RNA–Protein interactions for RNA: ENST00000516438.2

RNU6-70P-201, Transcript of RNA, U6 small nuclear 70, pseudogene, humanhuman

BASIC

Gene RNU6-70P, Length 60 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-70P-201ENST00000516438 PAK3O75914 559 aaPredicted RBP4.74□□□□□ -1.65
RNU6-70P-201ENST00000516438 ATN1P54259 1190 aaPredicted RBP4.73□□□□□ -1.65
RNU6-70P-201ENST00000516438 PABPN1Q86U42 306 aaKnown RBP eCLIP4.73□□□□□ -1.65
RNU6-70P-201ENST00000516438 KRTAP3-3Q9BYR6 98 aa4.73□□□□□ -1.65
RNU6-70P-201ENST00000516438 KRTAP3-2Q9BYR7 98 aa4.73□□□□□ -1.65
RNU6-70P-201ENST00000516438 MS4A3Q96HJ5 214 aa4.71□□□□□ -1.66
RNU6-70P-201ENST00000516438 SLAIN1Q8ND83 568 aa4.7□□□□□ -1.66
RNU6-70P-201ENST00000516438 MARVELD3Q96A59 401 aa4.67□□□□□ -1.66
RNU6-70P-201ENST00000516438 CREBZFQ9NS37 354 aa4.66□□□□□ -1.66
RNU6-70P-201ENST00000516438 MKRN4PQ13434 485 aaPredicted RBP4.65□□□□□ -1.67
RNU6-70P-201ENST00000516438 COLQQ9Y215 455 aaPredicted RBP4.65□□□□□ -1.67
RNU6-70P-201ENST00000516438 SNPHO15079 494 aa4.64□□□□□ -1.67
RNU6-70P-201ENST00000516438 RNF166Q96A37 237 aaPredicted RBP4.63□□□□□ -1.67
RNU6-70P-201ENST00000516438 SEC24BO95487 1268 aa4.62□□□□□ -1.67
RNU6-70P-201ENST00000516438 POTEB3A0JP26 581 aa4.61□□□□□ -1.67
RNU6-70P-201ENST00000516438 POTEBQ6S5H4 581 aa4.61□□□□□ -1.67
RNU6-70P-201ENST00000516438 BMP2KQ9NSY1 1161 aaPredicted RBP4.6□□□□□ -1.67
RNU6-70P-201ENST00000516438 HS3ST6Q96QI5 342 aa4.59□□□□□ -1.67
RNU6-70P-201ENST00000516438 EMP3P54852 163 aa4.58□□□□□ -1.68
RNU6-70P-201ENST00000516438 TIE1P35590 1138 aa4.56□□□□□ -1.68
RNU6-70P-201ENST00000516438 IER5LQ5T953 404 aa4.56□□□□□ -1.68
RNU6-70P-201ENST00000516438 NPM1P06748 294 aaKnown RBP eCLIP4.55□□□□□ -1.68
RNU6-70P-201ENST00000516438 FAM205CA6NFA0 338 aa4.54□□□□□ -1.68
RNU6-70P-201ENST00000516438 KCNA4P22459 653 aa4.54□□□□□ -1.68
RNU6-70P-201ENST00000516438 MYT1LQ9UL68 1186 aa4.54□□□□□ -1.68
RNU6-70P-201ENST00000516438 TRPC6Q9Y210 931 aa4.51□□□□□ -1.69
RNU6-70P-201ENST00000516438 MNX1P50219 401 aaPredicted RBP4.5□□□□□ -1.69
RNU6-70P-201ENST00000516438 FOXD4L1Q9NU39 408 aa4.5□□□□□ -1.69
RNU6-70P-201ENST00000516438 TTLL13PA6NNM8 815 aa4.49□□□□□ -1.69
RNU6-70P-201ENST00000516438 KIF12Q96FN5 646 aa4.49□□□□□ -1.69
RNU6-70P-201ENST00000516438 ATXN8OSP0DMR3 200 aa4.48□□□□□ -1.69
RNU6-70P-201ENST00000516438 STAG3Q9UJ98 1225 aa4.47□□□□□ -1.69
RNU6-70P-201ENST00000516438 CCDC61Q9Y6R9 512 aa4.47□□□□□ -1.69
RNU6-70P-201ENST00000516438 PTGER2P43116 358 aa4.45□□□□□ -1.7
RNU6-70P-201ENST00000516438 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.45□□□□□ -1.7
RNU6-70P-201ENST00000516438 PLA2G2EQ9NZK7 142 aa4.45□□□□□ -1.7
RNU6-70P-201ENST00000516438 TRIM35Q9UPQ4 493 aa4.45□□□□□ -1.7
RNU6-70P-201ENST00000516438 PLCG2P16885 1265 aa4.42□□□□□ -1.7
RNU6-70P-201ENST00000516438 MAP3K13O43283 966 aa4.4□□□□□ -1.71
RNU6-70P-201ENST00000516438 IRX5P78411 483 aaPredicted RBP4.4□□□□□ -1.71
RNU6-70P-201ENST00000516438 TSPYL2Q9H2G4 693 aaPredicted RBP4.4□□□□□ -1.71
RNU6-70P-201ENST00000516438 IRX2Q9BZI1 471 aaPredicted RBP4.38□□□□□ -1.71
RNU6-70P-201ENST00000516438 RGS20O76081 388 aa4.36□□□□□ -1.71
RNU6-70P-201ENST00000516438 OCEL1Q9H607 264 aa4.36□□□□□ -1.71
RNU6-70P-201ENST00000516438 ERBB3P21860 1342 aa4.33□□□□□ -1.72
RNU6-70P-201ENST00000516438 SGIP1Q9BQI5 828 aa4.33□□□□□ -1.72
RNU6-70P-201ENST00000516438 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
RNU6-70P-201ENST00000516438 HOXB1P14653 301 aaPredicted RBP4.32□□□□□ -1.72
RNU6-70P-201ENST00000516438 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
RNU6-70P-201ENST00000516438 ZNF687Q8N1G0 1237 aa4.3□□□□□ -1.72
RNU6-70P-201ENST00000516438 HCSTQ9UBK5 93 aa4.3□□□□□ -1.72
RNU6-70P-201ENST00000516438 C3orf67Q6ZVT6 689 aa4.28□□□□□ -1.72
RNU6-70P-201ENST00000516438 HOXB3P14651 431 aaPredicted RBP4.27□□□□□ -1.73
RNU6-70P-201ENST00000516438 VARS2Q5ST30 1063 aaKnown RBP4.27□□□□□ -1.73
RNU6-70P-201ENST00000516438 TMEM106CQ9BVX2 250 aa4.27□□□□□ -1.73
RNU6-70P-201ENST00000516438 PCDHB13Q9Y5F0 798 aa4.24□□□□□ -1.73
RNU6-70P-201ENST00000516438 Q6ZNB5 142 aa4.23□□□□□ -1.73
RNU6-70P-201ENST00000516438 ANKRD13DQ6ZTN6 518 aa4.23□□□□□ -1.73
RNU6-70P-201ENST00000516438 ZNF710Q8N1W2 664 aa4.23□□□□□ -1.73
RNU6-70P-201ENST00000516438 L3MBTL3Q96JM7 780 aaPredicted RBP4.23□□□□□ -1.73
RNU6-70P-201ENST00000516438 IFNL1Q8IU54 200 aa4.2□□□□□ -1.74
RNU6-70P-201ENST00000516438 DOK7Q18PE1 504 aa4.19□□□□□ -1.74
RNU6-70P-201ENST00000516438 IFFO2Q5TF58 517 aa4.19□□□□□ -1.74
RNU6-70P-201ENST00000516438 PDCD7Q8N8D1 485 aaKnown RBP4.19□□□□□ -1.74
RNU6-70P-201ENST00000516438 LSM11P83369 360 aaKnown RBP eCLIP4.18□□□□□ -1.74
RNU6-70P-201ENST00000516438 ZBTB22O15209 634 aa4.16□□□□□ -1.74
RNU6-70P-201ENST00000516438 RASEFQ8IZ41 740 aa4.16□□□□□ -1.74
RNU6-70P-201ENST00000516438 RIMBP2O15034 1052 aa4.15□□□□□ -1.75
RNU6-70P-201ENST00000516438 ZSWIM6Q9HCJ5 1215 aa4.14□□□□□ -1.75
RNU6-70P-201ENST00000516438 LCE2BO14633 110 aa4.13□□□□□ -1.75
RNU6-70P-201ENST00000516438 SLC4A1APQ9BWU0 796 aaKnown RBP4.13□□□□□ -1.75
RNU6-70P-201ENST00000516438 A0A0G2JS52 829 aa4.12□□□□□ -1.75
RNU6-70P-201ENST00000516438 TRAF7Q6Q0C0 670 aa4.11□□□□□ -1.75
RNU6-70P-201ENST00000516438 ZNF775Q96BV0 537 aaPredicted RBP4.1□□□□□ -1.75
RNU6-70P-201ENST00000516438 LAPTM4AQ15012 233 aa4.09□□□□□ -1.75
RNU6-70P-201ENST00000516438 GPR153Q6NV75 609 aa4.09□□□□□ -1.75
RNU6-70P-201ENST00000516438 PBX2P40425 430 aa4.06□□□□□ -1.76
RNU6-70P-201ENST00000516438 ILDR1Q86SU0 546 aaPredicted RBP4.06□□□□□ -1.76
RNU6-70P-201ENST00000516438 ZNF787Q6DD87 383 aa4.04□□□□□ -1.76
RNU6-70P-201ENST00000516438 ZNF316A6NFI3 1004 aaPredicted RBP4.03□□□□□ -1.76
RNU6-70P-201ENST00000516438 SPDYE4A6NLX3 237 aa4.03□□□□□ -1.76
RNU6-70P-201ENST00000516438 MKRN3Q13064 507 aaKnown RBP4.03□□□□□ -1.76
RNU6-70P-201ENST00000516438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNU6-70P-201ENST00000516438 POTEEQ6S8J3 1075 aa4.02□□□□□ -1.77
RNU6-70P-201ENST00000516438 ADGRD1Q6QNK2 874 aa4.01□□□□□ -1.77
RNU6-70P-201ENST00000516438 BOLA1Q9Y3E2 137 aa4.01□□□□□ -1.77
RNU6-70P-201ENST00000516438 PLEKHG5O94827 1062 aa4□□□□□ -1.77
RNU6-70P-201ENST00000516438 G3V3G9 751 aa3.99□□□□□ -1.77
RNU6-70P-201ENST00000516438 GOLGA2Q08379 1002 aa3.99□□□□□ -1.77
RNU6-70P-201ENST00000516438 DCAF8Q5TAQ9 597 aa3.99□□□□□ -1.77
RNU6-70P-201ENST00000516438 DPY19L2Q6NUT2 758 aa3.99□□□□□ -1.77
RNU6-70P-201ENST00000516438 HRO43593 1189 aa3.98□□□□□ -1.77
RNU6-70P-201ENST00000516438 KCTD12Q96CX2 325 aaKnown RBP3.98□□□□□ -1.77
RNU6-70P-201ENST00000516438 NUBP1P53384 320 aa3.97□□□□□ -1.77
RNU6-70P-201ENST00000516438 ARSIQ5FYB1 569 aa3.97□□□□□ -1.77
RNU6-70P-201ENST00000516438 AXIN2Q9Y2T1 843 aa3.97□□□□□ -1.77
RNU6-70P-201ENST00000516438 TK2O00142 265 aa3.96□□□□□ -1.78
RNU6-70P-201ENST00000516438 GFRA3O60609 400 aa3.96□□□□□ -1.78
RNU6-70P-201ENST00000516438 SUZ12Q15022 739 aaKnown RBP3.95□□□□□ -1.78
RNU6-70P-201ENST00000516438 STK17AQ9UEE5 414 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms