RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 MS4A3Q96HJ5 214 aa10.14□□□□□ -0.79
HMGCR-213ENST00000515776 CCDC61Q9Y6R9 512 aa10.14□□□□□ -0.79
HMGCR-213ENST00000515776 RASEFQ8IZ41 740 aa10.12□□□□□ -0.79
HMGCR-213ENST00000515776 POTEGQ6S5H5 508 aa10.11□□□□□ -0.79
HMGCR-213ENST00000515776 PELP1Q8IZL8 1130 aaKnown RBP10.09□□□□□ -0.79
HMGCR-213ENST00000515776 KIF12Q96FN5 646 aa10.08□□□□□ -0.8
HMGCR-213ENST00000515776 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
HMGCR-213ENST00000515776 MAP3K13O43283 966 aa10.04□□□□□ -0.8
HMGCR-213ENST00000515776 ATMINO43313 823 aaPredicted RBP10.04□□□□□ -0.8
HMGCR-213ENST00000515776 ASTLQ6HA08 431 aaPredicted RBP10.04□□□□□ -0.8
HMGCR-213ENST00000515776 PCDH10Q9P2E7 1040 aa10.04□□□□□ -0.8
HMGCR-213ENST00000515776 NUBP1P53384 320 aa10.03□□□□□ -0.8
HMGCR-213ENST00000515776 POTEB2H3BUK9 544 aa10.02□□□□□ -0.81
HMGCR-213ENST00000515776 FBXO3Q9UK99 471 aa10.02□□□□□ -0.81
HMGCR-213ENST00000515776 TRPC6Q9Y210 931 aa10□□□□□ -0.81
HMGCR-213ENST00000515776 ATN1P54259 1190 aaPredicted RBP9.98□□□□□ -0.81
HMGCR-213ENST00000515776 SLC39A7Q92504 469 aa9.97□□□□□ -0.81
HMGCR-213ENST00000515776 METRNQ9UJH8 293 aa9.97□□□□□ -0.81
HMGCR-213ENST00000515776 C7P10643 843 aa9.96□□□□□ -0.82
HMGCR-213ENST00000515776 FAM212AQ96EL1 285 aa9.95□□□□□ -0.82
HMGCR-213ENST00000515776 OTUD5Q96G74 571 aa9.95□□□□□ -0.82
HMGCR-213ENST00000515776 BMP2KQ9NSY1 1161 aaPredicted RBP9.95□□□□□ -0.82
HMGCR-213ENST00000515776 PCDHB13Q9Y5F0 798 aa9.93□□□□□ -0.82
HMGCR-213ENST00000515776 TIE1P35590 1138 aa9.92□□□□□ -0.82
HMGCR-213ENST00000515776 DCAF8Q5TAQ9 597 aa9.91□□□□□ -0.82
HMGCR-213ENST00000515776 SGIP1Q9BQI5 828 aa9.91□□□□□ -0.82
HMGCR-213ENST00000515776 VASPP50552 380 aaPredicted RBP9.9□□□□□ -0.82
HMGCR-213ENST00000515776 TTLL13PA6NNM8 815 aa9.88□□□□□ -0.83
HMGCR-213ENST00000515776 POTEJP0CG39 1038 aa9.88□□□□□ -0.83
HMGCR-213ENST00000515776 IFNL1Q8IU54 200 aa9.88□□□□□ -0.83
HMGCR-213ENST00000515776 KLHL34Q8N239 644 aa9.88□□□□□ -0.83
HMGCR-213ENST00000515776 POTEFA5A3E0 1075 aa9.85□□□□□ -0.83
HMGCR-213ENST00000515776 PYGBP11216 843 aa9.85□□□□□ -0.83
HMGCR-213ENST00000515776 TRIM35Q9UPQ4 493 aa9.82□□□□□ -0.84
HMGCR-213ENST00000515776 SEC24BO95487 1268 aa9.8□□□□□ -0.84
HMGCR-213ENST00000515776 MAMSTRQ6ZN01 415 aa9.8□□□□□ -0.84
HMGCR-213ENST00000515776 TMEM106CQ9BVX2 250 aa9.8□□□□□ -0.84
HMGCR-213ENST00000515776 COLQQ9Y215 455 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-213ENST00000515776 GSE1Q14687 1217 aa9.77□□□□□ -0.85
HMGCR-213ENST00000515776 PCDHB8Q9UN66 801 aa9.77□□□□□ -0.85
HMGCR-213ENST00000515776 IER5LQ5T953 404 aa9.76□□□□□ -0.85
HMGCR-213ENST00000515776 IFNLR1Q8IU57 520 aaPredicted RBP9.75□□□□□ -0.85
HMGCR-213ENST00000515776 SCUBE2Q9NQ36 999 aa9.75□□□□□ -0.85
HMGCR-213ENST00000515776 SPOCK2Q92563 424 aa9.7□□□□□ -0.86
HMGCR-213ENST00000515776 CHRM1P11229 460 aaPredicted RBP9.69□□□□□ -0.86
HMGCR-213ENST00000515776 PLCG2P16885 1265 aa9.67□□□□□ -0.86
HMGCR-213ENST00000515776 IRX5P78411 483 aaPredicted RBP9.67□□□□□ -0.86
HMGCR-213ENST00000515776 ZNF467Q7Z7K2 595 aaPredicted RBP9.67□□□□□ -0.86
HMGCR-213ENST00000515776 CIZ1Q9ULV3 898 aaPredicted RBP9.67□□□□□ -0.86
HMGCR-213ENST00000515776 FAM163AQ96GL9 167 aaPredicted RBP9.65□□□□□ -0.86
HMGCR-213ENST00000515776 OCEL1Q9H607 264 aa9.63□□□□□ -0.87
HMGCR-213ENST00000515776 PSEN1P49768 467 aa9.61□□□□□ -0.87
HMGCR-213ENST00000515776 LCE2DQ5TA82 110 aaPredicted RBP9.6□□□□□ -0.87
HMGCR-213ENST00000515776 SLAIN1Q8ND83 568 aa9.59□□□□□ -0.87
HMGCR-213ENST00000515776 GOLGA2Q08379 1002 aa9.58□□□□□ -0.88
HMGCR-213ENST00000515776 MKRN3Q13064 507 aaKnown RBP9.57□□□□□ -0.88
HMGCR-213ENST00000515776 PDAP1Q13442 181 aaKnown RBP9.56□□□□□ -0.88
HMGCR-213ENST00000515776 PDCD7Q8N8D1 485 aaKnown RBP9.53□□□□□ -0.88
HMGCR-213ENST00000515776 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.52□□□□□ -0.89
HMGCR-213ENST00000515776 CABP2Q9NPB3 220 aa9.5□□□□□ -0.89
HMGCR-213ENST00000515776 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.5□□□□□ -0.89
HMGCR-213ENST00000515776 TRIM41Q8WV44 630 aa9.47□□□□□ -0.89
HMGCR-213ENST00000515776 L3MBTL3Q96JM7 780 aaPredicted RBP9.47□□□□□ -0.89
HMGCR-213ENST00000515776 ST18O60284 1047 aa9.46□□□□□ -0.9
HMGCR-213ENST00000515776 DPY19L2Q6NUT2 758 aa9.45□□□□□ -0.9
HMGCR-213ENST00000515776 ILDR1Q86SU0 546 aaPredicted RBP9.45□□□□□ -0.9
HMGCR-213ENST00000515776 C3orf67Q6ZVT6 689 aa9.43□□□□□ -0.9
HMGCR-213ENST00000515776 SNPHO15079 494 aa9.39□□□□□ -0.91
HMGCR-213ENST00000515776 EFCAB3Q8N7B9 438 aa9.39□□□□□ -0.91
HMGCR-213ENST00000515776 RNF25Q96BH1 459 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-213ENST00000515776 RIOK3O14730 519 aaKnown RBP9.38□□□□□ -0.91
HMGCR-213ENST00000515776 CDAN1Q8IWY9 1227 aa9.37□□□□□ -0.91
HMGCR-213ENST00000515776 BOLA1Q9Y3E2 137 aa9.37□□□□□ -0.91
HMGCR-213ENST00000515776 G3V3G9 751 aa9.36□□□□□ -0.91
HMGCR-213ENST00000515776 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.35□□□□□ -0.91
HMGCR-213ENST00000515776 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
HMGCR-213ENST00000515776 VGFO15240 615 aaPredicted RBP9.33□□□□□ -0.92
HMGCR-213ENST00000515776 MMRN1Q13201 1228 aa9.33□□□□□ -0.92
HMGCR-213ENST00000515776 TMEM121BQ9BXQ6 578 aaPredicted RBP9.33□□□□□ -0.92
HMGCR-213ENST00000515776 MARVELD3Q96A59 401 aa9.32□□□□□ -0.92
HMGCR-213ENST00000515776 SOX12O15370 315 aa9.29□□□□□ -0.92
HMGCR-213ENST00000515776 PHF8Q9UPP1 1060 aa9.26□□□□□ -0.93
HMGCR-213ENST00000515776 ECM2O94769 699 aaPredicted RBP9.25□□□□□ -0.93
HMGCR-213ENST00000515776 MS4A4AQ96JQ5 239 aa9.25□□□□□ -0.93
HMGCR-213ENST00000515776 BCL11BQ9C0K0 894 aaPredicted RBP9.24□□□□□ -0.93
HMGCR-213ENST00000515776 HOXB3P14651 431 aaPredicted RBP9.23□□□□□ -0.93
HMGCR-213ENST00000515776 EMP3P54852 163 aa9.23□□□□□ -0.93
HMGCR-213ENST00000515776 MICALL2Q8IY33 904 aa9.23□□□□□ -0.93
HMGCR-213ENST00000515776 TAOK2Q9UL54 1235 aa9.23□□□□□ -0.93
HMGCR-213ENST00000515776 PKD2Q13563 968 aa9.22□□□□□ -0.93
HMGCR-213ENST00000515776 STK24Q9Y6E0 443 aa9.22□□□□□ -0.93
HMGCR-213ENST00000515776 TMEM92Q6UXU6 159 aa9.2□□□□□ -0.94
HMGCR-213ENST00000515776 FAM205CA6NFA0 338 aa9.19□□□□□ -0.94
HMGCR-213ENST00000515776 NLRP6P59044 892 aa9.19□□□□□ -0.94
HMGCR-213ENST00000515776 POTEB3A0JP26 581 aa9.18□□□□□ -0.94
HMGCR-213ENST00000515776 STK25O00506 426 aa9.18□□□□□ -0.94
HMGCR-213ENST00000515776 RGL2O15211 777 aa9.18□□□□□ -0.94
HMGCR-213ENST00000515776 POTEBQ6S5H4 581 aa9.18□□□□□ -0.94
HMGCR-213ENST00000515776 SPNS2Q8IVW8 549 aa9.18□□□□□ -0.94
HMGCR-213ENST00000515776 ZNF710Q8N1W2 664 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms