RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
SNF8-211ENST00000512243 FBXO3Q9UK99 471 aa17.37■□□□□ 0.37
SNF8-211ENST00000512243 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
SNF8-211ENST00000512243 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
SNF8-211ENST00000512243 SMARCA4P51532 1647 aa17.3■□□□□ 0.36
SNF8-211ENST00000512243 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
SNF8-211ENST00000512243 GABBR2O75899 941 aa17.28■□□□□ 0.36
SNF8-211ENST00000512243 PAK3O75914 559 aaPredicted RBP17.26■□□□□ 0.35
SNF8-211ENST00000512243 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
SNF8-211ENST00000512243 ZNF579Q8NAF0 562 aaKnown RBP17.23■□□□□ 0.35
SNF8-211ENST00000512243 VASPP50552 380 aaPredicted RBP17.22■□□□□ 0.35
SNF8-211ENST00000512243 TSPYL2Q9H2G4 693 aaPredicted RBP17.2■□□□□ 0.34
SNF8-211ENST00000512243 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
SNF8-211ENST00000512243 PHF12Q96QT6 1004 aa17.18■□□□□ 0.34
SNF8-211ENST00000512243 ZBTB47Q9UFB7 747 aaPredicted RBP17.17■□□□□ 0.34
SNF8-211ENST00000512243 RASEFQ8IZ41 740 aa17.15■□□□□ 0.34
SNF8-211ENST00000512243 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
SNF8-211ENST00000512243 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
SNF8-211ENST00000512243 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
SNF8-211ENST00000512243 NUBP1P53384 320 aa17.07■□□□□ 0.32
SNF8-211ENST00000512243 WIZO95785 1651 aa17.07■□□□□ 0.32
SNF8-211ENST00000512243 RSF1Q96T23 1441 aaPredicted RBP17.06■□□□□ 0.32
SNF8-211ENST00000512243 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
SNF8-211ENST00000512243 GALR2O43603 387 aaPredicted RBP17.04■□□□□ 0.32
SNF8-211ENST00000512243 CCDC61Q9Y6R9 512 aa17.04■□□□□ 0.32
SNF8-211ENST00000512243 CLCN6P51797 869 aa17.03■□□□□ 0.32
SNF8-211ENST00000512243 HMGXB3Q12766 1538 aa17.02■□□□□ 0.32
SNF8-211ENST00000512243 NCAPD3P42695 1498 aa17■□□□□ 0.31
SNF8-211ENST00000512243 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
SNF8-211ENST00000512243 IFNLR1Q8IU57 520 aaPredicted RBP16.95■□□□□ 0.3
SNF8-211ENST00000512243 FAM212AQ96EL1 285 aa16.95■□□□□ 0.3
SNF8-211ENST00000512243 MS4A3Q96HJ5 214 aa16.94■□□□□ 0.3
SNF8-211ENST00000512243 POTEIP0CG38 1075 aa16.93■□□□□ 0.3
SNF8-211ENST00000512243 DCBLD2Q96PD2 775 aa16.92■□□□□ 0.3
SNF8-211ENST00000512243 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
SNF8-211ENST00000512243 KIF12Q96FN5 646 aa16.9■□□□□ 0.3
SNF8-211ENST00000512243 DCAF8Q5TAQ9 597 aa16.88■□□□□ 0.29
SNF8-211ENST00000512243 MAP3K13O43283 966 aa16.86■□□□□ 0.29
SNF8-211ENST00000512243 SUPT5HO00267 1087 aaKnown RBP16.83■□□□□ 0.28
SNF8-211ENST00000512243 SPOCK2Q92563 424 aa16.8■□□□□ 0.28
SNF8-211ENST00000512243 PYGBP11216 843 aa16.76■□□□□ 0.27
SNF8-211ENST00000512243 TRPC6Q9Y210 931 aa16.75■□□□□ 0.27
SNF8-211ENST00000512243 PCDHB13Q9Y5F0 798 aa16.75■□□□□ 0.27
SNF8-211ENST00000512243 GSE1Q14687 1217 aa16.72■□□□□ 0.27
SNF8-211ENST00000512243 CIZ1Q9ULV3 898 aaPredicted RBP16.68■□□□□ 0.26
SNF8-211ENST00000512243 IFNL1Q8IU54 200 aa16.67■□□□□ 0.26
SNF8-211ENST00000512243 ATMINO43313 823 aaPredicted RBP16.66■□□□□ 0.26
SNF8-211ENST00000512243 PELP1Q8IZL8 1130 aaKnown RBP16.66■□□□□ 0.26
SNF8-211ENST00000512243 SGIP1Q9BQI5 828 aa16.66■□□□□ 0.26
SNF8-211ENST00000512243 ASTLQ6HA08 431 aaPredicted RBP16.65■□□□□ 0.26
SNF8-211ENST00000512243 CCDC88BA6NC98 1476 aa16.65■□□□□ 0.26
SNF8-211ENST00000512243 BMP2KQ9NSY1 1161 aaPredicted RBP16.64■□□□□ 0.25
SNF8-211ENST00000512243 ATN1P54259 1190 aaPredicted RBP16.61■□□□□ 0.25
SNF8-211ENST00000512243 TIE1P35590 1138 aa16.59■□□□□ 0.25
SNF8-211ENST00000512243 LAMC3Q9Y6N6 1575 aa16.59■□□□□ 0.25
SNF8-211ENST00000512243 PCDHB8Q9UN66 801 aa16.58■□□□□ 0.24
SNF8-211ENST00000512243 PRDM2Q13029 1718 aa16.56■□□□□ 0.24
SNF8-211ENST00000512243 LHX8Q68G74 356 aa16.56■□□□□ 0.24
SNF8-211ENST00000512243 TTLL13PA6NNM8 815 aa16.55■□□□□ 0.24
SNF8-211ENST00000512243 NESP48681 1621 aa16.53■□□□□ 0.24
SNF8-211ENST00000512243 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.24
SNF8-211ENST00000512243 CFTRP13569 1480 aa16.5■□□□□ 0.23
SNF8-211ENST00000512243 CHRM1P11229 460 aaPredicted RBP16.5■□□□□ 0.23
SNF8-211ENST00000512243 TMEM106CQ9BVX2 250 aa16.5■□□□□ 0.23
SNF8-211ENST00000512243 METRNQ9UJH8 293 aa16.5■□□□□ 0.23
SNF8-211ENST00000512243 SLC39A7Q92504 469 aa16.48■□□□□ 0.23
SNF8-211ENST00000512243 ZNF467Q7Z7K2 595 aaPredicted RBP16.46■□□□□ 0.23
SNF8-211ENST00000512243 TRIM35Q9UPQ4 493 aa16.46■□□□□ 0.23
SNF8-211ENST00000512243 KIF21AQ7Z4S6 1674 aa16.44■□□□□ 0.22
SNF8-211ENST00000512243 C7P10643 843 aa16.44■□□□□ 0.22
SNF8-211ENST00000512243 PDS5BQ9NTI5 1447 aa16.42■□□□□ 0.22
SNF8-211ENST00000512243 ERCC6Q03468 1493 aa16.41■□□□□ 0.22
SNF8-211ENST00000512243 POTEB2H3BUK9 544 aa16.4■□□□□ 0.22
SNF8-211ENST00000512243 FANCD2Q9BXW9 1451 aa16.37■□□□□ 0.21
SNF8-211ENST00000512243 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
SNF8-211ENST00000512243 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
SNF8-211ENST00000512243 POTEFA5A3E0 1075 aa16.33■□□□□ 0.2
SNF8-211ENST00000512243 PSEN1P49768 467 aa16.33■□□□□ 0.2
SNF8-211ENST00000512243 COLQQ9Y215 455 aaPredicted RBP16.31■□□□□ 0.2
SNF8-211ENST00000512243 SEC24BO95487 1268 aa16.3■□□□□ 0.2
SNF8-211ENST00000512243 PDAP1Q13442 181 aaKnown RBP16.3■□□□□ 0.2
SNF8-211ENST00000512243 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
SNF8-211ENST00000512243 IER5LQ5T953 404 aa16.28■□□□□ 0.2
SNF8-211ENST00000512243 RNF25Q96BH1 459 aaPredicted RBP16.26■□□□□ 0.19
SNF8-211ENST00000512243 MRC2Q9UBG0 1479 aa16.26■□□□□ 0.19
SNF8-211ENST00000512243 POTEJP0CG39 1038 aa16.24■□□□□ 0.19
SNF8-211ENST00000512243 OTUD5Q96G74 571 aa16.22■□□□□ 0.19
SNF8-211ENST00000512243 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
SNF8-211ENST00000512243 WDR62O43379 1518 aa16.2■□□□□ 0.18
SNF8-211ENST00000512243 RIOK3O14730 519 aaKnown RBP16.19■□□□□ 0.18
SNF8-211ENST00000512243 ECM2O94769 699 aaPredicted RBP16.19■□□□□ 0.18
SNF8-211ENST00000512243 PLCG2P16885 1265 aa16.19■□□□□ 0.18
SNF8-211ENST00000512243 PKD2Q13563 968 aa16.19■□□□□ 0.18
SNF8-211ENST00000512243 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
SNF8-211ENST00000512243 DNMBPQ6XZF7 1577 aa16.18■□□□□ 0.18
SNF8-211ENST00000512243 IRX5P78411 483 aaPredicted RBP16.18■□□□□ 0.18
SNF8-211ENST00000512243 CABP2Q9NPB3 220 aa16.17■□□□□ 0.18
SNF8-211ENST00000512243 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
SNF8-211ENST00000512243 TOPBP1Q92547 1522 aa16.15■□□□□ 0.18
SNF8-211ENST00000512243 MKRN3Q13064 507 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms