RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, humanhuman

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-208ENST00000509620 ECM2O94769 699 aaPredicted RBP11.28□□□□□ -0.6
OTUD4-208ENST00000509620 FAM212AQ96EL1 285 aa11.26□□□□□ -0.61
OTUD4-208ENST00000509620 GSE1Q14687 1217 aa11.25□□□□□ -0.61
OTUD4-208ENST00000509620 TSPYL2Q9H2G4 693 aaPredicted RBP11.24□□□□□ -0.61
OTUD4-208ENST00000509620 RGL2O15211 777 aa11.21□□□□□ -0.61
OTUD4-208ENST00000509620 DCAF8L2P0C7V8 631 aa11.17□□□□□ -0.62
OTUD4-208ENST00000509620 PYGBP11216 843 aa11.16□□□□□ -0.62
OTUD4-208ENST00000509620 TRIM41Q8WV44 630 aa11.15□□□□□ -0.62
OTUD4-208ENST00000509620 RNF25Q96BH1 459 aaPredicted RBP11.15□□□□□ -0.62
OTUD4-208ENST00000509620 CD44P16070 742 aaKnown RBP11.13□□□□□ -0.63
OTUD4-208ENST00000509620 CCDC61Q9Y6R9 512 aa11.13□□□□□ -0.63
OTUD4-208ENST00000509620 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
OTUD4-208ENST00000509620 CHRM1P11229 460 aaPredicted RBP11.1□□□□□ -0.63
OTUD4-208ENST00000509620 ZRANB1Q9UGI0 708 aa11.1□□□□□ -0.63
OTUD4-208ENST00000509620 PAK3O75914 559 aaPredicted RBP11.08□□□□□ -0.64
OTUD4-208ENST00000509620 PHF12Q96QT6 1004 aa11.06□□□□□ -0.64
OTUD4-208ENST00000509620 GABBR2O75899 941 aa11.04□□□□□ -0.64
OTUD4-208ENST00000509620 RIOK3O14730 519 aaKnown RBP11.03□□□□□ -0.64
OTUD4-208ENST00000509620 PCDH10Q9P2E7 1040 aa11.02□□□□□ -0.65
OTUD4-208ENST00000509620 MAP3K13O43283 966 aa11.01□□□□□ -0.65
OTUD4-208ENST00000509620 KIF12Q96FN5 646 aa11.01□□□□□ -0.65
OTUD4-208ENST00000509620 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
OTUD4-208ENST00000509620 PCDHB13Q9Y5F0 798 aa11.01□□□□□ -0.65
OTUD4-208ENST00000509620 ZNF579Q8NAF0 562 aaKnown RBP10.98□□□□□ -0.65
OTUD4-208ENST00000509620 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
OTUD4-208ENST00000509620 POTEMA6NI47 508 aa10.96□□□□□ -0.65
OTUD4-208ENST00000509620 IFNL1Q8IU54 200 aa10.96□□□□□ -0.65
OTUD4-208ENST00000509620 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
OTUD4-208ENST00000509620 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.94□□□□□ -0.66
OTUD4-208ENST00000509620 ZNF467Q7Z7K2 595 aaPredicted RBP10.94□□□□□ -0.66
OTUD4-208ENST00000509620 ZFP91Q96JP5 570 aaPredicted RBP10.94□□□□□ -0.66
OTUD4-208ENST00000509620 MS4A3Q96HJ5 214 aa10.92□□□□□ -0.66
OTUD4-208ENST00000509620 HS6ST3Q8IZP7 471 aa10.91□□□□□ -0.66
OTUD4-208ENST00000509620 SGIP1Q9BQI5 828 aa10.9□□□□□ -0.66
OTUD4-208ENST00000509620 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
OTUD4-208ENST00000509620 STK25O00506 426 aa10.89□□□□□ -0.67
OTUD4-208ENST00000509620 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
OTUD4-208ENST00000509620 BCL11BQ9C0K0 894 aaPredicted RBP10.88□□□□□ -0.67
OTUD4-208ENST00000509620 TAOK2Q9UL54 1235 aa10.88□□□□□ -0.67
OTUD4-208ENST00000509620 PSEN1P49768 467 aa10.87□□□□□ -0.67
OTUD4-208ENST00000509620 POTEGQ6S5H5 508 aa10.87□□□□□ -0.67
OTUD4-208ENST00000509620 BBXQ8WY36 941 aaPredicted RBP10.87□□□□□ -0.67
OTUD4-208ENST00000509620 STK24Q9Y6E0 443 aa10.86□□□□□ -0.67
OTUD4-208ENST00000509620 GALR2O43603 387 aaPredicted RBP10.85□□□□□ -0.67
OTUD4-208ENST00000509620 POTEIP0CG38 1075 aa10.83□□□□□ -0.68
OTUD4-208ENST00000509620 NKX1-1Q15270 411 aaPredicted RBP10.83□□□□□ -0.68
OTUD4-208ENST00000509620 PLCB2Q00722 1185 aa10.8□□□□□ -0.68
OTUD4-208ENST00000509620 DNAJC5Q9H3Z4 198 aa10.79□□□□□ -0.68
OTUD4-208ENST00000509620 PAXIP1Q6ZW49 1069 aaPredicted RBP10.78□□□□□ -0.68
OTUD4-208ENST00000509620 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.78□□□□□ -0.68
OTUD4-208ENST00000509620 TMEM106CQ9BVX2 250 aa10.77□□□□□ -0.69
OTUD4-208ENST00000509620 CFAP44Q96MT7 982 aa10.76□□□□□ -0.69
OTUD4-208ENST00000509620 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
OTUD4-208ENST00000509620 BMP2KQ9NSY1 1161 aaPredicted RBP10.74□□□□□ -0.69
OTUD4-208ENST00000509620 SLC24A1O60721 1099 aa10.73□□□□□ -0.69
OTUD4-208ENST00000509620 TTLL13PA6NNM8 815 aa10.72□□□□□ -0.69
OTUD4-208ENST00000509620 TIE1P35590 1138 aa10.72□□□□□ -0.69
OTUD4-208ENST00000509620 EFCAB3Q8N7B9 438 aa10.72□□□□□ -0.69
OTUD4-208ENST00000509620 SPRYD3Q8NCJ5 442 aa10.71□□□□□ -0.69
OTUD4-208ENST00000509620 GTPBP6O43824 516 aaPredicted RBP10.7□□□□□ -0.7
OTUD4-208ENST00000509620 CLCN6P51797 869 aa10.7□□□□□ -0.7
OTUD4-208ENST00000509620 OTUD5Q96G74 571 aa10.68□□□□□ -0.7
OTUD4-208ENST00000509620 HAP1P54257 671 aaPredicted RBP10.67□□□□□ -0.7
OTUD4-208ENST00000509620 ATN1P54259 1190 aaPredicted RBP10.67□□□□□ -0.7
OTUD4-208ENST00000509620 MFRPQ9BY79 579 aa10.67□□□□□ -0.7
OTUD4-208ENST00000509620 ATMINO43313 823 aaPredicted RBP10.65□□□□□ -0.7
OTUD4-208ENST00000509620 PHF8Q9UPP1 1060 aa10.65□□□□□ -0.7
OTUD4-208ENST00000509620 TRIM35Q9UPQ4 493 aa10.65□□□□□ -0.7
OTUD4-208ENST00000509620 ASTLQ6HA08 431 aaPredicted RBP10.63□□□□□ -0.71
OTUD4-208ENST00000509620 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
OTUD4-208ENST00000509620 FBXO22Q8NEZ5 403 aa10.62□□□□□ -0.71
OTUD4-208ENST00000509620 TSHZ2Q9NRE2 1034 aa10.62□□□□□ -0.71
OTUD4-208ENST00000509620 SOX12O15370 315 aa10.6□□□□□ -0.71
OTUD4-208ENST00000509620 PELP1Q8IZL8 1130 aaKnown RBP10.6□□□□□ -0.71
OTUD4-208ENST00000509620 MKRN3Q13064 507 aaKnown RBP10.59□□□□□ -0.71
OTUD4-208ENST00000509620 MS4A4AQ96JQ5 239 aa10.59□□□□□ -0.71
OTUD4-208ENST00000509620 DCBLD2Q96PD2 775 aa10.59□□□□□ -0.71
OTUD4-208ENST00000509620 NLRP6P59044 892 aa10.58□□□□□ -0.72
OTUD4-208ENST00000509620 PPP1R37O75864 691 aa10.57□□□□□ -0.72
OTUD4-208ENST00000509620 RYDENQ9NUL5 291 aaKnown RBP10.54□□□□□ -0.72
OTUD4-208ENST00000509620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.54□□□□□ -0.722e-6■□□□□ 11
OTUD4-208ENST00000509620 DPY19L2Q6NUT2 758 aa10.51□□□□□ -0.73
OTUD4-208ENST00000509620 ILDR1Q86SU0 546 aaPredicted RBP10.51□□□□□ -0.73
OTUD4-208ENST00000509620 IRX5P78411 483 aaPredicted RBP10.5□□□□□ -0.73
OTUD4-208ENST00000509620 KDM2AQ9Y2K7 1162 aa10.5□□□□□ -0.73
OTUD4-208ENST00000509620 PDCD7Q8N8D1 485 aaKnown RBP10.49□□□□□ -0.73
OTUD4-208ENST00000509620 IER5LQ5T953 404 aa10.48□□□□□ -0.73
OTUD4-208ENST00000509620 CADPS2Q86UW7 1296 aa10.48□□□□□ -0.73
OTUD4-208ENST00000509620 COLQQ9Y215 455 aaPredicted RBP10.48□□□□□ -0.73
OTUD4-208ENST00000509620 POTEFA5A3E0 1075 aa10.47□□□□□ -0.73
OTUD4-208ENST00000509620 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
OTUD4-208ENST00000509620 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
OTUD4-208ENST00000509620 SLC39A7Q92504 469 aa10.43□□□□□ -0.74
OTUD4-208ENST00000509620 METRNQ9UJH8 293 aa10.43□□□□□ -0.74
OTUD4-208ENST00000509620 PLCG2P16885 1265 aa10.42□□□□□ -0.74
OTUD4-208ENST00000509620 POTEB2H3BUK9 544 aa10.41□□□□□ -0.74
OTUD4-208ENST00000509620 LCE2DQ5TA82 110 aaPredicted RBP10.41□□□□□ -0.74
OTUD4-208ENST00000509620 SEC24BO95487 1268 aa10.4□□□□□ -0.74
OTUD4-208ENST00000509620 C7P10643 843 aa10.4□□□□□ -0.74
OTUD4-208ENST00000509620 MICALL2Q8IY33 904 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms