RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 RBM33Q96EV2 1170 aaKnown RBP7.47□□□□□ -1.21
SCARNA13-201ENST00000516672 KIF21BO75037 1637 aa7.47□□□□□ -1.21
SCARNA13-201ENST00000516672 ADAMTSL3P82987 1691 aa7.47□□□□□ -1.21
SCARNA13-201ENST00000516672 DMRT2Q9Y5R5 561 aa7.46□□□□□ -1.22
SCARNA13-201ENST00000516672 SENP3-EIF4A1A0A087X0R7 540 aa7.45□□□□□ -1.22
SCARNA13-201ENST00000516672 POTEAQ6S8J7 498 aa7.44□□□□□ -1.22
SCARNA13-201ENST00000516672 DCAF1Q9Y4B6 1507 aa7.43□□□□□ -1.22
SCARNA13-201ENST00000516672 SCAF1Q9H7N4 1312 aaKnown RBP7.42□□□□□ -1.22
SCARNA13-201ENST00000516672 YEATS2Q9ULM3 1422 aa7.42□□□□□ -1.22
SCARNA13-201ENST00000516672 CEP170Q5SW79 1584 aa7.41□□□□□ -1.22
SCARNA13-201ENST00000516672 STRCQ7RTU9 1775 aa7.38□□□□□ -1.23
SCARNA13-201ENST00000516672 TARBP1Q13395 1621 aaKnown RBP7.38□□□□□ -1.23
SCARNA13-201ENST00000516672 MADDQ8WXG6 1647 aa7.38□□□□□ -1.23
SCARNA13-201ENST00000516672 PLPPR3Q6T4P5 718 aa7.38□□□□□ -1.23
SCARNA13-201ENST00000516672 PIP4K2BP78356 416 aa7.37□□□□□ -1.23
SCARNA13-201ENST00000516672 PEG3Q9GZU2 1588 aa7.36□□□□□ -1.23
SCARNA13-201ENST00000516672 YY1P25490 414 aa7.35□□□□□ -1.23
SCARNA13-201ENST00000516672 TOPBP1Q92547 1522 aa7.35□□□□□ -1.23
SCARNA13-201ENST00000516672 MAGI1Q96QZ7 1491 aaPredicted RBP7.35□□□□□ -1.23
SCARNA13-201ENST00000516672 CFTRP13569 1480 aa7.34□□□□□ -1.23
SCARNA13-201ENST00000516672 SETBP1Q9Y6X0 1596 aa7.33□□□□□ -1.24
SCARNA13-201ENST00000516672 CFAP43Q8NDM7 1665 aa7.33□□□□□ -1.24
SCARNA13-201ENST00000516672 ADCY10Q96PN6 1610 aa7.33□□□□□ -1.24
SCARNA13-201ENST00000516672 TDRD9Q8NDG6 1382 aaKnown RBP7.33□□□□□ -1.24
SCARNA13-201ENST00000516672 RIMS1Q86UR5 1692 aaKnown RBP7.32□□□□□ -1.24
SCARNA13-201ENST00000516672 GLI2P10070 1586 aa7.31□□□□□ -1.24
SCARNA13-201ENST00000516672 TEX14Q8IWB6 1497 aa7.3□□□□□ -1.24
SCARNA13-201ENST00000516672 BCORL1Q5H9F3 1711 aa7.3□□□□□ -1.24
SCARNA13-201ENST00000516672 ZRANB1Q9UGI0 708 aa7.29□□□□□ -1.24
SCARNA13-201ENST00000516672 ZCCHC6Q5VYS8 1495 aaKnown RBP7.29□□□□□ -1.24
SCARNA13-201ENST00000516672 SHROOM2Q13796 1616 aa7.28□□□□□ -1.24
SCARNA13-201ENST00000516672 SENP3Q9H4L4 574 aaPredicted RBP7.27□□□□□ -1.25
SCARNA13-201ENST00000516672 MROH2BQ7Z745 1585 aa7.26□□□□□ -1.25
SCARNA13-201ENST00000516672 CAPN15O75808 1086 aa7.25□□□□□ -1.25
SCARNA13-201ENST00000516672 MAP3K4Q9Y6R4 1608 aa7.23□□□□□ -1.25
SCARNA13-201ENST00000516672 TOM1O60784 492 aa7.23□□□□□ -1.25
SCARNA13-201ENST00000516672 ARID4BQ4LE39 1312 aaPredicted RBP7.23□□□□□ -1.25
SCARNA13-201ENST00000516672 ZNF335Q9H4Z2 1342 aaPredicted RBP7.23□□□□□ -1.25
SCARNA13-201ENST00000516672 PRG4Q92954 1404 aaPredicted RBP7.22□□□□□ -1.25
SCARNA13-201ENST00000516672 GRIN2BQ13224 1484 aa7.22□□□□□ -1.25
SCARNA13-201ENST00000516672 PREX1Q8TCU6 1659 aa7.22□□□□□ -1.25
SCARNA13-201ENST00000516672 PLB1Q6P1J6 1458 aa7.21□□□□□ -1.26
SCARNA13-201ENST00000516672 RAD54L2Q9Y4B4 1467 aa7.21□□□□□ -1.26
SCARNA13-201ENST00000516672 FOXD1Q16676 465 aa7.2□□□□□ -1.26
SCARNA13-201ENST00000516672 TRIM52Q96A61 297 aa7.2□□□□□ -1.26
SCARNA13-201ENST00000516672 KIAA0586Q9BVV6 1533 aa7.2□□□□□ -1.26
SCARNA13-201ENST00000516672 ABCC8Q09428 1581 aa7.2□□□□□ -1.26
SCARNA13-201ENST00000516672 ASXL2Q76L83 1435 aa7.19□□□□□ -1.26
SCARNA13-201ENST00000516672 POLA1P09884 1462 aaPredicted RBP7.19□□□□□ -1.26
SCARNA13-201ENST00000516672 C1QTNF8P60827 252 aa7.19□□□□□ -1.26
SCARNA13-201ENST00000516672 DNMBPQ6XZF7 1577 aa7.19□□□□□ -1.26
SCARNA13-201ENST00000516672 WDR97A6NE52 1622 aa7.17□□□□□ -1.26
SCARNA13-201ENST00000516672 LRP5O75197 1615 aa7.16□□□□□ -1.26
SCARNA13-201ENST00000516672 NUP160Q12769 1436 aa7.16□□□□□ -1.26
SCARNA13-201ENST00000516672 EPRSP07814 1512 aaKnown RBP7.13□□□□□ -1.27
SCARNA13-201ENST00000516672 GRIN2AQ12879 1464 aa7.13□□□□□ -1.27
SCARNA13-201ENST00000516672 SOGA1O94964 1423 aa7.13□□□□□ -1.27
SCARNA13-201ENST00000516672 UHRF1BP1Q6BDS2 1440 aa7.12□□□□□ -1.27
SCARNA13-201ENST00000516672 KIAA0556O60303 1618 aa7.12□□□□□ -1.27
SCARNA13-201ENST00000516672 PRDM2Q13029 1718 aa7.11□□□□□ -1.27
SCARNA13-201ENST00000516672 PRELPP51888 382 aa7.11□□□□□ -1.27
SCARNA13-201ENST00000516672 CEP350Q5VT06 3117 aa7.11□□□□□ -1.27
SCARNA13-201ENST00000516672 RAPGEF6Q8TEU7 1601 aa7.1□□□□□ -1.27
SCARNA13-201ENST00000516672 PBRM1Q86U86 1689 aa7.09□□□□□ -1.27
SCARNA13-201ENST00000516672 ALKQ9UM73 1620 aa7.09□□□□□ -1.27
SCARNA13-201ENST00000516672 JPH4Q96JJ6 628 aa7.09□□□□□ -1.27
SCARNA13-201ENST00000516672 NCOA1Q15788 1441 aa7.08□□□□□ -1.28
SCARNA13-201ENST00000516672 TTC37Q6PGP7 1564 aa7.08□□□□□ -1.28
SCARNA13-201ENST00000516672 ZNF784Q8NCA9 323 aaPredicted RBP7.07□□□□□ -1.28
SCARNA13-201ENST00000516672 PTPRKQ15262 1439 aa7.06□□□□□ -1.28
SCARNA13-201ENST00000516672 ABCC2Q92887 1545 aa7.06□□□□□ -1.28
SCARNA13-201ENST00000516672 CEBPAP49715 358 aaPredicted RBP7.05□□□□□ -1.28
SCARNA13-201ENST00000516672 LRRC7Q96NW7 1537 aa7.05□□□□□ -1.28
SCARNA13-201ENST00000516672 PPP6R1Q9UPN7 881 aa7.04□□□□□ -1.28
SCARNA13-201ENST00000516672 CUX1P39880 1505 aa7.04□□□□□ -1.28
SCARNA13-201ENST00000516672 CUL7Q14999 1698 aa7.03□□□□□ -1.28
SCARNA13-201ENST00000516672 MAGI3Q5TCQ9 1506 aa7.03□□□□□ -1.28
SCARNA13-201ENST00000516672 FER1L4A9Z1Z3 1794 aa7.03□□□□□ -1.28
SCARNA13-201ENST00000516672 ARAP3Q8WWN8 1544 aa7.02□□□□□ -1.29
SCARNA13-201ENST00000516672 RXRBP28702 533 aa7.01□□□□□ -1.29
SCARNA13-201ENST00000516672 POGZQ7Z3K3 1410 aa7.01□□□□□ -1.29
SCARNA13-201ENST00000516672 NCKAP5LQ9HCH0 1330 aa7.01□□□□□ -1.29
SCARNA13-201ENST00000516672 CDK12Q9NYV4 1490 aaPredicted RBP7□□□□□ -1.29
SCARNA13-201ENST00000516672 MLECQ14165 292 aa7□□□□□ -1.29
SCARNA13-201ENST00000516672 CD109Q6YHK3 1445 aa7□□□□□ -1.29
SCARNA13-201ENST00000516672 NUTM2BA6NNL0 878 aaPredicted RBP6.98□□□□□ -1.29
SCARNA13-201ENST00000516672 NUTM2EB1AL46 878 aaPredicted RBP6.98□□□□□ -1.29
SCARNA13-201ENST00000516672 RAPGEF3O95398 923 aa6.98□□□□□ -1.29
SCARNA13-201ENST00000516672 NUTM2DQ5VT03 806 aaPredicted RBP6.98□□□□□ -1.29
SCARNA13-201ENST00000516672 ZNF772Q68DY9 489 aaPredicted RBP6.98□□□□□ -1.29
SCARNA13-201ENST00000516672 NUTM2AQ8IVF1 878 aaPredicted RBP6.98□□□□□ -1.29
SCARNA13-201ENST00000516672 NHSL1Q5SYE7 1610 aa6.98□□□□□ -1.29
SCARNA13-201ENST00000516672 CPS1P31327 1500 aa6.97□□□□□ -1.29
SCARNA13-201ENST00000516672 COL13A1Q5TAT6 717 aaPredicted RBP6.97□□□□□ -1.29
SCARNA13-201ENST00000516672 CAMSAP1Q5T5Y3 1602 aa6.97□□□□□ -1.29
SCARNA13-201ENST00000516672 TNS4Q8IZW8 715 aa6.96□□□□□ -1.3
SCARNA13-201ENST00000516672 FANCAO15360 1455 aa6.96□□□□□ -1.3
SCARNA13-201ENST00000516672 TTBK1Q5TCY1 1321 aaPredicted RBP6.96□□□□□ -1.3
SCARNA13-201ENST00000516672 FGD5Q6ZNL6 1462 aa6.95□□□□□ -1.3
SCARNA13-201ENST00000516672 ADAMTS12P58397 1594 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms