RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 LHX8Q68G74 356 aa10.86□□□□□ -0.67
TOPBP1-208ENST00000511439 RASEFQ8IZ41 740 aa10.84□□□□□ -0.67
TOPBP1-208ENST00000511439 MS4A3Q96HJ5 214 aa10.83□□□□□ -0.68
TOPBP1-208ENST00000511439 KIF12Q96FN5 646 aa10.8□□□□□ -0.68
TOPBP1-208ENST00000511439 NUBP1P53384 320 aa10.79□□□□□ -0.68
TOPBP1-208ENST00000511439 FAM212AQ96EL1 285 aa10.79□□□□□ -0.68
TOPBP1-208ENST00000511439 VASPP50552 380 aaPredicted RBP10.76□□□□□ -0.69
TOPBP1-208ENST00000511439 ASTLQ6HA08 431 aaPredicted RBP10.75□□□□□ -0.69
TOPBP1-208ENST00000511439 SGIP1Q9BQI5 828 aa10.75□□□□□ -0.69
TOPBP1-208ENST00000511439 MAP3K13O43283 966 aa10.73□□□□□ -0.69
TOPBP1-208ENST00000511439 ATMINO43313 823 aaPredicted RBP10.71□□□□□ -0.69
TOPBP1-208ENST00000511439 KLHL34Q8N239 644 aa10.71□□□□□ -0.69
TOPBP1-208ENST00000511439 SLC39A7Q92504 469 aa10.7□□□□□ -0.7
TOPBP1-208ENST00000511439 TIE1P35590 1138 aa10.69□□□□□ -0.7
TOPBP1-208ENST00000511439 C7P10643 843 aa10.68□□□□□ -0.7
TOPBP1-208ENST00000511439 DCAF8Q5TAQ9 597 aa10.68□□□□□ -0.7
TOPBP1-208ENST00000511439 PCDHB13Q9Y5F0 798 aa10.68□□□□□ -0.7
TOPBP1-208ENST00000511439 PELP1Q8IZL8 1130 aaKnown RBP10.66□□□□□ -0.7
TOPBP1-208ENST00000511439 METRNQ9UJH8 293 aa10.65□□□□□ -0.7
TOPBP1-208ENST00000511439 ATN1P54259 1190 aaPredicted RBP10.64□□□□□ -0.71
TOPBP1-208ENST00000511439 GSE1Q14687 1217 aa10.64□□□□□ -0.71
TOPBP1-208ENST00000511439 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
TOPBP1-208ENST00000511439 TRPC6Q9Y210 931 aa10.59□□□□□ -0.71
TOPBP1-208ENST00000511439 TTLL13PA6NNM8 815 aa10.58□□□□□ -0.72
TOPBP1-208ENST00000511439 IFNL1Q8IU54 200 aa10.58□□□□□ -0.72
TOPBP1-208ENST00000511439 PYGBP11216 843 aa10.56□□□□□ -0.72
TOPBP1-208ENST00000511439 SPOCK2Q92563 424 aa10.56□□□□□ -0.72
TOPBP1-208ENST00000511439 POTEB2H3BUK9 544 aa10.54□□□□□ -0.72
TOPBP1-208ENST00000511439 IER5LQ5T953 404 aa10.54□□□□□ -0.72
TOPBP1-208ENST00000511439 MAMSTRQ6ZN01 415 aa10.54□□□□□ -0.72
TOPBP1-208ENST00000511439 IFNLR1Q8IU57 520 aaPredicted RBP10.54□□□□□ -0.72
TOPBP1-208ENST00000511439 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
TOPBP1-208ENST00000511439 TRIM35Q9UPQ4 493 aa10.52□□□□□ -0.73
TOPBP1-208ENST00000511439 SEC24BO95487 1268 aa10.51□□□□□ -0.73
TOPBP1-208ENST00000511439 ZNF467Q7Z7K2 595 aaPredicted RBP10.51□□□□□ -0.73
TOPBP1-208ENST00000511439 OTUD5Q96G74 571 aa10.51□□□□□ -0.73
TOPBP1-208ENST00000511439 CHRM1P11229 460 aaPredicted RBP10.5□□□□□ -0.73
TOPBP1-208ENST00000511439 SCUBE2Q9NQ36 999 aa10.47□□□□□ -0.73
TOPBP1-208ENST00000511439 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
TOPBP1-208ENST00000511439 PCDHB8Q9UN66 801 aa10.45□□□□□ -0.74
TOPBP1-208ENST00000511439 POTEFA5A3E0 1075 aa10.43□□□□□ -0.74
TOPBP1-208ENST00000511439 TRIM41Q8WV44 630 aa10.42□□□□□ -0.74
TOPBP1-208ENST00000511439 COLQQ9Y215 455 aaPredicted RBP10.41□□□□□ -0.74
TOPBP1-208ENST00000511439 POTEJP0CG39 1038 aa10.4□□□□□ -0.74
TOPBP1-208ENST00000511439 PLCG2P16885 1265 aa10.4□□□□□ -0.74
TOPBP1-208ENST00000511439 GOLGA2Q08379 1002 aa10.38□□□□□ -0.75
TOPBP1-208ENST00000511439 IRX5P78411 483 aaPredicted RBP10.36□□□□□ -0.75
TOPBP1-208ENST00000511439 OCEL1Q9H607 264 aa10.36□□□□□ -0.75
TOPBP1-208ENST00000511439 PSEN1P49768 467 aa10.35□□□□□ -0.75
TOPBP1-208ENST00000511439 PDAP1Q13442 181 aaKnown RBP10.35□□□□□ -0.75
TOPBP1-208ENST00000511439 MKRN3Q13064 507 aaKnown RBP10.33□□□□□ -0.76
TOPBP1-208ENST00000511439 PLSCR2Q9NRY7 297 aa10.33□□□□□ -0.76
TOPBP1-208ENST00000511439 SLAIN1Q8ND83 568 aa10.23□□□□□ -0.77
TOPBP1-208ENST00000511439 L3MBTL3Q96JM7 780 aaPredicted RBP10.23□□□□□ -0.77
TOPBP1-208ENST00000511439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.23□□□□□ -0.772e-6■■■■□ 19.4
TOPBP1-208ENST00000511439 PDCD7Q8N8D1 485 aaKnown RBP10.22□□□□□ -0.77
TOPBP1-208ENST00000511439 CABP2Q9NPB3 220 aa10.22□□□□□ -0.77
TOPBP1-208ENST00000511439 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.21□□□□□ -0.77
TOPBP1-208ENST00000511439 POTEMA6NI47 508 aa10.2□□□□□ -0.78
TOPBP1-208ENST00000511439 RIOK3O14730 519 aaKnown RBP10.19□□□□□ -0.78
TOPBP1-208ENST00000511439 FAM163AQ96GL9 167 aaPredicted RBP10.19□□□□□ -0.78
TOPBP1-208ENST00000511439 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
TOPBP1-208ENST00000511439 ILDR1Q86SU0 546 aaPredicted RBP10.18□□□□□ -0.78
TOPBP1-208ENST00000511439 TAOK2Q9UL54 1235 aa10.18□□□□□ -0.78
TOPBP1-208ENST00000511439 VGFO15240 615 aaPredicted RBP10.17□□□□□ -0.78
TOPBP1-208ENST00000511439 C3orf67Q6ZVT6 689 aa10.17□□□□□ -0.78
TOPBP1-208ENST00000511439 G3V3G9 751 aa10.15□□□□□ -0.78
TOPBP1-208ENST00000511439 SNPHO15079 494 aa10.14□□□□□ -0.79
TOPBP1-208ENST00000511439 PCDH10Q9P2E7 1040 aa10.14□□□□□ -0.79
TOPBP1-208ENST00000511439 RNF25Q96BH1 459 aaPredicted RBP10.12□□□□□ -0.79
TOPBP1-208ENST00000511439 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
TOPBP1-208ENST00000511439 EFCAB3Q8N7B9 438 aa10.1□□□□□ -0.79
TOPBP1-208ENST00000511439 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.09□□□□□ -0.79
TOPBP1-208ENST00000511439 ZFP91Q96JP5 570 aaPredicted RBP10.09□□□□□ -0.79
TOPBP1-208ENST00000511439 SOX12O15370 315 aa10.08□□□□□ -0.8
TOPBP1-208ENST00000511439 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
TOPBP1-208ENST00000511439 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
TOPBP1-208ENST00000511439 DPY19L2Q6NUT2 758 aa10.05□□□□□ -0.8
TOPBP1-208ENST00000511439 TMEM121BQ9BXQ6 578 aaPredicted RBP10.05□□□□□ -0.8
TOPBP1-208ENST00000511439 ST18O60284 1047 aa10.04□□□□□ -0.8
TOPBP1-208ENST00000511439 BCL11BQ9C0K0 894 aaPredicted RBP10□□□□□ -0.81
TOPBP1-208ENST00000511439 PKD2Q13563 968 aa9.99□□□□□ -0.81
TOPBP1-208ENST00000511439 NLRP6P59044 892 aa9.98□□□□□ -0.81
TOPBP1-208ENST00000511439 STK24Q9Y6E0 443 aa9.98□□□□□ -0.81
TOPBP1-208ENST00000511439 STK25O00506 426 aa9.97□□□□□ -0.81
TOPBP1-208ENST00000511439 PHF8Q9UPP1 1060 aa9.96□□□□□ -0.82
TOPBP1-208ENST00000511439 MICALL2Q8IY33 904 aa9.94□□□□□ -0.82
TOPBP1-208ENST00000511439 RGL2O15211 777 aa9.93□□□□□ -0.82
TOPBP1-208ENST00000511439 MS4A4AQ96JQ5 239 aa9.93□□□□□ -0.82
TOPBP1-208ENST00000511439 CDAN1Q8IWY9 1227 aa9.92□□□□□ -0.82
TOPBP1-208ENST00000511439 DOK7Q18PE1 504 aa9.9□□□□□ -0.82
TOPBP1-208ENST00000511439 FBXO22Q8NEZ5 403 aa9.89□□□□□ -0.83
TOPBP1-208ENST00000511439 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
TOPBP1-208ENST00000511439 RIMBP2O15034 1052 aa9.87□□□□□ -0.83
TOPBP1-208ENST00000511439 EMP3P54852 163 aa9.87□□□□□ -0.83
TOPBP1-208ENST00000511439 MARVELD3Q96A59 401 aa9.87□□□□□ -0.83
TOPBP1-208ENST00000511439 MFRPQ9BY79 579 aa9.87□□□□□ -0.83
TOPBP1-208ENST00000511439 HOXB3P14651 431 aaPredicted RBP9.85□□□□□ -0.83
TOPBP1-208ENST00000511439 HOXB1P14653 301 aaPredicted RBP9.81□□□□□ -0.84
TOPBP1-208ENST00000511439 TMEM92Q6UXU6 159 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms