RNA–Protein interactions for RNA: ENST00000514970.2

AFF1-210, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 3

Gene AFF1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-210ENST00000514970 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
AFF1-210ENST00000514970 FANCD2Q9BXW9 1451 aa18.35■□□□□ 0.53
AFF1-210ENST00000514970 SSUH2Q9Y2M2 353 aa18.35■□□□□ 0.53
AFF1-210ENST00000514970 POTEHQ6S545 545 aa18.34■□□□□ 0.53
AFF1-210ENST00000514970 WDR62O43379 1518 aa18.33■□□□□ 0.53
AFF1-210ENST00000514970 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.52
AFF1-210ENST00000514970 PITPNM1O00562 1244 aa18.25■□□□□ 0.51
AFF1-210ENST00000514970 DNAJC5Q9H3Z4 198 aa18.24■□□□□ 0.51
AFF1-210ENST00000514970 URB2Q14146 1524 aaKnown RBP18.2■□□□□ 0.5
AFF1-210ENST00000514970 SPDYE1Q8NFV5 336 aaPredicted RBP18.1■□□□□ 0.49
AFF1-210ENST00000514970 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
AFF1-210ENST00000514970 CLEC11AQ9Y240 323 aa18.07■□□□□ 0.48
AFF1-210ENST00000514970 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
AFF1-210ENST00000514970 PIP4P2Q8N4L2 257 aa18.04■□□□□ 0.48
AFF1-210ENST00000514970 SUPT5HO00267 1087 aaKnown RBP18.03■□□□□ 0.48
AFF1-210ENST00000514970 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
AFF1-210ENST00000514970 FXR2P51116 673 aaKnown RBP eCLIP18■□□□□ 0.47
AFF1-210ENST00000514970 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
AFF1-210ENST00000514970 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
AFF1-210ENST00000514970 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
AFF1-210ENST00000514970 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
AFF1-210ENST00000514970 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
AFF1-210ENST00000514970 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
AFF1-210ENST00000514970 CUX1P39880 1505 aa17.85■□□□□ 0.45
AFF1-210ENST00000514970 PRR29P0C7W0 189 aa17.83■□□□□ 0.44
AFF1-210ENST00000514970 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
AFF1-210ENST00000514970 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
AFF1-210ENST00000514970 AQRO60306 1485 aaKnown RBP eCLIP17.78■□□□□ 0.441e-6■■■■■ 26.9
AFF1-210ENST00000514970 PRKAR2AP13861 404 aaKnown RBP17.78■□□□□ 0.44
AFF1-210ENST00000514970 CHD1O14646 1710 aa17.78■□□□□ 0.44
AFF1-210ENST00000514970 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
AFF1-210ENST00000514970 SOGA1O94964 1423 aa17.75■□□□□ 0.43
AFF1-210ENST00000514970 PROM2Q8N271 834 aa17.73■□□□□ 0.43
AFF1-210ENST00000514970 STAG3Q9UJ98 1225 aa17.72■□□□□ 0.43
AFF1-210ENST00000514970 TDRD9Q8NDG6 1382 aaKnown RBP17.7■□□□□ 0.42
AFF1-210ENST00000514970 CHADLQ6NUI6 762 aa17.69■□□□□ 0.42
AFF1-210ENST00000514970 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
AFF1-210ENST00000514970 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
AFF1-210ENST00000514970 FKBP8Q14318 412 aa17.66■□□□□ 0.42
AFF1-210ENST00000514970 SYNJ1O43426 1573 aa17.66■□□□□ 0.42
AFF1-210ENST00000514970 SNAPC4Q5SXM2 1469 aa17.64■□□□□ 0.41
AFF1-210ENST00000514970 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
AFF1-210ENST00000514970 RIMBP3CA6NJZ7 1639 aa17.63■□□□□ 0.41
AFF1-210ENST00000514970 RIMBP3BA6NNM3 1639 aa17.63■□□□□ 0.41
AFF1-210ENST00000514970 RIMBP3Q9UFD9 1639 aa17.63■□□□□ 0.41
AFF1-210ENST00000514970 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
AFF1-210ENST00000514970 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
AFF1-210ENST00000514970 ABCA5Q8WWZ7 1642 aa17.61■□□□□ 0.41
AFF1-210ENST00000514970 ABCA10Q8WWZ4 1543 aa17.6■□□□□ 0.41
AFF1-210ENST00000514970 GRIN2BQ13224 1484 aa17.59■□□□□ 0.41
AFF1-210ENST00000514970 HAX1O00165 279 aa17.58■□□□□ 0.4
AFF1-210ENST00000514970 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
AFF1-210ENST00000514970 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
AFF1-210ENST00000514970 ARHGEF11O15085 1522 aa17.56■□□□□ 0.4
AFF1-210ENST00000514970 SYNJ2O15056 1496 aa17.51■□□□□ 0.39
AFF1-210ENST00000514970 CREBZFQ9NS37 354 aa17.51■□□□□ 0.39
AFF1-210ENST00000514970 CLASP1Q7Z460 1538 aa17.49■□□□□ 0.39
AFF1-210ENST00000514970 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
AFF1-210ENST00000514970 ADAMTS12P58397 1594 aa17.47■□□□□ 0.39
AFF1-210ENST00000514970 FARP1Q9Y4F1 1045 aaPredicted RBP17.46■□□□□ 0.39
AFF1-210ENST00000514970 EVX2Q03828 476 aa17.43■□□□□ 0.38
AFF1-210ENST00000514970 ARAP1Q96P48 1450 aa17.41■□□□□ 0.38
AFF1-210ENST00000514970 C19orf67A6NJJ6 358 aa17.4■□□□□ 0.38
AFF1-210ENST00000514970 SP7Q8TDD2 431 aaPredicted RBP17.4■□□□□ 0.38
AFF1-210ENST00000514970 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.37
AFF1-210ENST00000514970 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
AFF1-210ENST00000514970 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
AFF1-210ENST00000514970 FHAD1B1AJZ9 1412 aa17.34■□□□□ 0.37
AFF1-210ENST00000514970 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
AFF1-210ENST00000514970 NUP160Q12769 1436 aa17.29■□□□□ 0.36
AFF1-210ENST00000514970 MNX1P50219 401 aaPredicted RBP17.27■□□□□ 0.36
AFF1-210ENST00000514970 ERCC6L2Q5T890 1561 aa17.27■□□□□ 0.35
AFF1-210ENST00000514970 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
AFF1-210ENST00000514970 CUL7Q14999 1698 aa17.24■□□□□ 0.35
AFF1-210ENST00000514970 CD44P16070 742 aaKnown RBP17.24■□□□□ 0.35
AFF1-210ENST00000514970 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
AFF1-210ENST00000514970 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.35
AFF1-210ENST00000514970 MIER1Q8N108 512 aa17.21■□□□□ 0.35
AFF1-210ENST00000514970 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
AFF1-210ENST00000514970 IGF1RP08069 1367 aa17.16■□□□□ 0.34
AFF1-210ENST00000514970 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
AFF1-210ENST00000514970 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
AFF1-210ENST00000514970 PLCD3Q8N3E9 789 aa17.12■□□□□ 0.33
AFF1-210ENST00000514970 PRG4Q92954 1404 aaPredicted RBP17.11■□□□□ 0.33
AFF1-210ENST00000514970 CARMIL1Q5VZK9 1371 aa17.07■□□□□ 0.32
AFF1-210ENST00000514970 ZRANB1Q9UGI0 708 aa17.07■□□□□ 0.32
AFF1-210ENST00000514970 KIAA0586Q9BVV6 1533 aa17.06■□□□□ 0.32
AFF1-210ENST00000514970 JPH4Q96JJ6 628 aa17.06■□□□□ 0.32
AFF1-210ENST00000514970 GABBR2O75899 941 aa17.04■□□□□ 0.32
AFF1-210ENST00000514970 IQGAP2Q13576 1575 aa17■□□□□ 0.31
AFF1-210ENST00000514970 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
AFF1-210ENST00000514970 ZNF579Q8NAF0 562 aaKnown RBP16.98■□□□□ 0.31
AFF1-210ENST00000514970 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
AFF1-210ENST00000514970 CTTNBP2Q8WZ74 1663 aa16.96■□□□□ 0.31
AFF1-210ENST00000514970 ADCY10Q96PN6 1610 aa16.96■□□□□ 0.3
AFF1-210ENST00000514970 VASPP50552 380 aaPredicted RBP16.93■□□□□ 0.3
AFF1-210ENST00000514970 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
AFF1-210ENST00000514970 KIF13AQ9H1H9 1805 aa16.93■□□□□ 0.3
AFF1-210ENST00000514970 TSPYL2Q9H2G4 693 aaPredicted RBP16.9■□□□□ 0.3
AFF1-210ENST00000514970 CLCN6P51797 869 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms