RNA–Protein interactions for RNA: ENST00000516348.1

RNU6-479P-201, Transcript of RNA, U6 small nuclear 479, pseudogene, humanhuman

BASIC

Gene RNU6-479P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-479P-201ENST00000516348 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
RNU6-479P-201ENST00000516348 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
RNU6-479P-201ENST00000516348 SENP3Q9H4L4 574 aaPredicted RBP16.08■□□□□ 0.16
RNU6-479P-201ENST00000516348 PHF23Q9BUL5 403 aaPredicted RBP15.83■□□□□ 0.12
RNU6-479P-201ENST00000516348 POTEDQ86YR6 584 aa15.3■□□□□ 0.04
RNU6-479P-201ENST00000516348 FOXD1Q16676 465 aa15.16■□□□□ 0.02
RNU6-479P-201ENST00000516348 MSH5O43196 834 aa14.35□□□□□ -0.11
RNU6-479P-201ENST00000516348 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
RNU6-479P-201ENST00000516348 PPP6R1Q9UPN7 881 aa13.68□□□□□ -0.22
RNU6-479P-201ENST00000516348 ADRA2BP18089 450 aa13.58□□□□□ -0.24
RNU6-479P-201ENST00000516348 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
RNU6-479P-201ENST00000516348 CACNB1Q02641 598 aaPredicted RBP12.8□□□□□ -0.36
RNU6-479P-201ENST00000516348 MAPK8IP2Q13387 824 aaPredicted RBP12.71□□□□□ -0.37
RNU6-479P-201ENST00000516348 DMRT2Q9Y5R5 561 aa12.67□□□□□ -0.38
RNU6-479P-201ENST00000516348 SCAF1Q9H7N4 1312 aaKnown RBP12.26□□□□□ -0.45
RNU6-479P-201ENST00000516348 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
RNU6-479P-201ENST00000516348 DCAF8L1A6NGE4 600 aa12.22□□□□□ -0.45
RNU6-479P-201ENST00000516348 C1QBPQ07021 282 aaKnown RBP11.96□□□□□ -0.49
RNU6-479P-201ENST00000516348 HOXD11P31277 338 aaPredicted RBP11.92□□□□□ -0.5
RNU6-479P-201ENST00000516348 POTEHQ6S545 545 aa11.84□□□□□ -0.51
RNU6-479P-201ENST00000516348 PPP4R3CPQ6ZMV5 832 aa11.65□□□□□ -0.54
RNU6-479P-201ENST00000516348 RNF216Q9NWF9 866 aaPredicted RBP11.62□□□□□ -0.55
RNU6-479P-201ENST00000516348 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
RNU6-479P-201ENST00000516348 DNAJC5BQ9UF47 199 aa11.55□□□□□ -0.56
RNU6-479P-201ENST00000516348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.59
RNU6-479P-201ENST00000516348 DSG3P32926 999 aa11.24□□□□□ -0.61
RNU6-479P-201ENST00000516348 SPINK5Q9NQ38 1064 aaPredicted RBP11.18□□□□□ -0.62
RNU6-479P-201ENST00000516348 CAPN15O75808 1086 aa11.13□□□□□ -0.63
RNU6-479P-201ENST00000516348 U3KPZ7 1027 aaPredicted RBP11.09□□□□□ -0.63
RNU6-479P-201ENST00000516348 NCBP3Q53F19 620 aaKnown RBP10.9□□□□□ -0.66
RNU6-479P-201ENST00000516348 ABCB7O75027 752 aa10.86□□□□□ -0.67
RNU6-479P-201ENST00000516348 NPM3O75607 178 aaKnown RBP10.86□□□□□ -0.67
RNU6-479P-201ENST00000516348 TRHP20396 242 aaPredicted RBP10.8□□□□□ -0.68
RNU6-479P-201ENST00000516348 CHRDL2Q6WN34 429 aa10.77□□□□□ -0.69
RNU6-479P-201ENST00000516348 SP7Q8TDD2 431 aaPredicted RBP10.75□□□□□ -0.69
RNU6-479P-201ENST00000516348 ZNF219Q9P2Y4 722 aaPredicted RBP10.67□□□□□ -0.7
RNU6-479P-201ENST00000516348 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.7
RNU6-479P-201ENST00000516348 SLC4A2P04920 1241 aa10.57□□□□□ -0.72
RNU6-479P-201ENST00000516348 APLP2Q06481 763 aa10.53□□□□□ -0.72
RNU6-479P-201ENST00000516348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.39□□□□□ -0.75
RNU6-479P-201ENST00000516348 HNRNPUL2Q1KMD3 747 aaKnown RBP10.39□□□□□ -0.75
RNU6-479P-201ENST00000516348 PIP4P2Q8N4L2 257 aa10.39□□□□□ -0.75
RNU6-479P-201ENST00000516348 HAX1O00165 279 aa10.37□□□□□ -0.75
RNU6-479P-201ENST00000516348 POLA2Q14181 598 aa10.33□□□□□ -0.76
RNU6-479P-201ENST00000516348 SAMD1Q6SPF0 538 aaPredicted RBP10.33□□□□□ -0.76
RNU6-479P-201ENST00000516348 AKT1S1Q96B36 256 aa10.29□□□□□ -0.76
RNU6-479P-201ENST00000516348 EVX2Q03828 476 aa10.28□□□□□ -0.76
RNU6-479P-201ENST00000516348 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
RNU6-479P-201ENST00000516348 FXR2P51116 673 aaKnown RBP eCLIP10.18□□□□□ -0.78
RNU6-479P-201ENST00000516348 PITPNM1O00562 1244 aa10.17□□□□□ -0.78
RNU6-479P-201ENST00000516348 LHX8Q68G74 356 aa10.07□□□□□ -0.8
RNU6-479P-201ENST00000516348 OSCARQ8IYS5 282 aa10.07□□□□□ -0.8
RNU6-479P-201ENST00000516348 PLSCR2Q9NRY7 297 aa10.06□□□□□ -0.8
RNU6-479P-201ENST00000516348 KCNA4P22459 653 aa10.05□□□□□ -0.8
RNU6-479P-201ENST00000516348 MYCNP04198 464 aaPredicted RBP9.99□□□□□ -0.81
RNU6-479P-201ENST00000516348 ZBTB12Q9Y330 459 aaPredicted RBP9.96□□□□□ -0.82
RNU6-479P-201ENST00000516348 ATF5Q9Y2D1 282 aaPredicted RBP9.94□□□□□ -0.82
RNU6-479P-201ENST00000516348 GABBR2O75899 941 aa9.93□□□□□ -0.82
RNU6-479P-201ENST00000516348 C19orf67A6NJJ6 358 aa9.89□□□□□ -0.83
RNU6-479P-201ENST00000516348 PRKAR2AP13861 404 aaKnown RBP9.88□□□□□ -0.83
RNU6-479P-201ENST00000516348 POTEIP0CG38 1075 aa9.77□□□□□ -0.85
RNU6-479P-201ENST00000516348 CLEC11AQ9Y240 323 aa9.73□□□□□ -0.85
RNU6-479P-201ENST00000516348 CHADLQ6NUI6 762 aa9.68□□□□□ -0.86
RNU6-479P-201ENST00000516348 SPDYE2BA6NHP3 402 aa9.65□□□□□ -0.86
RNU6-479P-201ENST00000516348 SPDYE6P0CI01 402 aa9.65□□□□□ -0.86
RNU6-479P-201ENST00000516348 SPDYE2Q495Y8 402 aa9.65□□□□□ -0.86
RNU6-479P-201ENST00000516348 SPDYE1Q8NFV5 336 aaPredicted RBP9.64□□□□□ -0.87
RNU6-479P-201ENST00000516348 POTEMA6NI47 508 aa9.54□□□□□ -0.88
RNU6-479P-201ENST00000516348 FOXD4L1Q9NU39 408 aa9.53□□□□□ -0.88
RNU6-479P-201ENST00000516348 CD44P16070 742 aaKnown RBP9.52□□□□□ -0.89
RNU6-479P-201ENST00000516348 OTUD5Q96G74 571 aa9.51□□□□□ -0.89
RNU6-479P-201ENST00000516348 POTEGQ6S5H5 508 aa9.5□□□□□ -0.89
RNU6-479P-201ENST00000516348 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
RNU6-479P-201ENST00000516348 DCBLD2Q96PD2 775 aa9.47□□□□□ -0.89
RNU6-479P-201ENST00000516348 POTEB2H3BUK9 544 aa9.45□□□□□ -0.9
RNU6-479P-201ENST00000516348 FBLN2P98095 1184 aa9.45□□□□□ -0.9
RNU6-479P-201ENST00000516348 ZNF692Q9BU19 519 aaPredicted RBP9.45□□□□□ -0.9
RNU6-479P-201ENST00000516348 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
RNU6-479P-201ENST00000516348 MKRN4PQ13434 485 aaPredicted RBP9.42□□□□□ -0.9
RNU6-479P-201ENST00000516348 FARP1Q9Y4F1 1045 aaPredicted RBP9.39□□□□□ -0.91
RNU6-479P-201ENST00000516348 CLCN6P51797 869 aa9.37□□□□□ -0.91
RNU6-479P-201ENST00000516348 GALR2O43603 387 aaPredicted RBP9.31□□□□□ -0.92
RNU6-479P-201ENST00000516348 PABPN1Q86U42 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
RNU6-479P-201ENST00000516348 ZNF579Q8NAF0 562 aaKnown RBP9.31□□□□□ -0.92
RNU6-479P-201ENST00000516348 PCDH10Q9P2E7 1040 aa9.3□□□□□ -0.92
RNU6-479P-201ENST00000516348 SLC4A1APQ9BWU0 796 aaKnown RBP9.29□□□□□ -0.92
RNU6-479P-201ENST00000516348 ZRANB1Q9UGI0 708 aa9.27□□□□□ -0.93
RNU6-479P-201ENST00000516348 ZBTB22O15209 634 aa9.26□□□□□ -0.93
RNU6-479P-201ENST00000516348 LCE2DQ5TA82 110 aaPredicted RBP9.25□□□□□ -0.93
RNU6-479P-201ENST00000516348 ATXN8OSP0DMR3 200 aa9.24□□□□□ -0.93
RNU6-479P-201ENST00000516348 PELP1Q8IZL8 1130 aaKnown RBP9.22□□□□□ -0.93
RNU6-479P-201ENST00000516348 POTEJP0CG39 1038 aa9.2□□□□□ -0.94
RNU6-479P-201ENST00000516348 FAM163AQ96GL9 167 aaPredicted RBP9.13□□□□□ -0.95
RNU6-479P-201ENST00000516348 PHF12Q96QT6 1004 aa9.12□□□□□ -0.95
RNU6-479P-201ENST00000516348 METRNQ9UJH8 293 aa9.1□□□□□ -0.95
RNU6-479P-201ENST00000516348 CREBZFQ9NS37 354 aa9.07□□□□□ -0.96
RNU6-479P-201ENST00000516348 ASTLQ6HA08 431 aaPredicted RBP9.01□□□□□ -0.97
RNU6-479P-201ENST00000516348 MAMSTRQ6ZN01 415 aa9.01□□□□□ -0.97
RNU6-479P-201ENST00000516348 ATMINO43313 823 aaPredicted RBP9□□□□□ -0.97
RNU6-479P-201ENST00000516348 C7P10643 843 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms