201ENST00000516759 PDAP1Q13442 181 aaKnown RBP4.46□□□□□ -1.7
RNU7-28P-201ENST00000516759 ZNF467Q7Z7K2 595 aaPredicted RBP4.46□□□□□ -1.7
RNU7-28P-201ENST00000516759 BMP2KQ9NSY1 1161 aaPredicted RBP4.46□□□□□ -1.7
RNU7-28P-201ENST00000516759 GTPBP6O43824 516 aaPredicted RBP4.45□□□□□ -1.7
RNU7-28P-201ENST00000516759 BBXQ8WY36 941 aaPredicted RBP4.45□□□□□ -1.7
RNU7-28P-201ENST00000516759 DNAJC5Q9H3Z4 198 aa4.45□□□□□ -1.7
RNU7-28P-201ENST00000516759 TTLL13PA6NNM8 815 aa4.44□□□□□ -1.7
RNU7-28P-201ENST00000516759 ATMINO43313 823 aaPredicted RBP4.44□□□□□ -1.7
RNU7-28P-201ENST00000516759 ATN1P54259 1190 aaPredicted RBP4.44□□□□□ -1.7
RNU7-28P-201ENST00000516759 EFCAB3Q8N7B9 438 aa4.44□□□□□ -1.7
RNU7-28P-201ENST00000516759 TMEM106CQ9BVX2 250 aa4.44□□□□□ -1.7
RNU7-28P-201ENST00000516759 PPP1R37O75864 691 aa4.43□□□□□ -1.7
RNU7-28P-201ENST00000516759 PLCB2Q00722 1185 aa4.43□□□□□ -1.7
RNU7-28P-201ENST00000516759 PAXIP1Q6ZW49 1069 aaPredicted RBP4.43□□□□□ -1.7
RNU7-28P-201ENST00000516759 SP7Q8TDD2 431 aaPredicted RBP4.43□□□□□ -1.7
RNU7-28P-201ENST00000516759 MFRPQ9BY79 579 aa4.43□□□□□ -1.7
RNU7-28P-201ENST00000516759 CABP2Q9NPB3 220 aa4.43□□□□□ -1.7
RNU7-28P-201ENST00000516759 POTEFA5A3E0 1075 aa4.42□□□□□ -1.7
RNU7-28P-201ENST00000516759 FBXO22Q8NEZ5 403 aa4.42□□□□□ -1.7
RNU7-28P-201ENST00000516759 MS4A4AQ96JQ5 239 aa4.42□□□□□ -1.7
RNU7-28P-201ENST00000516759 CFAP44Q96MT7 982 aa4.42□□□□□ -1.7
RNU7-28P-201ENST00000516759 TSHZ2Q9NRE2 1034 aa4.42□□□□□ -1.7
RNU7-28P-201ENST00000516759 PHF8Q9UPP1 1060 aa4.42□□□□□ -1.7
RNU7-28P-201ENST00000516759 TIE1P35590 1138 aa4.41□□□□□ -1.7
RNU7-28P-201ENST00000516759 ASTLQ6HA08 431 aaPredicted RBP4.41□□□□□ -1.7
RNU7-28P-201ENST00000516759 DPY19L2Q6NUT2 758 aa4.41□□□□□ -1.7
RNU7-28P-201ENST00000516759 TRIM35Q9UPQ4 493 aa4.4□□□□□ -1.71
RNU7-28P-201ENST00000516759 ILDR1Q86SU0 546 aaPredicted RBP4.39□□□□□ -1.71
RNU7-28P-201ENST00000516759 COLQQ9Y215 455 aaPredicted RBP4.39□□□□□ -1.71
RNU7-28P-201ENST00000516759 KDM2AQ9Y2K7 1162 aa4.39□□□□□ -1.71
RNU7-28P-201ENST00000516759 CADPS2Q86UW7 1296 aa4.38□□□□□ -1.71
RNU7-28P-201ENST00000516759 SPRYD3Q8NCJ5 442 aa4.38□□□□□ -1.71
RNU7-28P-201ENST00000516759 PDCD7Q8N8D1 485 aaKnown RBP4.37□□□□□ -1.71
RNU7-28P-201ENST00000516759 SLC24A1O60721 1099 aa4.36□□□□□ -1.71
RNU7-28P-201ENST00000516759 IRX5P78411 483 aaPredicted RBP4.36□□□□□ -1.71
RNU7-28P-201ENST00000516759 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.36□□□□□ -1.71
RNU7-28P-201ENST00000516759 TAOK2Q9UL54 1235 aa4.36□□□□□ -1.71
RNU7-28P-201ENST00000516759 POTEB2H3BUK9 544 aa4.35□□□□□ -1.71
RNU7-28P-201ENST00000516759 POTEJP0CG39 1038 aa4.35□□□□□ -1.71
RNU7-28P-201ENST00000516759 HAP1P54257 671 aaPredicted RBP4.35□□□□□ -1.71
RNU7-28P-201ENST00000516759 SOX12O15370 315 aa4.34□□□□□ -1.71
RNU7-28P-201ENST00000516759 CLCN6P51797 869 aa4.34□□□□□ -1.71
RNU7-28P-201ENST00000516759 DCBLD2Q96PD2 775 aa4.34□□□□□ -1.71
RNU7-28P-201ENST00000516759 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.34□□□□□ -1.71
RNU7-28P-201ENST00000516759 NLRP6P59044 892 aa4.33□□□□□ -1.72
RNU7-28P-201ENST00000516759 MKRN3Q13064 507 aaKnown RBP4.32□□□□□ -1.72
RNU7-28P-201ENST00000516759 METRNQ9UJH8 293 aa4.32□□□□□ -1.72
RNU7-28P-201ENST00000516759 TMEM92Q6UXU6 159 aa4.31□□□□□ -1.72
RNU7-28P-201ENST00000516759 GOLGA2Q08379 1002 aa4.3□□□□□ -1.72
RNU7-28P-201ENST00000516759 OCEL1Q9H607 264 aa4.3□□□□□ -1.72
RNU7-28P-201ENST00000516759 NCKAP5LQ9HCH0 1330 aa4.29□□□□□ -1.72
RNU7-28P-201ENST00000516759 IER5LQ5T953 404 aa4.29□□□□□ -1.72
RNU7-28P-201ENST00000516759 C7P10643 843 aa4.28□□□□□ -1.72
RNU7-28P-201ENST00000516759 MICALL2Q8IY33 904 aa4.28□□□□□ -1.72
RNU7-28P-201ENST00000516759 SLC39A7Q92504 469 aa4.28□□□□□ -1.72
RNU7-28P-201ENST00000516759 TMEM121BQ9BXQ6 578 aaPredicted RBP4.28□□□□□ -1.72
RNU7-28P-201ENST00000516759 PLCG2P16885 1265 aa4.26□□□□□ -1.73
RNU7-28P-201ENST00000516759 VSIG10Q8N0Z9 540 aa4.26□□□□□ -1.73
RNU7-28P-201ENST00000516759 KIF3CO14782 793 aa4.25□□□□□ -1.73
RNU7-28P-201ENST00000516759 SEC24BO95487 1268 aa4.25□□□□□ -1.73
RNU7-28P-201ENST00000516759 CRISPLD2Q9H0B8 497 aa4.25□□□□□ -1.73
RNU7-28P-201ENST00000516759 BOLA1Q9Y3E2 137 aa4.25□□□□□ -1.73
RNU7-28P-201ENST00000516759 C2orf72A6NCS6 295 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms