RNA–Protein interactions for RNA: ENST00000515728.1

LINC01216-201, Transcript of long intergenic non-protein coding RNA 1216, humanhuman

TSL 5 BASIC

Gene LINC01216, Length 824 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01216-201ENST00000515728 CCDC61Q9Y6R9 512 aa16.68■□□□□ 0.26
LINC01216-201ENST00000515728 MS4A3Q96HJ5 214 aa16.67■□□□□ 0.26
LINC01216-201ENST00000515728 ASTLQ6HA08 431 aaPredicted RBP16.6■□□□□ 0.25
LINC01216-201ENST00000515728 SLC39A7Q92504 469 aa16.6■□□□□ 0.25
LINC01216-201ENST00000515728 KIF12Q96FN5 646 aa16.6■□□□□ 0.25
LINC01216-201ENST00000515728 C7P10643 843 aa16.59■□□□□ 0.25
LINC01216-201ENST00000515728 RASEFQ8IZ41 740 aa16.58■□□□□ 0.24
LINC01216-201ENST00000515728 ATMINO43313 823 aaPredicted RBP16.55■□□□□ 0.24
LINC01216-201ENST00000515728 FAM212AQ96EL1 285 aa16.53■□□□□ 0.24
LINC01216-201ENST00000515728 SGIP1Q9BQI5 828 aa16.51■□□□□ 0.23
LINC01216-201ENST00000515728 MAP3K13O43283 966 aa16.5■□□□□ 0.23
LINC01216-201ENST00000515728 METRNQ9UJH8 293 aa16.5■□□□□ 0.23
LINC01216-201ENST00000515728 PELP1Q8IZL8 1130 aaKnown RBP16.48■□□□□ 0.23
LINC01216-201ENST00000515728 TIE1P35590 1138 aa16.46■□□□□ 0.23
LINC01216-201ENST00000515728 NUBP1P53384 320 aa16.46■□□□□ 0.23
LINC01216-201ENST00000515728 MAMSTRQ6ZN01 415 aa16.45■□□□□ 0.22
LINC01216-201ENST00000515728 PCDHB13Q9Y5F0 798 aa16.42■□□□□ 0.22
LINC01216-201ENST00000515728 ATN1P54259 1190 aaPredicted RBP16.4■□□□□ 0.22
LINC01216-201ENST00000515728 DCAF8Q5TAQ9 597 aa16.38■□□□□ 0.21
LINC01216-201ENST00000515728 BMP2KQ9NSY1 1161 aaPredicted RBP16.38■□□□□ 0.21
LINC01216-201ENST00000515728 KLHL34Q8N239 644 aa16.37■□□□□ 0.21
LINC01216-201ENST00000515728 OTUD5Q96G74 571 aa16.36■□□□□ 0.21
LINC01216-201ENST00000515728 POTEB2H3BUK9 544 aa16.33■□□□□ 0.2
LINC01216-201ENST00000515728 SEC24BO95487 1268 aa16.32■□□□□ 0.2
LINC01216-201ENST00000515728 SCUBE2Q9NQ36 999 aa16.31■□□□□ 0.2
LINC01216-201ENST00000515728 TTLL13PA6NNM8 815 aa16.28■□□□□ 0.2
LINC01216-201ENST00000515728 VASPP50552 380 aaPredicted RBP16.28■□□□□ 0.2
LINC01216-201ENST00000515728 GSE1Q14687 1217 aa16.26■□□□□ 0.19
LINC01216-201ENST00000515728 IER5LQ5T953 404 aa16.26■□□□□ 0.19
LINC01216-201ENST00000515728 TRPC6Q9Y210 931 aa16.26■□□□□ 0.19
LINC01216-201ENST00000515728 IFNL1Q8IU54 200 aa16.23■□□□□ 0.19
LINC01216-201ENST00000515728 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.19
LINC01216-201ENST00000515728 TMEM106CQ9BVX2 250 aa16.19■□□□□ 0.18
LINC01216-201ENST00000515728 PYGBP11216 843 aa16.17■□□□□ 0.18
LINC01216-201ENST00000515728 PLCG2P16885 1265 aa16.09■□□□□ 0.17
LINC01216-201ENST00000515728 ZNF467Q7Z7K2 595 aaPredicted RBP16.09■□□□□ 0.17
LINC01216-201ENST00000515728 POTEJP0CG39 1038 aa16.08■□□□□ 0.16
LINC01216-201ENST00000515728 POTEFA5A3E0 1075 aa16.06■□□□□ 0.16
LINC01216-201ENST00000515728 COLQQ9Y215 455 aaPredicted RBP16.06■□□□□ 0.16
LINC01216-201ENST00000515728 CHRM1P11229 460 aaPredicted RBP16.04■□□□□ 0.16
LINC01216-201ENST00000515728 SPOCK2Q92563 424 aa16.04■□□□□ 0.16
LINC01216-201ENST00000515728 GOLGA2Q08379 1002 aa16.02■□□□□ 0.16
LINC01216-201ENST00000515728 PCDHB8Q9UN66 801 aa16.02■□□□□ 0.16
LINC01216-201ENST00000515728 POTEMA6NI47 508 aa15.99■□□□□ 0.15
LINC01216-201ENST00000515728 OCEL1Q9H607 264 aa15.98■□□□□ 0.15
LINC01216-201ENST00000515728 FAM163AQ96GL9 167 aaPredicted RBP15.97■□□□□ 0.15
LINC01216-201ENST00000515728 POTEGQ6S5H5 508 aa15.96■□□□□ 0.15
LINC01216-201ENST00000515728 PCDH10Q9P2E7 1040 aa15.96■□□□□ 0.15
LINC01216-201ENST00000515728 CIZ1Q9ULV3 898 aaPredicted RBP15.96■□□□□ 0.15
LINC01216-201ENST00000515728 MKRN3Q13064 507 aaKnown RBP15.93■□□□□ 0.14
LINC01216-201ENST00000515728 IRX5P78411 483 aaPredicted RBP15.92■□□□□ 0.14
LINC01216-201ENST00000515728 PLSCR2Q9NRY7 297 aa15.91■□□□□ 0.14
LINC01216-201ENST00000515728 IFNLR1Q8IU57 520 aaPredicted RBP15.9■□□□□ 0.14
LINC01216-201ENST00000515728 SLAIN1Q8ND83 568 aa15.88■□□□□ 0.13
LINC01216-201ENST00000515728 PSEN1P49768 467 aa15.86■□□□□ 0.13
LINC01216-201ENST00000515728 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
LINC01216-201ENST00000515728 PDAP1Q13442 181 aaKnown RBP15.83■□□□□ 0.12
LINC01216-201ENST00000515728 L3MBTL3Q96JM7 780 aaPredicted RBP15.82■□□□□ 0.12
LINC01216-201ENST00000515728 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.82■□□□□ 0.12
LINC01216-201ENST00000515728 SNPHO15079 494 aa15.79■□□□□ 0.12
LINC01216-201ENST00000515728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.75■□□□□ 0.11
LINC01216-201ENST00000515728 C3orf67Q6ZVT6 689 aa15.73■□□□□ 0.11
LINC01216-201ENST00000515728 G3V3G9 751 aa15.72■□□□□ 0.11
LINC01216-201ENST00000515728 LCE2DQ5TA82 110 aaPredicted RBP15.65■□□□□ 0.1
LINC01216-201ENST00000515728 CABP2Q9NPB3 220 aa15.65■□□□□ 0.1
LINC01216-201ENST00000515728 PDCD7Q8N8D1 485 aaKnown RBP15.64■□□□□ 0.09
LINC01216-201ENST00000515728 TMEM121BQ9BXQ6 578 aaPredicted RBP15.61■□□□□ 0.09
LINC01216-201ENST00000515728 ST18O60284 1047 aa15.59■□□□□ 0.09
LINC01216-201ENST00000515728 TAOK2Q9UL54 1235 aa15.55■□□□□ 0.08
LINC01216-201ENST00000515728 ILDR1Q86SU0 546 aaPredicted RBP15.52■□□□□ 0.08
LINC01216-201ENST00000515728 CDAN1Q8IWY9 1227 aa15.52■□□□□ 0.08
LINC01216-201ENST00000515728 RIOK3O14730 519 aaKnown RBP15.5■□□□□ 0.07
LINC01216-201ENST00000515728 BOLA1Q9Y3E2 137 aa15.5■□□□□ 0.07
LINC01216-201ENST00000515728 VGFO15240 615 aaPredicted RBP15.46■□□□□ 0.07
LINC01216-201ENST00000515728 SOX12O15370 315 aa15.42■□□□□ 0.06
LINC01216-201ENST00000515728 DPY19L2Q6NUT2 758 aa15.42■□□□□ 0.06
LINC01216-201ENST00000515728 EFCAB3Q8N7B9 438 aa15.42■□□□□ 0.06
LINC01216-201ENST00000515728 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.34■□□□□ 0.05
LINC01216-201ENST00000515728 EMP3P54852 163 aa15.34■□□□□ 0.05
LINC01216-201ENST00000515728 ZFP91Q96JP5 570 aaPredicted RBP15.34■□□□□ 0.05
LINC01216-201ENST00000515728 ZNF710Q8N1W2 664 aa15.32■□□□□ 0.04
LINC01216-201ENST00000515728 MARVELD3Q96A59 401 aa15.32■□□□□ 0.04
LINC01216-201ENST00000515728 DOK7Q18PE1 504 aa15.3■□□□□ 0.04
LINC01216-201ENST00000515728 RIMBP2O15034 1052 aa15.29■□□□□ 0.04
LINC01216-201ENST00000515728 RNF25Q96BH1 459 aaPredicted RBP15.26■□□□□ 0.03
LINC01216-201ENST00000515728 NLRP6P59044 892 aa15.24■□□□□ 0.03
LINC01216-201ENST00000515728 ECM2O94769 699 aaPredicted RBP15.23■□□□□ 0.03
LINC01216-201ENST00000515728 MICALL2Q8IY33 904 aa15.21■□□□□ 0.03
LINC01216-201ENST00000515728 BCL11BQ9C0K0 894 aaPredicted RBP15.2■□□□□ 0.02
LINC01216-201ENST00000515728 STK24Q9Y6E0 443 aa15.2■□□□□ 0.02
LINC01216-201ENST00000515728 FAM205CA6NFA0 338 aa15.19■□□□□ 0.02
LINC01216-201ENST00000515728 PHF8Q9UPP1 1060 aa15.19■□□□□ 0.02
LINC01216-201ENST00000515728 STK25O00506 426 aa15.15■□□□□ 0.02
LINC01216-201ENST00000515728 HOXB1P14653 301 aaPredicted RBP15.15■□□□□ 0.02
LINC01216-201ENST00000515728 HS3ST6Q96QI5 342 aa15.15■□□□□ 0.02
LINC01216-201ENST00000515728 HOXB3P14651 431 aaPredicted RBP15.13■□□□□ 0.01
LINC01216-201ENST00000515728 ZSWIM6Q9HCJ5 1215 aa15.13■□□□□ 0.01
LINC01216-201ENST00000515728 ERBB3P21860 1342 aa15.11■□□□□ 0.01
LINC01216-201ENST00000515728 SPNS2Q8IVW8 549 aa15.1■□□□□ 0.01
LINC01216-201ENST00000515728 MS4A4AQ96JQ5 239 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms