RNA–Protein interactions for RNA: ENST00000512797.5

RPS3A-211, Transcript of ribosomal protein S3A, humanhuman

TSL 2

Gene RPS3A, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-211ENST00000512797 POTEIP0CG38 1075 aa14.53□□□□□ -0.08
RPS3A-211ENST00000512797 CCDC61Q9Y6R9 512 aa14.52□□□□□ -0.09
RPS3A-211ENST00000512797 KLHL34Q8N239 644 aa14.45□□□□□ -0.1
RPS3A-211ENST00000512797 DCBLD2Q96PD2 775 aa14.44□□□□□ -0.1
RPS3A-211ENST00000512797 KIF12Q96FN5 646 aa14.43□□□□□ -0.1
RPS3A-211ENST00000512797 MS4A3Q96HJ5 214 aa14.42□□□□□ -0.1
RPS3A-211ENST00000512797 IFNLR1Q8IU57 520 aaPredicted RBP14.39□□□□□ -0.11
RPS3A-211ENST00000512797 MAP3K13O43283 966 aa14.37□□□□□ -0.11
RPS3A-211ENST00000512797 FAM212AQ96EL1 285 aa14.37□□□□□ -0.11
RPS3A-211ENST00000512797 DCAF8Q5TAQ9 597 aa14.36□□□□□ -0.11
RPS3A-211ENST00000512797 TRPC6Q9Y210 931 aa14.28□□□□□ -0.12
RPS3A-211ENST00000512797 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
RPS3A-211ENST00000512797 ATMINO43313 823 aaPredicted RBP14.24□□□□□ -0.13
RPS3A-211ENST00000512797 PYGBP11216 843 aa14.24□□□□□ -0.13
RPS3A-211ENST00000512797 SPOCK2Q92563 424 aa14.24□□□□□ -0.13
RPS3A-211ENST00000512797 PCDHB13Q9Y5F0 798 aa14.24□□□□□ -0.13
RPS3A-211ENST00000512797 ASTLQ6HA08 431 aaPredicted RBP14.23□□□□□ -0.13
RPS3A-211ENST00000512797 LHX8Q68G74 356 aa14.22□□□□□ -0.13
RPS3A-211ENST00000512797 SGIP1Q9BQI5 828 aa14.21□□□□□ -0.13
RPS3A-211ENST00000512797 GSE1Q14687 1217 aa14.2□□□□□ -0.14
RPS3A-211ENST00000512797 IFNL1Q8IU54 200 aa14.2□□□□□ -0.14
RPS3A-211ENST00000512797 BMP2KQ9NSY1 1161 aaPredicted RBP14.18□□□□□ -0.14
RPS3A-211ENST00000512797 ATN1P54259 1190 aaPredicted RBP14.17□□□□□ -0.14
RPS3A-211ENST00000512797 TIE1P35590 1138 aa14.14□□□□□ -0.15
RPS3A-211ENST00000512797 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
RPS3A-211ENST00000512797 PCDHB8Q9UN66 801 aa14.11□□□□□ -0.15
RPS3A-211ENST00000512797 TTLL13PA6NNM8 815 aa14.1□□□□□ -0.15
RPS3A-211ENST00000512797 CHRM1P11229 460 aaPredicted RBP14.08□□□□□ -0.16
RPS3A-211ENST00000512797 POTEB2H3BUK9 544 aa14.07□□□□□ -0.16
RPS3A-211ENST00000512797 C7P10643 843 aa14.07□□□□□ -0.16
RPS3A-211ENST00000512797 SLC39A7Q92504 469 aa14.07□□□□□ -0.16
RPS3A-211ENST00000512797 METRNQ9UJH8 293 aa14.07□□□□□ -0.16
RPS3A-211ENST00000512797 TMEM106CQ9BVX2 250 aa14.04□□□□□ -0.16
RPS3A-211ENST00000512797 TRIM35Q9UPQ4 493 aa14.01□□□□□ -0.17
RPS3A-211ENST00000512797 POTEFA5A3E0 1075 aa13.98□□□□□ -0.17
RPS3A-211ENST00000512797 ZNF467Q7Z7K2 595 aaPredicted RBP13.97□□□□□ -0.17
RPS3A-211ENST00000512797 POTEJP0CG39 1038 aa13.94□□□□□ -0.18
RPS3A-211ENST00000512797 COLQQ9Y215 455 aaPredicted RBP13.93□□□□□ -0.18
RPS3A-211ENST00000512797 OTUD5Q96G74 571 aa13.91□□□□□ -0.18
RPS3A-211ENST00000512797 SEC24BO95487 1268 aa13.89□□□□□ -0.19
RPS3A-211ENST00000512797 PSEN1P49768 467 aa13.89□□□□□ -0.19
RPS3A-211ENST00000512797 IER5LQ5T953 404 aa13.89□□□□□ -0.19
RPS3A-211ENST00000512797 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
RPS3A-211ENST00000512797 PDAP1Q13442 181 aaKnown RBP13.83□□□□□ -0.2
RPS3A-211ENST00000512797 IRX5P78411 483 aaPredicted RBP13.81□□□□□ -0.2
RPS3A-211ENST00000512797 RNF25Q96BH1 459 aaPredicted RBP13.77□□□□□ -0.21
RPS3A-211ENST00000512797 PLCG2P16885 1265 aa13.76□□□□□ -0.21
RPS3A-211ENST00000512797 MAMSTRQ6ZN01 415 aa13.75□□□□□ -0.21
RPS3A-211ENST00000512797 OCEL1Q9H607 264 aa13.75□□□□□ -0.21
RPS3A-211ENST00000512797 GOLGA2Q08379 1002 aa13.74□□□□□ -0.21
RPS3A-211ENST00000512797 RIOK3O14730 519 aaKnown RBP13.73□□□□□ -0.21
RPS3A-211ENST00000512797 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
RPS3A-211ENST00000512797 PKD2Q13563 968 aa13.72□□□□□ -0.21
RPS3A-211ENST00000512797 CABP2Q9NPB3 220 aa13.72□□□□□ -0.21
RPS3A-211ENST00000512797 SCUBE2Q9NQ36 999 aa13.7□□□□□ -0.22
RPS3A-211ENST00000512797 ECM2O94769 699 aaPredicted RBP13.68□□□□□ -0.22
RPS3A-211ENST00000512797 PDCD7Q8N8D1 485 aaKnown RBP13.66□□□□□ -0.22
RPS3A-211ENST00000512797 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.66□□□□□ -0.226e-12■□□□□ 9.5
RPS3A-211ENST00000512797 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.65□□□□□ -0.22
RPS3A-211ENST00000512797 ZFP91Q96JP5 570 aaPredicted RBP13.65□□□□□ -0.22
RPS3A-211ENST00000512797 VGFO15240 615 aaPredicted RBP13.63□□□□□ -0.23
RPS3A-211ENST00000512797 EFCAB3Q8N7B9 438 aa13.62□□□□□ -0.23
RPS3A-211ENST00000512797 DPY19L2Q6NUT2 758 aa13.6□□□□□ -0.23
RPS3A-211ENST00000512797 ILDR1Q86SU0 546 aaPredicted RBP13.6□□□□□ -0.23
RPS3A-211ENST00000512797 RGL2O15211 777 aa13.59□□□□□ -0.23
RPS3A-211ENST00000512797 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
RPS3A-211ENST00000512797 L3MBTL3Q96JM7 780 aaPredicted RBP13.53□□□□□ -0.24
RPS3A-211ENST00000512797 BCL11BQ9C0K0 894 aaPredicted RBP13.51□□□□□ -0.25
RPS3A-211ENST00000512797 TAOK2Q9UL54 1235 aa13.51□□□□□ -0.25
RPS3A-211ENST00000512797 FAM163AQ96GL9 167 aaPredicted RBP13.48□□□□□ -0.25
RPS3A-211ENST00000512797 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.48□□□□□ -0.25
RPS3A-211ENST00000512797 STK24Q9Y6E0 443 aa13.48□□□□□ -0.25
RPS3A-211ENST00000512797 SOX12O15370 315 aa13.47□□□□□ -0.25
RPS3A-211ENST00000512797 STK25O00506 426 aa13.46□□□□□ -0.25
RPS3A-211ENST00000512797 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
RPS3A-211ENST00000512797 BOLA1Q9Y3E2 137 aa13.43□□□□□ -0.26
RPS3A-211ENST00000512797 LCE2DQ5TA82 110 aaPredicted RBP13.42□□□□□ -0.26
RPS3A-211ENST00000512797 C3orf67Q6ZVT6 689 aa13.42□□□□□ -0.26
RPS3A-211ENST00000512797 MS4A4AQ96JQ5 239 aa13.42□□□□□ -0.26
RPS3A-211ENST00000512797 G3V3G9 751 aa13.37□□□□□ -0.27
RPS3A-211ENST00000512797 TMEM121BQ9BXQ6 578 aaPredicted RBP13.36□□□□□ -0.27
RPS3A-211ENST00000512797 NLRP6P59044 892 aa13.35□□□□□ -0.27
RPS3A-211ENST00000512797 FBXO22Q8NEZ5 403 aa13.35□□□□□ -0.27
RPS3A-211ENST00000512797 MFRPQ9BY79 579 aa13.35□□□□□ -0.27
RPS3A-211ENST00000512797 POTEMA6NI47 508 aa13.34□□□□□ -0.27
RPS3A-211ENST00000512797 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
RPS3A-211ENST00000512797 MICALL2Q8IY33 904 aa13.31□□□□□ -0.28
RPS3A-211ENST00000512797 ST18O60284 1047 aa13.3□□□□□ -0.28
RPS3A-211ENST00000512797 SNPHO15079 494 aa13.26□□□□□ -0.29
RPS3A-211ENST00000512797 CHGAP10645 457 aaKnown RBP13.26□□□□□ -0.29
RPS3A-211ENST00000512797 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
RPS3A-211ENST00000512797 TMEM92Q6UXU6 159 aa13.24□□□□□ -0.29
RPS3A-211ENST00000512797 PPP1R37O75864 691 aa13.18□□□□□ -0.3
RPS3A-211ENST00000512797 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
RPS3A-211ENST00000512797 NKX1-1Q15270 411 aaPredicted RBP13.14□□□□□ -0.31
RPS3A-211ENST00000512797 MARVELD3Q96A59 401 aa13.13□□□□□ -0.31
RPS3A-211ENST00000512797 DCAF8L2P0C7V8 631 aa13.11□□□□□ -0.31
RPS3A-211ENST00000512797 DNAJC5Q9H3Z4 198 aa13.11□□□□□ -0.31
RPS3A-211ENST00000512797 PCDH10Q9P2E7 1040 aa13.06□□□□□ -0.32
RPS3A-211ENST00000512797 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms