RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 PPP1R15AO75807 674 aaPredicted RBP21.54■■□□□ 1.04
TRIO-221ENST00000513206 NACADO15069 1562 aa21.51■■□□□ 1.03
TRIO-221ENST00000513206 FKBP8Q14318 412 aa21.5■■□□□ 1.03
TRIO-221ENST00000513206 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.48■■□□□ 1.03
TRIO-221ENST00000513206 HAP1P54257 671 aaPredicted RBP21.45■■□□□ 1.02
TRIO-221ENST00000513206 BAZ1BQ9UIG0 1483 aaKnown RBP21.44■■□□□ 1.02
TRIO-221ENST00000513206 MYH16Q9H6N6 1097 aa21.41■■□□□ 1.02
TRIO-221ENST00000513206 RRP7BPQ9NSQ0 103 aa21.38■■□□□ 1.01
TRIO-221ENST00000513206 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
TRIO-221ENST00000513206 PLEKHD1A6NEE1 506 aa21.38■■□□□ 1.01
TRIO-221ENST00000513206 CLIP1P30622 1438 aa21.35■■□□□ 1.01
TRIO-221ENST00000513206 DCAF1Q9Y4B6 1507 aa21.35■■□□□ 1.01
TRIO-221ENST00000513206 CCDC136Q96JN2 1154 aa21.34■■□□□ 1.01
TRIO-221ENST00000513206 MRS2Q9HD23 443 aa21.31■■□□□ 1
TRIO-221ENST00000513206 RGL3Q3MIN7 710 aa21.3■■□□□ 1
TRIO-221ENST00000513206 ARXQ96QS3 562 aa21.3■■□□□ 1
TRIO-221ENST00000513206 HIRIP3Q9BW71 556 aaPredicted RBP21.27■■□□□ 1
TRIO-221ENST00000513206 EIF4G2P78344 907 aaKnown RBP eCLIP21.25■□□□□ 0.99
TRIO-221ENST00000513206 PPM1GO15355 546 aaPredicted RBP21.25■□□□□ 0.99
TRIO-221ENST00000513206 GOLGA3Q08378 1498 aa21.25■□□□□ 0.99
TRIO-221ENST00000513206 EIF4G1Q04637 1599 aaKnown RBP21.21■□□□□ 0.99
TRIO-221ENST00000513206 CDK11BP21127 795 aaKnown RBP21.21■□□□□ 0.99
TRIO-221ENST00000513206 CFDP1Q9UEE9 299 aaPredicted RBP21.2■□□□□ 0.98
TRIO-221ENST00000513206 KIF27Q86VH2 1401 aa21.19■□□□□ 0.98
TRIO-221ENST00000513206 TNNT2P45379 298 aaPredicted RBP21.19■□□□□ 0.98
TRIO-221ENST00000513206 TRHP20396 242 aaPredicted RBP21.18■□□□□ 0.98
TRIO-221ENST00000513206 LMOD2Q6P5Q4 547 aa21.18■□□□□ 0.98
TRIO-221ENST00000513206 NPHP1O15259 732 aa21.15■□□□□ 0.98
TRIO-221ENST00000513206 CFAP53Q96M91 514 aa21.14■□□□□ 0.97
TRIO-221ENST00000513206 KNSTRNQ9Y448 316 aa21.13■□□□□ 0.97
TRIO-221ENST00000513206 CDCA8Q53HL2 280 aa21.13■□□□□ 0.97
TRIO-221ENST00000513206 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
TRIO-221ENST00000513206 EEA1Q15075 1411 aa21.1■□□□□ 0.97
TRIO-221ENST00000513206 RTN4Q9NQC3 1192 aaKnown RBP21.1■□□□□ 0.97
TRIO-221ENST00000513206 POGKQ9P215 609 aa21.1■□□□□ 0.97
TRIO-221ENST00000513206 BAZ1AQ9NRL2 1556 aaPredicted RBP21.09■□□□□ 0.97
TRIO-221ENST00000513206 ERICH6BQ5W0A0 696 aa21.08■□□□□ 0.97
TRIO-221ENST00000513206 CEP162Q5TB80 1403 aa21.08■□□□□ 0.96
TRIO-221ENST00000513206 IRX6P78412 446 aaPredicted RBP21.08■□□□□ 0.96
TRIO-221ENST00000513206 LAS1LQ9Y4W2 734 aaKnown RBP21.07■□□□□ 0.96
TRIO-221ENST00000513206 KAT6BQ8WYB5 2073 aa21.06■□□□□ 0.96
TRIO-221ENST00000513206 FTSJ3Q8IY81 847 aaKnown RBP21.06■□□□□ 0.96
TRIO-221ENST00000513206 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
TRIO-221ENST00000513206 CARD11Q9BXL7 1154 aa21.01■□□□□ 0.95
TRIO-221ENST00000513206 CASC1Q6TDU7 716 aa21.01■□□□□ 0.95
TRIO-221ENST00000513206 TULP1O00294 542 aaPredicted RBP20.99■□□□□ 0.95
TRIO-221ENST00000513206 KANK1Q14678 1352 aa20.98■□□□□ 0.95
TRIO-221ENST00000513206 DEKP35659 375 aaKnown RBP20.97■□□□□ 0.95
TRIO-221ENST00000513206 NCLP19338 710 aaKnown RBP20.97■□□□□ 0.95
TRIO-221ENST00000513206 BECN1Q14457 450 aa20.97■□□□□ 0.95
TRIO-221ENST00000513206 MLECQ14165 292 aa20.97■□□□□ 0.95
TRIO-221ENST00000513206 MIER1Q8N108 512 aa20.97■□□□□ 0.95
TRIO-221ENST00000513206 MAPK8IP3Q9UPT6 1336 aa20.97■□□□□ 0.95
TRIO-221ENST00000513206 TRIM44Q96DX7 344 aaPredicted RBP20.94■□□□□ 0.94
TRIO-221ENST00000513206 SENP3-EIF4A1A0A087X0R7 540 aa20.94■□□□□ 0.94
TRIO-221ENST00000513206 NEUROD2Q15784 382 aa20.94■□□□□ 0.94
TRIO-221ENST00000513206 NAP1L5Q96NT1 182 aaPredicted RBP20.93■□□□□ 0.94
TRIO-221ENST00000513206 NUDCQ9Y266 331 aa20.92■□□□□ 0.94
TRIO-221ENST00000513206 FHAD1B1AJZ9 1412 aa20.91■□□□□ 0.94
TRIO-221ENST00000513206 ZRSR1Q15695 479 aaKnown RBP20.9■□□□□ 0.94
TRIO-221ENST00000513206 CCNB3Q8WWL7 1395 aa20.9■□□□□ 0.94
TRIO-221ENST00000513206 HDGFP51858 240 aaKnown RBP20.9■□□□□ 0.94
TRIO-221ENST00000513206 GOLGA2Q08379 1002 aa20.89■□□□□ 0.94
TRIO-221ENST00000513206 DDRGK1Q96HY6 314 aa20.88■□□□□ 0.93
TRIO-221ENST00000513206 PNNQ9H307 717 aaKnown RBP20.87■□□□□ 0.93
TRIO-221ENST00000513206 U2SURPO15042 1029 aaKnown RBP20.85■□□□□ 0.93
TRIO-221ENST00000513206 GOLGA6L22H0YM25 854 aa20.85■□□□□ 0.93
TRIO-221ENST00000513206 TAOK2Q9UL54 1235 aa20.85■□□□□ 0.93
TRIO-221ENST00000513206 TPRNQ4KMQ1 711 aa20.85■□□□□ 0.93
TRIO-221ENST00000513206 OS9Q13438 667 aaPredicted RBP20.84■□□□□ 0.93
TRIO-221ENST00000513206 SOX12O15370 315 aa20.84■□□□□ 0.93
TRIO-221ENST00000513206 CC2D1BQ5T0F9 858 aaKnown RBP20.84■□□□□ 0.93
TRIO-221ENST00000513206 NOP58Q9Y2X3 529 aaKnown RBP20.84■□□□□ 0.93
TRIO-221ENST00000513206 CUX2O14529 1486 aa20.83■□□□□ 0.93
TRIO-221ENST00000513206 MYO15BQ96JP2 1530 aa20.83■□□□□ 0.92
TRIO-221ENST00000513206 PRDM2Q13029 1718 aa20.82■□□□□ 0.92
TRIO-221ENST00000513206 SRPK2P78362 688 aaKnown RBP20.82■□□□□ 0.92
TRIO-221ENST00000513206 SMARCA2P51531 1590 aa20.82■□□□□ 0.92
TRIO-221ENST00000513206 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.81■□□□□ 0.92
TRIO-221ENST00000513206 WIZO95785 1651 aa20.81■□□□□ 0.92
TRIO-221ENST00000513206 SUPT16HQ9Y5B9 1047 aaKnown RBP20.81■□□□□ 0.92
TRIO-221ENST00000513206 DCAF11Q8TEB1 546 aa20.79■□□□□ 0.92
TRIO-221ENST00000513206 FRAT1Q92837 279 aaPredicted RBP20.77■□□□□ 0.91
TRIO-221ENST00000513206 FGD1P98174 961 aa20.76■□□□□ 0.91
TRIO-221ENST00000513206 SAFB2Q14151 953 aaKnown RBP eCLIP20.76■□□□□ 0.91
TRIO-221ENST00000513206 ABCC8Q09428 1581 aa20.75■□□□□ 0.91
TRIO-221ENST00000513206 TMF1P82094 1093 aa20.74■□□□□ 0.91
TRIO-221ENST00000513206 TNIKQ9UKE5 1360 aa20.74■□□□□ 0.91
TRIO-221ENST00000513206 CARMIL1Q5VZK9 1371 aa20.74■□□□□ 0.91
TRIO-221ENST00000513206 KCNJ4P48050 445 aa20.73■□□□□ 0.91
TRIO-221ENST00000513206 NAP1L2Q9ULW6 460 aaPredicted RBP20.73■□□□□ 0.91
TRIO-221ENST00000513206 CHMP4BQ9H444 224 aaKnown RBP20.72■□□□□ 0.91
TRIO-221ENST00000513206 GGT6Q6P531 493 aa20.72■□□□□ 0.91
TRIO-221ENST00000513206 ARHGAP35Q9NRY4 1499 aa20.71■□□□□ 0.91
TRIO-221ENST00000513206 STK26Q9P289 416 aa20.71■□□□□ 0.91
TRIO-221ENST00000513206 CARMIL2Q6F5E8 1435 aa20.71■□□□□ 0.91
TRIO-221ENST00000513206 PAK3O75914 559 aaPredicted RBP20.71■□□□□ 0.91
TRIO-221ENST00000513206 RBM19Q9Y4C8 960 aaKnown RBP20.67■□□□□ 0.9
TRIO-221ENST00000513206 RTF1Q92541 710 aaKnown RBP20.67■□□□□ 0.9
TRIO-221ENST00000513206 PDS5BQ9NTI5 1447 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms