RNA–Protein interactions for RNA: ENST00000509094.5

FAM13A-213, Transcript of family with sequence similarity 13 member A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM13A, Length 2,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM13A-213	ENST00000509094	GLIPR1L2	Q4G1C9	344 aa		13.82	□□□□□ -0.2
FAM13A-213	ENST00000509094	CADPS	Q9ULU8	1353 aa		13.81	□□□□□ -0.2
FAM13A-213	ENST00000509094	CCER1	Q8TC90	406 aa	Predicted RBP	13.81	□□□□□ -0.2
FAM13A-213	ENST00000509094	KIF21A	Q7Z4S6	1674 aa		13.81	□□□□□ -0.2
FAM13A-213	ENST00000509094	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.81	□□□□□ -0.2
FAM13A-213	ENST00000509094	LAMC3	Q9Y6N6	1575 aa		13.8	□□□□□ -0.2
FAM13A-213	ENST00000509094	CFTR	P13569	1480 aa		13.79	□□□□□ -0.2
FAM13A-213	ENST00000509094	ZMYND15	Q9H091	742 aa		13.79	□□□□□ -0.2
FAM13A-213	ENST00000509094	PDS5B	Q9NTI5	1447 aa		13.79	□□□□□ -0.2
FAM13A-213	ENST00000509094	FGD1	P98174	961 aa		13.78	□□□□□ -0.2
FAM13A-213	ENST00000509094	FANCI	Q9NVI1	1328 aa		13.78	□□□□□ -0.2
FAM13A-213	ENST00000509094	TAOK2	Q9UL54	1235 aa		13.77	□□□□□ -0.2
FAM13A-213	ENST00000509094		A0A0U1RQG5	324 aa	Predicted RBP	13.75	□□□□□ -0.21
FAM13A-213	ENST00000509094	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.75	□□□□□ -0.21
FAM13A-213	ENST00000509094	SYNJ1	O43426	1573 aa		13.75	□□□□□ -0.21
FAM13A-213	ENST00000509094	WRN	Q14191	1432 aa	Predicted RBP eCLIP	13.75	□□□□□ -0.21
FAM13A-213	ENST00000509094	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.75	□□□□□ -0.21
FAM13A-213	ENST00000509094	FANCD2	Q9BXW9	1451 aa		13.72	□□□□□ -0.21
FAM13A-213	ENST00000509094	VSIG10	Q8N0Z9	540 aa		13.69	□□□□□ -0.22
FAM13A-213	ENST00000509094	RUSC2	Q8N2Y8	1516 aa		13.69	□□□□□ -0.22
FAM13A-213	ENST00000509094	BCAN	Q96GW7	911 aa		13.69	□□□□□ -0.22
FAM13A-213	ENST00000509094	SOGA1	O94964	1423 aa		13.69	□□□□□ -0.22
FAM13A-213	ENST00000509094	MRC2	Q9UBG0	1479 aa		13.67	□□□□□ -0.22
FAM13A-213	ENST00000509094	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.67	□□□□□ -0.22
FAM13A-213	ENST00000509094	CUX1	P39880	1505 aa		13.66	□□□□□ -0.22
FAM13A-213	ENST00000509094	AAMP	Q13685	434 aa		13.66	□□□□□ -0.22
FAM13A-213	ENST00000509094	FBXO3	Q9UK99	471 aa		13.65	□□□□□ -0.22
FAM13A-213	ENST00000509094	BRD2	P25440	801 aa	Known RBP	13.64	□□□□□ -0.23
FAM13A-213	ENST00000509094	C14orf37	Q86TY3	774 aa		13.63	□□□□□ -0.23
FAM13A-213	ENST00000509094	RBM10	P98175	930 aa	Known RBP	13.63	□□□□□ -0.23
FAM13A-213	ENST00000509094	WDR62	O43379	1518 aa		13.61	□□□□□ -0.23
FAM13A-213	ENST00000509094	PRDM2	Q13029	1718 aa		13.61	□□□□□ -0.23
FAM13A-213	ENST00000509094	CEP164	Q9UPV0	1460 aa		13.61	□□□□□ -0.23
FAM13A-213	ENST00000509094	CHMP4A	Q9BY43	222 aa		13.6	□□□□□ -0.23
FAM13A-213	ENST00000509094	NBR1	Q14596	966 aa		13.59	□□□□□ -0.23
FAM13A-213	ENST00000509094	OSCAR	Q8IYS5	282 aa		13.58	□□□□□ -0.24
FAM13A-213	ENST00000509094	URB2	Q14146	1524 aa	Known RBP	13.58	□□□□□ -0.24
FAM13A-213	ENST00000509094	RAD54L2	Q9Y4B4	1467 aa		13.57	□□□□□ -0.24
FAM13A-213	ENST00000509094	TOP2B	Q02880	1626 aa		13.56	□□□□□ -0.24
FAM13A-213	ENST00000509094	FGD5	Q6ZNL6	1462 aa		13.55	□□□□□ -0.24
FAM13A-213	ENST00000509094	FKBP8	Q14318	412 aa		13.55	□□□□□ -0.24
FAM13A-213	ENST00000509094	RSPH6A	Q9H0K4	717 aa		13.55	□□□□□ -0.24
FAM13A-213	ENST00000509094	TOPBP1	Q92547	1522 aa		13.53	□□□□□ -0.24
FAM13A-213	ENST00000509094	KCNA4	P22459	653 aa		13.52	□□□□□ -0.24
FAM13A-213	ENST00000509094	RTL5	Q5HYW3	569 aa	Predicted RBP	13.52	□□□□□ -0.24
FAM13A-213	ENST00000509094	ZNF326	Q5BKZ1	582 aa	Known RBP	13.52	□□□□□ -0.25
FAM13A-213	ENST00000509094	TPRN	Q4KMQ1	711 aa		13.51	□□□□□ -0.25
FAM13A-213	ENST00000509094	BIVM-ERCC5	R4GMW8	1640 aa		13.5	□□□□□ -0.25
FAM13A-213	ENST00000509094	POLA1	P09884	1462 aa	Predicted RBP	13.49	□□□□□ -0.25
FAM13A-213	ENST00000509094	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.49	□□□□□ -0.25
FAM13A-213	ENST00000509094	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.48	□□□□□ -0.25
FAM13A-213	ENST00000509094	TDRD9	Q8NDG6	1382 aa	Known RBP	13.48	□□□□□ -0.25
FAM13A-213	ENST00000509094	RSPH4A	Q5TD94	716 aa		13.47	□□□□□ -0.25
FAM13A-213	ENST00000509094	DNMBP	Q6XZF7	1577 aa		13.46	□□□□□ -0.25
FAM13A-213	ENST00000509094	ITGAE	P38570	1179 aa		13.46	□□□□□ -0.25
FAM13A-213	ENST00000509094	UBTF	P17480	764 aa	Known RBP	13.44	□□□□□ -0.26
FAM13A-213	ENST00000509094	DHX37	Q8IY37	1157 aa	Known RBP	13.44	□□□□□ -0.26
FAM13A-213	ENST00000509094	CNKSR2	Q8WXI2	1034 aa		13.44	□□□□□ -0.26
FAM13A-213	ENST00000509094	NOP58	Q9Y2X3	529 aa	Known RBP	13.44	□□□□□ -0.26
FAM13A-213	ENST00000509094	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.44	□□□□□ -0.26
FAM13A-213	ENST00000509094	C11orf95	C9JLR9	678 aa	Predicted RBP	13.43	□□□□□ -0.26
FAM13A-213	ENST00000509094	HAP1	P54257	671 aa	Predicted RBP	13.43	□□□□□ -0.26
FAM13A-213	ENST00000509094	AQR	O60306	1485 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
FAM13A-213	ENST00000509094	CYB5RL	Q6IPT4	315 aa		13.38	□□□□□ -0.27
FAM13A-213	ENST00000509094	CDK11B	P21127	795 aa	Known RBP	13.37	□□□□□ -0.27
FAM13A-213	ENST00000509094	RAPGEF2	Q9Y4G8	1499 aa		13.36	□□□□□ -0.27
FAM13A-213	ENST00000509094	KIF27	Q86VH2	1401 aa		13.36	□□□□□ -0.27
FAM13A-213	ENST00000509094	RIMBP3C	A6NJZ7	1639 aa		13.35	□□□□□ -0.27
FAM13A-213	ENST00000509094	RIMBP3B	A6NNM3	1639 aa		13.35	□□□□□ -0.27
FAM13A-213	ENST00000509094	RIMBP3	Q9UFD9	1639 aa		13.35	□□□□□ -0.27
FAM13A-213	ENST00000509094	HSP90B1	P14625	803 aa	Known RBP	13.34	□□□□□ -0.27
FAM13A-213	ENST00000509094	FBLN2	P98095	1184 aa		13.34	□□□□□ -0.27
FAM13A-213	ENST00000509094	ARHGEF11	O15085	1522 aa		13.32	□□□□□ -0.28
FAM13A-213	ENST00000509094	PAK3	O75914	559 aa	Predicted RBP	13.31	□□□□□ -0.28
FAM13A-213	ENST00000509094	IGF1R	P08069	1367 aa		13.31	□□□□□ -0.28
FAM13A-213	ENST00000509094	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.31	□□□□□ -0.28
FAM13A-213	ENST00000509094	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
FAM13A-213	ENST00000509094	BRPF3	Q9ULD4	1205 aa		13.3	□□□□□ -0.28
FAM13A-213	ENST00000509094	IFT140	Q96RY7	1462 aa		13.3	□□□□□ -0.28
FAM13A-213	ENST00000509094	TARBP1	Q13395	1621 aa	Known RBP	13.3	□□□□□ -0.28
FAM13A-213	ENST00000509094	TRH	P20396	242 aa	Predicted RBP	13.29	□□□□□ -0.28
FAM13A-213	ENST00000509094	ABCA10	Q8WWZ4	1543 aa		13.29	□□□□□ -0.28
FAM13A-213	ENST00000509094	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.28	□□□□□ -0.28
FAM13A-213	ENST00000509094	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.28	□□□□□ -0.28
FAM13A-213	ENST00000509094	WASHC2C	Q9Y4E1	1318 aa		13.28	□□□□□ -0.28
FAM13A-213	ENST00000509094	GAPVD1	Q14C86	1478 aa		13.27	□□□□□ -0.28
FAM13A-213	ENST00000509094	WASHC2A	Q641Q2	1341 aa		13.27	□□□□□ -0.28
FAM13A-213	ENST00000509094	EEA1	Q15075	1411 aa		13.25	□□□□□ -0.29
FAM13A-213	ENST00000509094	WDR97	A6NE52	1622 aa		13.25	□□□□□ -0.29
FAM13A-213	ENST00000509094	RRP9	O43818	475 aa	Known RBP	13.25	□□□□□ -0.29
FAM13A-213	ENST00000509094	P3H3	Q8IVL6	736 aa		13.25	□□□□□ -0.29
FAM13A-213	ENST00000509094	CARMIL1	Q5VZK9	1371 aa		13.25	□□□□□ -0.29
FAM13A-213	ENST00000509094	GOLGA3	Q08378	1498 aa		13.24	□□□□□ -0.29
FAM13A-213	ENST00000509094	EIF4G3	O43432	1585 aa	Known RBP	13.24	□□□□□ -0.29
FAM13A-213	ENST00000509094	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.23	□□□□□ -0.29
FAM13A-213	ENST00000509094	FAM43A	Q8N2R8	423 aa		13.21	□□□□□ -0.29
FAM13A-213	ENST00000509094	ABCA5	Q8WWZ7	1642 aa		13.21	□□□□□ -0.29
FAM13A-213	ENST00000509094	PRX	Q9BXM0	1461 aa		13.21	□□□□□ -0.3
FAM13A-213	ENST00000509094	NEFM	P07197	916 aa		13.2	□□□□□ -0.3
FAM13A-213	ENST00000509094	CEP162	Q5TB80	1403 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms