RNA–Protein interactions for RNA: ENST00000516348.1

RNU6-479P-201, Transcript of RNA, U6 small nuclear 479, pseudogene, humanhuman

BASIC

Gene RNU6-479P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-479P-201ENST00000516348 CDAN1Q8IWY9 1227 aa9□□□□□ -0.97
RNU6-479P-201ENST00000516348 SLC39A7Q92504 469 aa9□□□□□ -0.97
RNU6-479P-201ENST00000516348 MS4A3Q96HJ5 214 aa8.97□□□□□ -0.97
RNU6-479P-201ENST00000516348 PAK3O75914 559 aaPredicted RBP8.96□□□□□ -0.98
RNU6-479P-201ENST00000516348 SCUBE2Q9NQ36 999 aa8.96□□□□□ -0.98
RNU6-479P-201ENST00000516348 POTEFA5A3E0 1075 aa8.91□□□□□ -0.98
RNU6-479P-201ENST00000516348 ATN1P54259 1190 aaPredicted RBP8.88□□□□□ -0.99
RNU6-479P-201ENST00000516348 MMRN1Q13201 1228 aa8.86□□□□□ -0.99
RNU6-479P-201ENST00000516348 MNX1P50219 401 aaPredicted RBP8.84□□□□□ -0.99
RNU6-479P-201ENST00000516348 SPNS2Q8IVW8 549 aa8.8□□□□□ -1
RNU6-479P-201ENST00000516348 STAG3Q9UJ98 1225 aa8.8□□□□□ -1
RNU6-479P-201ENST00000516348 NPM1P06748 294 aaKnown RBP eCLIP8.79□□□□□ -1
RNU6-479P-201ENST00000516348 ST18O60284 1047 aa8.78□□□□□ -1
RNU6-479P-201ENST00000516348 TRPC6Q9Y210 931 aa8.78□□□□□ -1
RNU6-479P-201ENST00000516348 BMP2KQ9NSY1 1161 aaPredicted RBP8.77□□□□□ -1.01
RNU6-479P-201ENST00000516348 COLQQ9Y215 455 aaPredicted RBP8.76□□□□□ -1.01
RNU6-479P-201ENST00000516348 TSPYL2Q9H2G4 693 aaPredicted RBP8.71□□□□□ -1.02
RNU6-479P-201ENST00000516348 CCDC61Q9Y6R9 512 aa8.69□□□□□ -1.02
RNU6-479P-201ENST00000516348 KIF12Q96FN5 646 aa8.68□□□□□ -1.02
RNU6-479P-201ENST00000516348 SLAIN1Q8ND83 568 aa8.67□□□□□ -1.02
RNU6-479P-201ENST00000516348 SEC24BO95487 1268 aa8.66□□□□□ -1.02
RNU6-479P-201ENST00000516348 TIE1P35590 1138 aa8.63□□□□□ -1.03
RNU6-479P-201ENST00000516348 TTLL13PA6NNM8 815 aa8.62□□□□□ -1.03
RNU6-479P-201ENST00000516348 MAP3K13O43283 966 aa8.61□□□□□ -1.03
RNU6-479P-201ENST00000516348 MARVELD3Q96A59 401 aa8.59□□□□□ -1.03
RNU6-479P-201ENST00000516348 TRIM35Q9UPQ4 493 aa8.57□□□□□ -1.04
RNU6-479P-201ENST00000516348 SPDYE4A6NLX3 237 aa8.55□□□□□ -1.04
RNU6-479P-201ENST00000516348 TMEM121BQ9BXQ6 578 aaPredicted RBP8.55□□□□□ -1.04
RNU6-479P-201ENST00000516348 IER5LQ5T953 404 aa8.53□□□□□ -1.04
RNU6-479P-201ENST00000516348 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
RNU6-479P-201ENST00000516348 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
RNU6-479P-201ENST00000516348 POTEB3A0JP26 581 aa8.46□□□□□ -1.06
RNU6-479P-201ENST00000516348 POTEBQ6S5H4 581 aa8.46□□□□□ -1.06
RNU6-479P-201ENST00000516348 RASEFQ8IZ41 740 aa8.45□□□□□ -1.06
RNU6-479P-201ENST00000516348 PLCG2P16885 1265 aa8.44□□□□□ -1.06
RNU6-479P-201ENST00000516348 SNPHO15079 494 aa8.41□□□□□ -1.06
RNU6-479P-201ENST00000516348 EMP3P54852 163 aa8.41□□□□□ -1.06
RNU6-479P-201ENST00000516348 IRX5P78411 483 aaPredicted RBP8.41□□□□□ -1.06
RNU6-479P-201ENST00000516348 HS3ST6Q96QI5 342 aa8.4□□□□□ -1.06
RNU6-479P-201ENST00000516348 PCDHB13Q9Y5F0 798 aa8.4□□□□□ -1.06
RNU6-479P-201ENST00000516348 FAM205CA6NFA0 338 aa8.37□□□□□ -1.07
RNU6-479P-201ENST00000516348 TMEM106CQ9BVX2 250 aa8.37□□□□□ -1.07
RNU6-479P-201ENST00000516348 IFNL1Q8IU54 200 aa8.36□□□□□ -1.07
RNU6-479P-201ENST00000516348 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.35□□□□□ -1.07
RNU6-479P-201ENST00000516348 SGIP1Q9BQI5 828 aa8.34□□□□□ -1.07
RNU6-479P-201ENST00000516348 OCEL1Q9H607 264 aa8.31□□□□□ -1.08
RNU6-479P-201ENST00000516348 RNF166Q96A37 237 aaPredicted RBP8.27□□□□□ -1.09
RNU6-479P-201ENST00000516348 MIER1Q8N108 512 aa8.23□□□□□ -1.09
RNU6-479P-201ENST00000516348 PROM2Q8N271 834 aa8.23□□□□□ -1.09
RNU6-479P-201ENST00000516348 C3orf67Q6ZVT6 689 aa8.2□□□□□ -1.1
RNU6-479P-201ENST00000516348 PLEKHG5O94827 1062 aa8.19□□□□□ -1.1
RNU6-479P-201ENST00000516348 NUBP1P53384 320 aa8.18□□□□□ -1.1
RNU6-479P-201ENST00000516348 PDCD7Q8N8D1 485 aaKnown RBP8.18□□□□□ -1.1
RNU6-479P-201ENST00000516348 CSRNP3Q8WYN3 585 aa8.16□□□□□ -1.1
RNU6-479P-201ENST00000516348 MYT1LQ9UL68 1186 aa8.16□□□□□ -1.1
RNU6-479P-201ENST00000516348 HOXB3P14651 431 aaPredicted RBP8.11□□□□□ -1.11
RNU6-479P-201ENST00000516348 PCDHB8Q9UN66 801 aa8.1□□□□□ -1.11
RNU6-479P-201ENST00000516348 ERBB3P21860 1342 aa8.09□□□□□ -1.11
RNU6-479P-201ENST00000516348 HOXB1P14653 301 aaPredicted RBP8.08□□□□□ -1.12
RNU6-479P-201ENST00000516348 FAM212AQ96EL1 285 aa8.08□□□□□ -1.12
RNU6-479P-201ENST00000516348 L3MBTL3Q96JM7 780 aaPredicted RBP8.08□□□□□ -1.12
RNU6-479P-201ENST00000516348 PYGBP11216 843 aa8.07□□□□□ -1.12
RNU6-479P-201ENST00000516348 PLCD3Q8N3E9 789 aa8.07□□□□□ -1.12
RNU6-479P-201ENST00000516348 VARS2Q5ST30 1063 aaKnown RBP8.05□□□□□ -1.12
RNU6-479P-201ENST00000516348 ZNF710Q8N1W2 664 aa8.02□□□□□ -1.13
RNU6-479P-201ENST00000516348 MKRN3Q13064 507 aaKnown RBP8.01□□□□□ -1.13
RNU6-479P-201ENST00000516348 DPY19L2Q6NUT2 758 aa8.01□□□□□ -1.13
RNU6-479P-201ENST00000516348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.01□□□□□ -1.13
RNU6-479P-201ENST00000516348 ZBTB47Q9UFB7 747 aaPredicted RBP7.98□□□□□ -1.13
RNU6-479P-201ENST00000516348 ZNF687Q8N1G0 1237 aa7.97□□□□□ -1.13
RNU6-479P-201ENST00000516348 GOLGA2Q08379 1002 aa7.96□□□□□ -1.14
RNU6-479P-201ENST00000516348 DCAF8Q5TAQ9 597 aa7.95□□□□□ -1.14
RNU6-479P-201ENST00000516348 PLA2G2EQ9NZK7 142 aa7.95□□□□□ -1.14
RNU6-479P-201ENST00000516348 PTGER2P43116 358 aa7.94□□□□□ -1.14
RNU6-479P-201ENST00000516348 DOK7Q18PE1 504 aa7.94□□□□□ -1.14
RNU6-479P-201ENST00000516348 ILDR1Q86SU0 546 aaPredicted RBP7.93□□□□□ -1.14
RNU6-479P-201ENST00000516348 ANKRD13DQ6ZTN6 518 aa7.92□□□□□ -1.14
RNU6-479P-201ENST00000516348 BOLA1Q9Y3E2 137 aa7.91□□□□□ -1.14
RNU6-479P-201ENST00000516348 RIMBP2O15034 1052 aa7.86□□□□□ -1.15
RNU6-479P-201ENST00000516348 G3V3G9 751 aa7.85□□□□□ -1.15
RNU6-479P-201ENST00000516348 PSEN1P49768 467 aa7.85□□□□□ -1.15
RNU6-479P-201ENST00000516348 GPR153Q6NV75 609 aa7.85□□□□□ -1.15
RNU6-479P-201ENST00000516348 ZNF467Q7Z7K2 595 aaPredicted RBP7.84□□□□□ -1.15
RNU6-479P-201ENST00000516348 LSM11P83369 360 aaKnown RBP eCLIP7.83□□□□□ -1.16
RNU6-479P-201ENST00000516348 TMEM92Q6UXU6 159 aa7.8□□□□□ -1.16
RNU6-479P-201ENST00000516348 ZSWIM6Q9HCJ5 1215 aa7.79□□□□□ -1.16
RNU6-479P-201ENST00000516348 CABP2Q9NPB3 220 aa7.78□□□□□ -1.16
RNU6-479P-201ENST00000516348 HCSTQ9UBK5 93 aa7.78□□□□□ -1.16
RNU6-479P-201ENST00000516348 ARSIQ5FYB1 569 aa7.76□□□□□ -1.17
RNU6-479P-201ENST00000516348 KHSRPQ92945 711 aaKnown RBP eCLIP7.76□□□□□ -1.17
RNU6-479P-201ENST00000516348 ZNF316A6NFI3 1004 aaPredicted RBP7.74□□□□□ -1.17
RNU6-479P-201ENST00000516348 POTEEQ6S8J3 1075 aa7.74□□□□□ -1.17
RNU6-479P-201ENST00000516348 PDAP1Q13442 181 aaKnown RBP7.72□□□□□ -1.17
RNU6-479P-201ENST00000516348 AXIN2Q9Y2T1 843 aa7.72□□□□□ -1.17
RNU6-479P-201ENST00000516348 IRX2Q9BZI1 471 aaPredicted RBP7.7□□□□□ -1.18
RNU6-479P-201ENST00000516348 CHRM1P11229 460 aaPredicted RBP7.69□□□□□ -1.18
RNU6-479P-201ENST00000516348 EHMT2Q96KQ7 1210 aa7.69□□□□□ -1.18
RNU6-479P-201ENST00000516348 MICALL2Q8IY33 904 aa7.68□□□□□ -1.18
RNU6-479P-201ENST00000516348 GSE1Q14687 1217 aa7.67□□□□□ -1.18
RNU6-479P-201ENST00000516348 PBX2P40425 430 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms