RNA–Protein interactions for RNA: ENST00000516016.1

RN7SKP19-201, Transcript of RNA, 7SK small nuclear pseudogene 19, humanhuman

BASIC

Gene RN7SKP19, Length 252 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP19-201ENST00000516016 ATMINO43313 823 aaPredicted RBP6.66□□□□□ -1.34
RN7SKP19-201ENST00000516016 MAMSTRQ6ZN01 415 aa6.66□□□□□ -1.34
RN7SKP19-201ENST00000516016 SLC39A7Q92504 469 aa6.66□□□□□ -1.34
RN7SKP19-201ENST00000516016 NPM1P06748 294 aaKnown RBP eCLIP6.65□□□□□ -1.34
RN7SKP19-201ENST00000516016 MS4A3Q96HJ5 214 aa6.65□□□□□ -1.34
RN7SKP19-201ENST00000516016 MNX1P50219 401 aaPredicted RBP6.63□□□□□ -1.35
RN7SKP19-201ENST00000516016 SCUBE2Q9NQ36 999 aa6.6□□□□□ -1.35
RN7SKP19-201ENST00000516016 ATN1P54259 1190 aaPredicted RBP6.58□□□□□ -1.36
RN7SKP19-201ENST00000516016 SPDYE4A6NLX3 237 aa6.57□□□□□ -1.36
RN7SKP19-201ENST00000516016 POTEFA5A3E0 1075 aa6.55□□□□□ -1.36
RN7SKP19-201ENST00000516016 TSPYL2Q9H2G4 693 aaPredicted RBP6.54□□□□□ -1.36
RN7SKP19-201ENST00000516016 CDAN1Q8IWY9 1227 aa6.53□□□□□ -1.36
RN7SKP19-201ENST00000516016 KIF12Q96FN5 646 aa6.51□□□□□ -1.37
RN7SKP19-201ENST00000516016 BMP2KQ9NSY1 1161 aaPredicted RBP6.51□□□□□ -1.37
RN7SKP19-201ENST00000516016 CCDC61Q9Y6R9 512 aa6.51□□□□□ -1.37
RN7SKP19-201ENST00000516016 TRPC6Q9Y210 931 aa6.5□□□□□ -1.37
RN7SKP19-201ENST00000516016 COLQQ9Y215 455 aaPredicted RBP6.48□□□□□ -1.37
RN7SKP19-201ENST00000516016 SEC24BO95487 1268 aa6.46□□□□□ -1.38
RN7SKP19-201ENST00000516016 TIE1P35590 1138 aa6.46□□□□□ -1.38
RN7SKP19-201ENST00000516016 CSRNP3Q8WYN3 585 aa6.46□□□□□ -1.38
RN7SKP19-201ENST00000516016 MAP3K13O43283 966 aa6.45□□□□□ -1.38
RN7SKP19-201ENST00000516016 TTLL13PA6NNM8 815 aa6.43□□□□□ -1.38
RN7SKP19-201ENST00000516016 ST18O60284 1047 aa6.43□□□□□ -1.38
RN7SKP19-201ENST00000516016 SLAIN1Q8ND83 568 aa6.41□□□□□ -1.38
RN7SKP19-201ENST00000516016 MMRN1Q13201 1228 aa6.4□□□□□ -1.38
RN7SKP19-201ENST00000516016 IER5LQ5T953 404 aa6.38□□□□□ -1.39
RN7SKP19-201ENST00000516016 SPNS2Q8IVW8 549 aa6.38□□□□□ -1.39
RN7SKP19-201ENST00000516016 TRIM35Q9UPQ4 493 aa6.38□□□□□ -1.39
RN7SKP19-201ENST00000516016 RASEFQ8IZ41 740 aa6.37□□□□□ -1.39
RN7SKP19-201ENST00000516016 PROM2Q8N271 834 aa6.34□□□□□ -1.39
RN7SKP19-201ENST00000516016 PCDHB13Q9Y5F0 798 aa6.33□□□□□ -1.4
RN7SKP19-201ENST00000516016 MIER1Q8N108 512 aa6.32□□□□□ -1.4
RN7SKP19-201ENST00000516016 SGIP1Q9BQI5 828 aa6.32□□□□□ -1.4
RN7SKP19-201ENST00000516016 PLEKHG5O94827 1062 aa6.31□□□□□ -1.4
RN7SKP19-201ENST00000516016 PLCG2P16885 1265 aa6.31□□□□□ -1.4
RN7SKP19-201ENST00000516016 TMEM121BQ9BXQ6 578 aaPredicted RBP6.31□□□□□ -1.4
RN7SKP19-201ENST00000516016 IFNL1Q8IU54 200 aa6.29□□□□□ -1.4
RN7SKP19-201ENST00000516016 MARVELD3Q96A59 401 aa6.29□□□□□ -1.4
RN7SKP19-201ENST00000516016 TMEM106CQ9BVX2 250 aa6.29□□□□□ -1.4
RN7SKP19-201ENST00000516016 IRX5P78411 483 aaPredicted RBP6.27□□□□□ -1.41
RN7SKP19-201ENST00000516016 SNPHO15079 494 aa6.26□□□□□ -1.41
RN7SKP19-201ENST00000516016 OCEL1Q9H607 264 aa6.24□□□□□ -1.41
RN7SKP19-201ENST00000516016 NUBP1P53384 320 aa6.23□□□□□ -1.41
RN7SKP19-201ENST00000516016 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.23□□□□□ -1.41
RN7SKP19-201ENST00000516016 PLCD3Q8N3E9 789 aa6.21□□□□□ -1.42
RN7SKP19-201ENST00000516016 EMP3P54852 163 aa6.2□□□□□ -1.42
RN7SKP19-201ENST00000516016 KRTAP3-3Q9BYR6 98 aa6.2□□□□□ -1.42
RN7SKP19-201ENST00000516016 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
RN7SKP19-201ENST00000516016 POTEB3A0JP26 581 aa6.19□□□□□ -1.42
RN7SKP19-201ENST00000516016 POTEBQ6S5H4 581 aa6.19□□□□□ -1.42
RN7SKP19-201ENST00000516016 EHMT2Q96KQ7 1210 aa6.18□□□□□ -1.42
RN7SKP19-201ENST00000516016 FAM212AQ96EL1 285 aa6.17□□□□□ -1.42
RN7SKP19-201ENST00000516016 HS3ST6Q96QI5 342 aa6.17□□□□□ -1.42
RN7SKP19-201ENST00000516016 ZBTB47Q9UFB7 747 aaPredicted RBP6.17□□□□□ -1.42
RN7SKP19-201ENST00000516016 FAM205CA6NFA0 338 aa6.16□□□□□ -1.42
RN7SKP19-201ENST00000516016 PYGBP11216 843 aa6.13□□□□□ -1.43
RN7SKP19-201ENST00000516016 C3orf67Q6ZVT6 689 aa6.13□□□□□ -1.43
RN7SKP19-201ENST00000516016 PDCD7Q8N8D1 485 aaKnown RBP6.13□□□□□ -1.43
RN7SKP19-201ENST00000516016 PCDHB8Q9UN66 801 aa6.13□□□□□ -1.43
RN7SKP19-201ENST00000516016 DCAF8Q5TAQ9 597 aa6.11□□□□□ -1.43
RN7SKP19-201ENST00000516016 L3MBTL3Q96JM7 780 aaPredicted RBP6.1□□□□□ -1.43
RN7SKP19-201ENST00000516016 GOLGA2Q08379 1002 aa6.06□□□□□ -1.44
RN7SKP19-201ENST00000516016 MKRN3Q13064 507 aaKnown RBP6.06□□□□□ -1.44
RN7SKP19-201ENST00000516016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.05□□□□□ -1.44
RN7SKP19-201ENST00000516016 HOXB3P14651 431 aaPredicted RBP6.04□□□□□ -1.44
RN7SKP19-201ENST00000516016 RNF166Q96A37 237 aaPredicted RBP6.04□□□□□ -1.44
RN7SKP19-201ENST00000516016 ERBB3P21860 1342 aa6.01□□□□□ -1.45
RN7SKP19-201ENST00000516016 HOXB1P14653 301 aaPredicted RBP6.01□□□□□ -1.45
RN7SKP19-201ENST00000516016 DPY19L2Q6NUT2 758 aa6.01□□□□□ -1.45
RN7SKP19-201ENST00000516016 ZNF467Q7Z7K2 595 aaPredicted RBP6□□□□□ -1.45
RN7SKP19-201ENST00000516016 ZNF710Q8N1W2 664 aa6□□□□□ -1.45
RN7SKP19-201ENST00000516016 MYT1LQ9UL68 1186 aa6□□□□□ -1.45
RN7SKP19-201ENST00000516016 ILDR1Q86SU0 546 aaPredicted RBP5.99□□□□□ -1.45
RN7SKP19-201ENST00000516016 PSEN1P49768 467 aa5.98□□□□□ -1.45
RN7SKP19-201ENST00000516016 BOLA1Q9Y3E2 137 aa5.97□□□□□ -1.45
RN7SKP19-201ENST00000516016 DOK7Q18PE1 504 aa5.96□□□□□ -1.46
RN7SKP19-201ENST00000516016 VARS2Q5ST30 1063 aaKnown RBP5.96□□□□□ -1.46
RN7SKP19-201ENST00000516016 G3V3G9 751 aa5.95□□□□□ -1.46
RN7SKP19-201ENST00000516016 CHRM1P11229 460 aaPredicted RBP5.94□□□□□ -1.46
RN7SKP19-201ENST00000516016 GSE1Q14687 1217 aa5.94□□□□□ -1.46
RN7SKP19-201ENST00000516016 RIMBP2O15034 1052 aa5.92□□□□□ -1.46
RN7SKP19-201ENST00000516016 ZNF687Q8N1G0 1237 aa5.92□□□□□ -1.46
RN7SKP19-201ENST00000516016 CABP2Q9NPB3 220 aa5.91□□□□□ -1.46
RN7SKP19-201ENST00000516016 PTGER2P43116 358 aa5.9□□□□□ -1.46
RN7SKP19-201ENST00000516016 PDAP1Q13442 181 aaKnown RBP5.9□□□□□ -1.46
RN7SKP19-201ENST00000516016 KLHL34Q8N239 644 aa5.89□□□□□ -1.47
RN7SKP19-201ENST00000516016 FKBP8Q14318 412 aa5.88□□□□□ -1.47
RN7SKP19-201ENST00000516016 ANKRD13DQ6ZTN6 518 aa5.88□□□□□ -1.47
RN7SKP19-201ENST00000516016 ZSWIM6Q9HCJ5 1215 aa5.87□□□□□ -1.47
RN7SKP19-201ENST00000516016 GPR153Q6NV75 609 aa5.86□□□□□ -1.47
RN7SKP19-201ENST00000516016 TMEM92Q6UXU6 159 aa5.85□□□□□ -1.47
RN7SKP19-201ENST00000516016 FBXO3Q9UK99 471 aa5.85□□□□□ -1.47
RN7SKP19-201ENST00000516016 ARSIQ5FYB1 569 aa5.82□□□□□ -1.48
RN7SKP19-201ENST00000516016 PLA2G2EQ9NZK7 142 aa5.82□□□□□ -1.48
RN7SKP19-201ENST00000516016 LSM11P83369 360 aaKnown RBP eCLIP5.81□□□□□ -1.48
RN7SKP19-201ENST00000516016 MICALL2Q8IY33 904 aa5.81□□□□□ -1.48
RN7SKP19-201ENST00000516016 EFCAB3Q8N7B9 438 aa5.81□□□□□ -1.48
RN7SKP19-201ENST00000516016 VASPP50552 380 aaPredicted RBP5.8□□□□□ -1.48
RN7SKP19-201ENST00000516016 KHSRPQ92945 711 aaKnown RBP eCLIP5.79□□□□□ -1.48
RN7SKP19-201ENST00000516016 ZNF316A6NFI3 1004 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms