RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 PPM1GO15355 546 aaPredicted RBP14.69□□□□□ -0.06
TRIM41-209ENST00000515834 TRHP20396 242 aaPredicted RBP14.69□□□□□ -0.06
TRIM41-209ENST00000515834 TAOK2Q9UL54 1235 aa14.68□□□□□ -0.06
TRIM41-209ENST00000515834 TPRNQ4KMQ1 711 aa14.64□□□□□ -0.07
TRIM41-209ENST00000515834 CCDC136Q96JN2 1154 aa14.64□□□□□ -0.07
TRIM41-209ENST00000515834 SCRIBQ14160 1630 aa14.63□□□□□ -0.07
TRIM41-209ENST00000515834 RGL3Q3MIN7 710 aa14.62□□□□□ -0.07
TRIM41-209ENST00000515834 NCBP3Q53F19 620 aaKnown RBP14.62□□□□□ -0.07
TRIM41-209ENST00000515834 HIRIP3Q9BW71 556 aaPredicted RBP14.6□□□□□ -0.07
TRIM41-209ENST00000515834 NBR1Q14596 966 aa14.59□□□□□ -0.07
TRIM41-209ENST00000515834 MTUS2Q5JR59 1369 aa14.59□□□□□ -0.07
TRIM41-209ENST00000515834 MRS2Q9HD23 443 aa14.59□□□□□ -0.07
TRIM41-209ENST00000515834 RRP7BPQ9NSQ0 103 aa14.58□□□□□ -0.07
TRIM41-209ENST00000515834 LAS1LQ9Y4W2 734 aaKnown RBP14.58□□□□□ -0.07
TRIM41-209ENST00000515834 SENP3-EIF4A1A0A087X0R7 540 aa14.58□□□□□ -0.08
TRIM41-209ENST00000515834 IRX6P78412 446 aaPredicted RBP14.56□□□□□ -0.08
TRIM41-209ENST00000515834 NCLP19338 710 aaKnown RBP14.54□□□□□ -0.08
TRIM41-209ENST00000515834 PLEKHD1A6NEE1 506 aa14.52□□□□□ -0.08
TRIM41-209ENST00000515834 MLECQ14165 292 aa14.51□□□□□ -0.09
TRIM41-209ENST00000515834 ZRSR1Q15695 479 aaKnown RBP14.51□□□□□ -0.09
TRIM41-209ENST00000515834 POGKQ9P215 609 aa14.51□□□□□ -0.09
TRIM41-209ENST00000515834 GOLGA2Q08379 1002 aa14.49□□□□□ -0.09
TRIM41-209ENST00000515834 CFAP53Q96M91 514 aa14.49□□□□□ -0.09
TRIM41-209ENST00000515834 NEUROD2Q15784 382 aa14.49□□□□□ -0.09
TRIM41-209ENST00000515834 ACIN1Q9UKV3 1341 aaKnown RBP14.48□□□□□ -0.09
TRIM41-209ENST00000515834 SOX12O15370 315 aa14.48□□□□□ -0.09
TRIM41-209ENST00000515834 CLSTN1O94985 981 aa14.47□□□□□ -0.09
TRIM41-209ENST00000515834 TNNT2P45379 298 aaPredicted RBP14.47□□□□□ -0.09
TRIM41-209ENST00000515834 ISY1Q9ULR0 285 aaKnown RBP14.45□□□□□ -0.1
TRIM41-209ENST00000515834 OS9Q13438 667 aaPredicted RBP14.45□□□□□ -0.1
TRIM41-209ENST00000515834 NAP1L2Q9ULW6 460 aaPredicted RBP14.45□□□□□ -0.1
TRIM41-209ENST00000515834 FTSJ3Q8IY81 847 aaKnown RBP14.44□□□□□ -0.1
TRIM41-209ENST00000515834 CASC1Q6TDU7 716 aa14.44□□□□□ -0.1
TRIM41-209ENST00000515834 KNSTRNQ9Y448 316 aa14.42□□□□□ -0.1
TRIM41-209ENST00000515834 MAPK8IP3Q9UPT6 1336 aa14.42□□□□□ -0.1
TRIM41-209ENST00000515834 EIF4G2P78344 907 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRIM41-209ENST00000515834 ERCC6Q03468 1493 aa14.39□□□□□ -0.11
TRIM41-209ENST00000515834 FGD1P98174 961 aa14.39□□□□□ -0.11
TRIM41-209ENST00000515834 BECN1Q14457 450 aa14.38□□□□□ -0.11
TRIM41-209ENST00000515834 CFDP1Q9UEE9 299 aaPredicted RBP14.37□□□□□ -0.11
TRIM41-209ENST00000515834 GOLGA6L22H0YM25 854 aa14.37□□□□□ -0.11
TRIM41-209ENST00000515834 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
TRIM41-209ENST00000515834 PTMAP06454 111 aaKnown RBP14.37□□□□□ -0.11
TRIM41-209ENST00000515834 TRIM44Q96DX7 344 aaPredicted RBP14.35□□□□□ -0.11
TRIM41-209ENST00000515834 KCNJ4P48050 445 aa14.35□□□□□ -0.11
TRIM41-209ENST00000515834 CCDC9Q9Y3X0 531 aaKnown RBP14.34□□□□□ -0.11
TRIM41-209ENST00000515834 CDCA8Q53HL2 280 aa14.34□□□□□ -0.11
TRIM41-209ENST00000515834 NUDCQ9Y266 331 aa14.34□□□□□ -0.11
TRIM41-209ENST00000515834 GLIPR1L2Q4G1C9 344 aa14.33□□□□□ -0.12
TRIM41-209ENST00000515834 CARD11Q9BXL7 1154 aa14.33□□□□□ -0.12
TRIM41-209ENST00000515834 PLCB2Q00722 1185 aa14.33□□□□□ -0.12
TRIM41-209ENST00000515834 SAFB2Q14151 953 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRIM41-209ENST00000515834 FRAT1Q92837 279 aaPredicted RBP14.32□□□□□ -0.12
TRIM41-209ENST00000515834 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
TRIM41-209ENST00000515834 DNTTIP2Q5QJE6 756 aaKnown RBP14.3□□□□□ -0.12
TRIM41-209ENST00000515834 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
TRIM41-209ENST00000515834 CC2D1BQ5T0F9 858 aaKnown RBP14.29□□□□□ -0.12
TRIM41-209ENST00000515834 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
TRIM41-209ENST00000515834 SRPK2P78362 688 aaKnown RBP14.27□□□□□ -0.12
TRIM41-209ENST00000515834 CSB-PGBD3P0DP91 1061 aa14.27□□□□□ -0.13
TRIM41-209ENST00000515834 DDRGK1Q96HY6 314 aa14.27□□□□□ -0.13
TRIM41-209ENST00000515834 ZCCHC6Q5VYS8 1495 aaKnown RBP14.26□□□□□ -0.13
TRIM41-209ENST00000515834 HDGFP51858 240 aaKnown RBP14.25□□□□□ -0.13
TRIM41-209ENST00000515834 TMX4Q9H1E5 349 aaPredicted RBP14.24□□□□□ -0.13
TRIM41-209ENST00000515834 STK26Q9P289 416 aa14.24□□□□□ -0.13
TRIM41-209ENST00000515834 RGS3P49796 1198 aa14.23□□□□□ -0.13
TRIM41-209ENST00000515834 AMER1Q5JTC6 1135 aaPredicted RBP14.22□□□□□ -0.13
TRIM41-209ENST00000515834 CLIP1P30622 1438 aa14.22□□□□□ -0.13
TRIM41-209ENST00000515834 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.21□□□□□ -0.13
TRIM41-209ENST00000515834 GGT6Q6P531 493 aa14.21□□□□□ -0.14
TRIM41-209ENST00000515834 RTF1Q92541 710 aaKnown RBP14.2□□□□□ -0.14
TRIM41-209ENST00000515834 PRM3Q9NNZ6 103 aa14.2□□□□□ -0.14
TRIM41-209ENST00000515834 HSP90AB1P08238 724 aaKnown RBP14.19□□□□□ -0.14
TRIM41-209ENST00000515834 PNNQ9H307 717 aaKnown RBP14.19□□□□□ -0.14
TRIM41-209ENST00000515834 MIER1Q8N108 512 aa14.19□□□□□ -0.14
TRIM41-209ENST00000515834 KANK1Q14678 1352 aa14.18□□□□□ -0.14
TRIM41-209ENST00000515834 GOLGA6L6A8MZA4 724 aa14.18□□□□□ -0.14
TRIM41-209ENST00000515834 G3V3G9 751 aa14.18□□□□□ -0.14
TRIM41-209ENST00000515834 DCAF8Q5TAQ9 597 aa14.18□□□□□ -0.14
TRIM41-209ENST00000515834 GNL2Q13823 731 aaKnown RBP14.17□□□□□ -0.14
TRIM41-209ENST00000515834 GOLGA6L4A6NEF3 574 aa14.16□□□□□ -0.14
TRIM41-209ENST00000515834 APBB1O00213 710 aa14.16□□□□□ -0.14
TRIM41-209ENST00000515834 ANP32EQ9BTT0 268 aa14.16□□□□□ -0.14
TRIM41-209ENST00000515834 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
TRIM41-209ENST00000515834 DCAF11Q8TEB1 546 aa14.14□□□□□ -0.15
TRIM41-209ENST00000515834 CHMP4BQ9H444 224 aaKnown RBP14.13□□□□□ -0.15
TRIM41-209ENST00000515834 MORC1Q86VD1 984 aa14.12□□□□□ -0.15
TRIM41-209ENST00000515834 CHMP3Q9Y3E7 222 aa14.12□□□□□ -0.15
TRIM41-209ENST00000515834 SUPT16HQ9Y5B9 1047 aaKnown RBP14.11□□□□□ -0.15
TRIM41-209ENST00000515834 TMF1P82094 1093 aa14.1□□□□□ -0.15
TRIM41-209ENST00000515834 AEBP2Q6ZN18 517 aaPredicted RBP14.1□□□□□ -0.15
TRIM41-209ENST00000515834 PDE4CQ08493 712 aa14.09□□□□□ -0.15
TRIM41-209ENST00000515834 CCNB3Q8WWL7 1395 aa14.08□□□□□ -0.15
TRIM41-209ENST00000515834 SPRYD3Q8NCJ5 442 aa14.08□□□□□ -0.15
TRIM41-209ENST00000515834 MS4A1P11836 297 aa14.08□□□□□ -0.16
TRIM41-209ENST00000515834 NRDCO43847 1150 aa14.07□□□□□ -0.16
TRIM41-209ENST00000515834 TAF7LQ5H9L4 462 aa14.07□□□□□ -0.16
TRIM41-209ENST00000515834 HDGFL2Q7Z4V5 671 aaPredicted RBP14.07□□□□□ -0.16
TRIM41-209ENST00000515834 MCCP23508 829 aa14.07□□□□□ -0.16
TRIM41-209ENST00000515834 GORABQ5T7V8 394 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 238.3 ms