RNA–Protein interactions for RNA: ENST00000510312.6

ARHGEF28-210, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 8,285 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-210ENST00000510312 TSPY10P0CW01 314 aa11.89□□□□□ -0.51
ARHGEF28-210ENST00000510312 DDX10Q13206 875 aaKnown RBP11.89□□□□□ -0.51
ARHGEF28-210ENST00000510312 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.51
ARHGEF28-210ENST00000510312 TMC1Q8TDI8 760 aa11.88□□□□□ -0.51
ARHGEF28-210ENST00000510312 FKBP8Q14318 412 aa11.88□□□□□ -0.51
ARHGEF28-210ENST00000510312 TRIM44Q96DX7 344 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF28-210ENST00000510312 CDK11BP21127 795 aaKnown RBP11.87□□□□□ -0.51
ARHGEF28-210ENST00000510312 NPHP1O15259 732 aa11.87□□□□□ -0.51
ARHGEF28-210ENST00000510312 PPM1GO15355 546 aaPredicted RBP11.85□□□□□ -0.51
ARHGEF28-210ENST00000510312 TAOK2Q9UL54 1235 aa11.85□□□□□ -0.51
ARHGEF28-210ENST00000510312 HIRIP3Q9BW71 556 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF28-210ENST00000510312 CCDC180Q9P1Z9 1646 aa11.84□□□□□ -0.51
ARHGEF28-210ENST00000510312 DDRGK1Q96HY6 314 aa11.83□□□□□ -0.52
ARHGEF28-210ENST00000510312 SENP3-EIF4A1A0A087X0R7 540 aa11.83□□□□□ -0.52
ARHGEF28-210ENST00000510312 RGL3Q3MIN7 710 aa11.83□□□□□ -0.52
ARHGEF28-210ENST00000510312 TPRNQ4KMQ1 711 aa11.83□□□□□ -0.52
ARHGEF28-210ENST00000510312 MYH16Q9H6N6 1097 aa11.82□□□□□ -0.52
ARHGEF28-210ENST00000510312 RRP7BPQ9NSQ0 103 aa11.81□□□□□ -0.52
ARHGEF28-210ENST00000510312 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF28-210ENST00000510312 LAS1LQ9Y4W2 734 aaKnown RBP11.79□□□□□ -0.52
ARHGEF28-210ENST00000510312 IRX6P78412 446 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF28-210ENST00000510312 MTUS2Q5JR59 1369 aa11.77□□□□□ -0.53
ARHGEF28-210ENST00000510312 MLECQ14165 292 aa11.77□□□□□ -0.53
ARHGEF28-210ENST00000510312 NBR1Q14596 966 aa11.75□□□□□ -0.53
ARHGEF28-210ENST00000510312 CCDC136Q96JN2 1154 aa11.75□□□□□ -0.53
ARHGEF28-210ENST00000510312 NCBP3Q53F19 620 aaKnown RBP11.73□□□□□ -0.53
ARHGEF28-210ENST00000510312 MRS2Q9HD23 443 aa11.73□□□□□ -0.53
ARHGEF28-210ENST00000510312 PLEKHD1A6NEE1 506 aa11.72□□□□□ -0.53
ARHGEF28-210ENST00000510312 SOX12O15370 315 aa11.7□□□□□ -0.54
ARHGEF28-210ENST00000510312 BECN1Q14457 450 aa11.7□□□□□ -0.54
ARHGEF28-210ENST00000510312 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
ARHGEF28-210ENST00000510312 POGKQ9P215 609 aa11.69□□□□□ -0.54
ARHGEF28-210ENST00000510312 NEUROD2Q15784 382 aa11.68□□□□□ -0.54
ARHGEF28-210ENST00000510312 CFAP53Q96M91 514 aa11.64□□□□□ -0.55
ARHGEF28-210ENST00000510312 GOLGA2Q08379 1002 aa11.63□□□□□ -0.55
ARHGEF28-210ENST00000510312 NAP1L2Q9ULW6 460 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF28-210ENST00000510312 GOLGA6L22H0YM25 854 aa11.62□□□□□ -0.55
ARHGEF28-210ENST00000510312 OS9Q13438 667 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF28-210ENST00000510312 ISY1Q9ULR0 285 aaKnown RBP11.61□□□□□ -0.55
ARHGEF28-210ENST00000510312 CLSTN1O94985 981 aa11.61□□□□□ -0.55
ARHGEF28-210ENST00000510312 EIF4G2P78344 907 aaKnown RBP eCLIP11.6□□□□□ -0.55
ARHGEF28-210ENST00000510312 FTSJ3Q8IY81 847 aaKnown RBP11.6□□□□□ -0.55
ARHGEF28-210ENST00000510312 NOP58Q9Y2X3 529 aaKnown RBP11.6□□□□□ -0.55
ARHGEF28-210ENST00000510312 L1TD1Q5T7N2 865 aaKnown RBP11.59□□□□□ -0.55
ARHGEF28-210ENST00000510312 CFDP1Q9UEE9 299 aaPredicted RBP11.59□□□□□ -0.55
ARHGEF28-210ENST00000510312 SAFB2Q14151 953 aaKnown RBP eCLIP11.59□□□□□ -0.55
ARHGEF28-210ENST00000510312 CCDC9Q9Y3X0 531 aaKnown RBP11.59□□□□□ -0.55
ARHGEF28-210ENST00000510312 KNSTRNQ9Y448 316 aa11.59□□□□□ -0.55
ARHGEF28-210ENST00000510312 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
ARHGEF28-210ENST00000510312 U2SURPO15042 1029 aaKnown RBP11.59□□□□□ -0.55
ARHGEF28-210ENST00000510312 ZRSR1Q15695 479 aaKnown RBP11.58□□□□□ -0.56
ARHGEF28-210ENST00000510312 CASC1Q6TDU7 716 aa11.58□□□□□ -0.56
ARHGEF28-210ENST00000510312 CC2D1BQ5T0F9 858 aaKnown RBP11.58□□□□□ -0.56
ARHGEF28-210ENST00000510312 CARD11Q9BXL7 1154 aa11.56□□□□□ -0.56
ARHGEF28-210ENST00000510312 PAK3O75914 559 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF28-210ENST00000510312 ZCCHC6Q5VYS8 1495 aaKnown RBP11.55□□□□□ -0.56
ARHGEF28-210ENST00000510312 NAP1L5Q96NT1 182 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF28-210ENST00000510312 STK26Q9P289 416 aa11.54□□□□□ -0.56
ARHGEF28-210ENST00000510312 ZNF330Q9Y3S2 320 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF28-210ENST00000510312 FRAT1Q92837 279 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF28-210ENST00000510312 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF28-210ENST00000510312 EIF4G1Q04637 1599 aaKnown RBP11.53□□□□□ -0.56
ARHGEF28-210ENST00000510312 DEKP35659 375 aaKnown RBP11.53□□□□□ -0.56
ARHGEF28-210ENST00000510312 FGD1P98174 961 aa11.53□□□□□ -0.56
ARHGEF28-210ENST00000510312 RSF1Q96T23 1441 aaPredicted RBP11.53□□□□□ -0.56
ARHGEF28-210ENST00000510312 RSPH6AQ9H0K4 717 aa11.52□□□□□ -0.57
ARHGEF28-210ENST00000510312 NUDCQ9Y266 331 aa11.52□□□□□ -0.57
ARHGEF28-210ENST00000510312 SRPK2P78362 688 aaKnown RBP11.52□□□□□ -0.57
ARHGEF28-210ENST00000510312 KCNJ4P48050 445 aa11.51□□□□□ -0.57
ARHGEF28-210ENST00000510312 CSB-PGBD3P0DP91 1061 aa11.51□□□□□ -0.57
ARHGEF28-210ENST00000510312 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
ARHGEF28-210ENST00000510312 CDCA8Q53HL2 280 aa11.5□□□□□ -0.57
ARHGEF28-210ENST00000510312 PTMAP06454 111 aaKnown RBP11.5□□□□□ -0.57
ARHGEF28-210ENST00000510312 PPP4R2Q9NY27 417 aa11.5□□□□□ -0.57
ARHGEF28-210ENST00000510312 AMER1Q5JTC6 1135 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF28-210ENST00000510312 GGT6Q6P531 493 aa11.49□□□□□ -0.57
ARHGEF28-210ENST00000510312 PTMSP20962 102 aa11.49□□□□□ -0.57
ARHGEF28-210ENST00000510312 USP35Q9P2H5 1018 aa11.49□□□□□ -0.57
ARHGEF28-210ENST00000510312 MIER1Q8N108 512 aa11.48□□□□□ -0.57
ARHGEF28-210ENST00000510312 CLIP1P30622 1438 aa11.48□□□□□ -0.57
ARHGEF28-210ENST00000510312 HDGFP51858 240 aaKnown RBP11.47□□□□□ -0.57
ARHGEF28-210ENST00000510312 SUPT16HQ9Y5B9 1047 aaKnown RBP11.46□□□□□ -0.58
ARHGEF28-210ENST00000510312 RB1CC1Q8TDY2 1594 aa11.46□□□□□ -0.58
ARHGEF28-210ENST00000510312 DNTTIP2Q5QJE6 756 aaKnown RBP11.45□□□□□ -0.58
ARHGEF28-210ENST00000510312 CHAF1AQ13111 956 aaPredicted RBP11.45□□□□□ -0.58
ARHGEF28-210ENST00000510312 AEBP2Q6ZN18 517 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF28-210ENST00000510312 KANK1Q14678 1352 aa11.44□□□□□ -0.58
ARHGEF28-210ENST00000510312 RTF1Q92541 710 aaKnown RBP11.43□□□□□ -0.58
ARHGEF28-210ENST00000510312 RGS3P49796 1198 aa11.43□□□□□ -0.58
ARHGEF28-210ENST00000510312 TMX4Q9H1E5 349 aaPredicted RBP11.43□□□□□ -0.58
ARHGEF28-210ENST00000510312 HSP90AB1P08238 724 aaKnown RBP11.42□□□□□ -0.58
ARHGEF28-210ENST00000510312 DCAF11Q8TEB1 546 aa11.42□□□□□ -0.58
ARHGEF28-210ENST00000510312 G3V3G9 751 aa11.42□□□□□ -0.58
ARHGEF28-210ENST00000510312 DCAF8Q5TAQ9 597 aa11.42□□□□□ -0.58
ARHGEF28-210ENST00000510312 APBB1O00213 710 aa11.42□□□□□ -0.58
ARHGEF28-210ENST00000510312 BAZ1BQ9UIG0 1483 aaKnown RBP11.41□□□□□ -0.58
ARHGEF28-210ENST00000510312 PNNQ9H307 717 aaKnown RBP11.41□□□□□ -0.58
ARHGEF28-210ENST00000510312 SIN3AQ96ST3 1273 aa11.4□□□□□ -0.58
ARHGEF28-210ENST00000510312 NUTM2DQ5VT03 806 aaPredicted RBP11.4□□□□□ -0.58
ARHGEF28-210ENST00000510312 MSNP26038 577 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms