RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 NUBP1P53384 320 aa10□□□□□ -0.81
HTT-210ENST00000512909 PLCB2Q00722 1185 aa9.99□□□□□ -0.81
HTT-210ENST00000512909 HAP1P54257 671 aaPredicted RBP9.98□□□□□ -0.81
HTT-210ENST00000512909 CHADLQ6NUI6 762 aa9.98□□□□□ -0.81
HTT-210ENST00000512909 PAK3O75914 559 aaPredicted RBP9.97□□□□□ -0.81
HTT-210ENST00000512909 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
HTT-210ENST00000512909 CHGAP10645 457 aaKnown RBP9.96□□□□□ -0.82
HTT-210ENST00000512909 PRKAR2AP13861 404 aaKnown RBP9.96□□□□□ -0.82
HTT-210ENST00000512909 FARP1Q9Y4F1 1045 aaPredicted RBP9.93□□□□□ -0.82
HTT-210ENST00000512909 MNX1P50219 401 aaPredicted RBP9.92□□□□□ -0.82
HTT-210ENST00000512909 RASEFQ8IZ41 740 aa9.92□□□□□ -0.82
HTT-210ENST00000512909 CFAP44Q96MT7 982 aa9.92□□□□□ -0.82
HTT-210ENST00000512909 TSPYL2Q9H2G4 693 aaPredicted RBP9.92□□□□□ -0.82
HTT-210ENST00000512909 RIOK3O14730 519 aaKnown RBP9.91□□□□□ -0.82
HTT-210ENST00000512909 PAXIP1Q6ZW49 1069 aaPredicted RBP9.9□□□□□ -0.82
HTT-210ENST00000512909 PYGBP11216 843 aa9.88□□□□□ -0.83
HTT-210ENST00000512909 SPRYD3Q8NCJ5 442 aa9.87□□□□□ -0.83
HTT-210ENST00000512909 VGFO15240 615 aaPredicted RBP9.86□□□□□ -0.83
HTT-210ENST00000512909 CHRM1P11229 460 aaPredicted RBP9.85□□□□□ -0.83
HTT-210ENST00000512909 STK25O00506 426 aa9.84□□□□□ -0.83
HTT-210ENST00000512909 HS6ST3Q8IZP7 471 aa9.82□□□□□ -0.84
HTT-210ENST00000512909 ZNF467Q7Z7K2 595 aaPredicted RBP9.81□□□□□ -0.84
HTT-210ENST00000512909 EVX2Q03828 476 aa9.8□□□□□ -0.84
HTT-210ENST00000512909 STK24Q9Y6E0 443 aa9.79□□□□□ -0.84
HTT-210ENST00000512909 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
HTT-210ENST00000512909 RYDENQ9NUL5 291 aaKnown RBP9.75□□□□□ -0.85
HTT-210ENST00000512909 VSIG10Q8N0Z9 540 aa9.74□□□□□ -0.85
HTT-210ENST00000512909 BCL11BQ9C0K0 894 aaPredicted RBP9.74□□□□□ -0.85
HTT-210ENST00000512909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.73□□□□□ -0.85
HTT-210ENST00000512909 ZFP91Q96JP5 570 aaPredicted RBP9.73□□□□□ -0.85
HTT-210ENST00000512909 ZRANB1Q9UGI0 708 aa9.72□□□□□ -0.85
HTT-210ENST00000512909 CD44P16070 742 aaKnown RBP9.71□□□□□ -0.86
HTT-210ENST00000512909 PDAP1Q13442 181 aaKnown RBP9.71□□□□□ -0.86
HTT-210ENST00000512909 PCDHB13Q9Y5F0 798 aa9.71□□□□□ -0.86
HTT-210ENST00000512909 SGIP1Q9BQI5 828 aa9.7□□□□□ -0.86
HTT-210ENST00000512909 C19orf67A6NJJ6 358 aa9.69□□□□□ -0.86
HTT-210ENST00000512909 CCDC61Q9Y6R9 512 aa9.69□□□□□ -0.86
HTT-210ENST00000512909 ZNF579Q8NAF0 562 aaKnown RBP9.68□□□□□ -0.86
HTT-210ENST00000512909 PCDHB8Q9UN66 801 aa9.67□□□□□ -0.86
HTT-210ENST00000512909 PSEN1P49768 467 aa9.65□□□□□ -0.86
HTT-210ENST00000512909 DNAJC5Q9H3Z4 198 aa9.64□□□□□ -0.87
HTT-210ENST00000512909 GOLGA2Q08379 1002 aa9.63□□□□□ -0.87
HTT-210ENST00000512909 MAP3K13O43283 966 aa9.62□□□□□ -0.87
HTT-210ENST00000512909 TSHZ2Q9NRE2 1034 aa9.62□□□□□ -0.87
HTT-210ENST00000512909 GABBR2O75899 941 aa9.61□□□□□ -0.87
HTT-210ENST00000512909 KIF12Q96FN5 646 aa9.6□□□□□ -0.87
HTT-210ENST00000512909 BCANQ96GW7 911 aa9.59□□□□□ -0.87
HTT-210ENST00000512909 IFNL1Q8IU54 200 aa9.58□□□□□ -0.88
HTT-210ENST00000512909 PHF12Q96QT6 1004 aa9.57□□□□□ -0.88
HTT-210ENST00000512909 GTPBP6O43824 516 aaPredicted RBP9.56□□□□□ -0.88
HTT-210ENST00000512909 NKX1-1Q15270 411 aaPredicted RBP9.56□□□□□ -0.88
HTT-210ENST00000512909 CABP2Q9NPB3 220 aa9.55□□□□□ -0.88
HTT-210ENST00000512909 LHX8Q68G74 356 aa9.53□□□□□ -0.88
HTT-210ENST00000512909 NLRP6P59044 892 aa9.51□□□□□ -0.89
HTT-210ENST00000512909 SOX12O15370 315 aa9.5□□□□□ -0.89
HTT-210ENST00000512909 MKRN3Q13064 507 aaKnown RBP9.5□□□□□ -0.89
HTT-210ENST00000512909 TMEM106CQ9BVX2 250 aa9.5□□□□□ -0.89
HTT-210ENST00000512909 WDR70Q9NW82 654 aa9.5□□□□□ -0.89
HTT-210ENST00000512909 KDM2AQ9Y2K7 1162 aa9.49□□□□□ -0.89
HTT-210ENST00000512909 NBR1Q14596 966 aa9.48□□□□□ -0.89
HTT-210ENST00000512909 EFCAB3Q8N7B9 438 aa9.48□□□□□ -0.89
HTT-210ENST00000512909 CLCN6P51797 869 aa9.46□□□□□ -0.9
HTT-210ENST00000512909 MS4A3Q96HJ5 214 aa9.46□□□□□ -0.9
HTT-210ENST00000512909 TIE1P35590 1138 aa9.41□□□□□ -0.9
HTT-210ENST00000512909 MFRPQ9BY79 579 aa9.41□□□□□ -0.9
HTT-210ENST00000512909 PHF8Q9UPP1 1060 aa9.41□□□□□ -0.9
HTT-210ENST00000512909 P3H3Q8IVL6 736 aa9.38□□□□□ -0.91
HTT-210ENST00000512909 G3V3G9 751 aa9.37□□□□□ -0.91
HTT-210ENST00000512909 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
HTT-210ENST00000512909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.91
HTT-210ENST00000512909 TTLL13PA6NNM8 815 aa9.34□□□□□ -0.91
HTT-210ENST00000512909 DCBLD2Q96PD2 775 aa9.34□□□□□ -0.91
HTT-210ENST00000512909 GALR2O43603 387 aaPredicted RBP9.33□□□□□ -0.92
HTT-210ENST00000512909 FBXO22Q8NEZ5 403 aa9.32□□□□□ -0.92
HTT-210ENST00000512909 TRIM35Q9UPQ4 493 aa9.32□□□□□ -0.92
HTT-210ENST00000512909 TRPC6Q9Y210 931 aa9.32□□□□□ -0.92
HTT-210ENST00000512909 BMP2KQ9NSY1 1161 aaPredicted RBP9.31□□□□□ -0.92
HTT-210ENST00000512909 PPP1R37O75864 691 aa9.29□□□□□ -0.92
HTT-210ENST00000512909 PDE4AP27815 886 aa9.29□□□□□ -0.92
HTT-210ENST00000512909 TULP1O00294 542 aaPredicted RBP9.28□□□□□ -0.92
HTT-210ENST00000512909 PLCG2P16885 1265 aa9.25□□□□□ -0.93
HTT-210ENST00000512909 CADPS2Q86UW7 1296 aa9.25□□□□□ -0.93
HTT-210ENST00000512909 SEC24BO95487 1268 aa9.24□□□□□ -0.93
HTT-210ENST00000512909 LARP6Q9BRS8 491 aaKnown RBP9.24□□□□□ -0.93
HTT-210ENST00000512909 ATN1P54259 1190 aaPredicted RBP9.22□□□□□ -0.93
HTT-210ENST00000512909 E2F4Q16254 413 aa9.22□□□□□ -0.93
HTT-210ENST00000512909 IER5LQ5T953 404 aa9.22□□□□□ -0.93
HTT-210ENST00000512909 MS4A4AQ96JQ5 239 aa9.22□□□□□ -0.93
HTT-210ENST00000512909 TPRNQ4KMQ1 711 aa9.21□□□□□ -0.94
HTT-210ENST00000512909 OCEL1Q9H607 264 aa9.21□□□□□ -0.94
HTT-210ENST00000512909 ATMINO43313 823 aaPredicted RBP9.2□□□□□ -0.94
HTT-210ENST00000512909 TMC2Q8TDI7 906 aa9.2□□□□□ -0.94
HTT-210ENST00000512909 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
HTT-210ENST00000512909 L3MBTL3Q96JM7 780 aaPredicted RBP9.19□□□□□ -0.94
HTT-210ENST00000512909 ASTLQ6HA08 431 aaPredicted RBP9.18□□□□□ -0.94
HTT-210ENST00000512909 KCNV2Q8TDN2 545 aa9.16□□□□□ -0.94
HTT-210ENST00000512909 SLC39A7Q92504 469 aa9.15□□□□□ -0.94
HTT-210ENST00000512909 ARHGEF1Q92888 912 aaKnown RBP9.15□□□□□ -0.94
HTT-210ENST00000512909 PLSCR2Q9NRY7 297 aa9.15□□□□□ -0.94
HTT-210ENST00000512909 BOLA1Q9Y3E2 137 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms