RNA–Protein interactions for RNA: ENST00000509094.5

FAM13A-213, Transcript of family with sequence similarity 13 member A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM13A, Length 2,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-213ENST00000509094 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
FAM13A-213ENST00000509094 PELP1Q8IZL8 1130 aaKnown RBP17.55■□□□□ 0.4
FAM13A-213ENST00000509094 MYT1Q01538 1121 aa17.46■□□□□ 0.39
FAM13A-213ENST00000509094 TTBK1Q5TCY1 1321 aaPredicted RBP17.05■□□□□ 0.32
FAM13A-213ENST00000509094 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
FAM13A-213ENST00000509094 ABCC9O60706 1549 aa16.49■□□□□ 0.23
FAM13A-213ENST00000509094 PRKCSHP14314 528 aaPredicted RBP16.3■□□□□ 0.2
FAM13A-213ENST00000509094 ERICH6Q7L0X2 663 aa16.3■□□□□ 0.2
FAM13A-213ENST00000509094 CCDC180Q9P1Z9 1646 aa16.24■□□□□ 0.19
FAM13A-213ENST00000509094 HRCP23327 699 aa16.24■□□□□ 0.19
FAM13A-213ENST00000509094 APLP2Q06481 763 aa16.24■□□□□ 0.19
FAM13A-213ENST00000509094 DCAF8L2P0C7V8 631 aa16.08■□□□□ 0.16
FAM13A-213ENST00000509094 DAXXQ9UER7 740 aaPredicted RBP16.05■□□□□ 0.16
FAM13A-213ENST00000509094 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
FAM13A-213ENST00000509094 BCL11AQ9H165 835 aa15.87■□□□□ 0.13
FAM13A-213ENST00000509094 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.12
FAM13A-213ENST00000509094 DNAJC5BQ9UF47 199 aa15.75■□□□□ 0.11
FAM13A-213ENST00000509094 SHROOM4Q9ULL8 1493 aa15.74■□□□□ 0.11
FAM13A-213ENST00000509094 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
FAM13A-213ENST00000509094 FAM9AQ8IZU1 332 aaPredicted RBP15.67■□□□□ 0.1
FAM13A-213ENST00000509094 CENPBP07199 599 aaPredicted RBP15.45■□□□□ 0.06
FAM13A-213ENST00000509094 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
FAM13A-213ENST00000509094 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
FAM13A-213ENST00000509094 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
FAM13A-213ENST00000509094 PCGF6Q9BYE7 350 aa15.3■□□□□ 0.04
FAM13A-213ENST00000509094 ACIN1Q9UKV3 1341 aaKnown RBP15.27■□□□□ 0.04
FAM13A-213ENST00000509094 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.03
FAM13A-213ENST00000509094 NACADO15069 1562 aa15.24■□□□□ 0.03
FAM13A-213ENST00000509094 EIF5BO60841 1220 aaKnown RBP15.24■□□□□ 0.03
FAM13A-213ENST00000509094 GTF3C3Q9Y5Q9 886 aa15.2■□□□□ 0.02
FAM13A-213ENST00000509094 NEUROD1Q13562 356 aa15.13■□□□□ 0.01
FAM13A-213ENST00000509094 UNC13AQ9UPW8 1703 aa15.1■□□□□ 0.01
FAM13A-213ENST00000509094 ANP32EQ9BTT0 268 aa15.09■□□□□ 0.01
FAM13A-213ENST00000509094 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
FAM13A-213ENST00000509094 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
FAM13A-213ENST00000509094 BICRAQ9NZM4 1560 aa15.05■□□□□ -0
FAM13A-213ENST00000509094 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
FAM13A-213ENST00000509094 ZEB1P37275 1124 aaPredicted RBP14.97□□□□□ -0.01
FAM13A-213ENST00000509094 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
FAM13A-213ENST00000509094 CECR2Q9BXF3 1484 aa14.81□□□□□ -0.04
FAM13A-213ENST00000509094 ARXQ96QS3 562 aa14.8□□□□□ -0.04
FAM13A-213ENST00000509094 CC2D2AQ9P2K1 1620 aa14.78□□□□□ -0.04
FAM13A-213ENST00000509094 ANO8Q9HCE9 1232 aaPredicted RBP14.73□□□□□ -0.05
FAM13A-213ENST00000509094 RANGAP1P46060 587 aaPredicted RBP14.72□□□□□ -0.05
FAM13A-213ENST00000509094 UBE2Q2Q8WVN8 375 aa14.71□□□□□ -0.05
FAM13A-213ENST00000509094 EIF4G1Q04637 1599 aaKnown RBP14.69□□□□□ -0.06
FAM13A-213ENST00000509094 MROH2BQ7Z745 1585 aa14.64□□□□□ -0.07
FAM13A-213ENST00000509094 PLEKHG5O94827 1062 aa14.64□□□□□ -0.07
FAM13A-213ENST00000509094 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
FAM13A-213ENST00000509094 WIZO95785 1651 aa14.55□□□□□ -0.08
FAM13A-213ENST00000509094 TRIM26Q12899 539 aaPredicted RBP14.53□□□□□ -0.08
FAM13A-213ENST00000509094 PODXL2Q9NZ53 605 aa14.51□□□□□ -0.09
FAM13A-213ENST00000509094 RTN4Q9NQC3 1192 aaKnown RBP14.5□□□□□ -0.09
FAM13A-213ENST00000509094 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
FAM13A-213ENST00000509094 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
FAM13A-213ENST00000509094 BAZ1AQ9NRL2 1556 aaPredicted RBP14.46□□□□□ -0.09
FAM13A-213ENST00000509094 PLPPR3Q6T4P5 718 aa14.43□□□□□ -0.1
FAM13A-213ENST00000509094 TSHZ2Q9NRE2 1034 aa14.43□□□□□ -0.1
FAM13A-213ENST00000509094 PKNOX2Q96KN3 472 aa14.4□□□□□ -0.1
FAM13A-213ENST00000509094 SALL2Q9Y467 1007 aaPredicted RBP14.39□□□□□ -0.11
FAM13A-213ENST00000509094 DIEXFQ68CQ4 756 aaKnown RBP14.37□□□□□ -0.11
FAM13A-213ENST00000509094 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
FAM13A-213ENST00000509094 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
FAM13A-213ENST00000509094 CCDC136Q96JN2 1154 aa14.35□□□□□ -0.11
FAM13A-213ENST00000509094 TIMELESSQ9UNS1 1208 aa14.35□□□□□ -0.11
FAM13A-213ENST00000509094 ATAD2BQ9ULI0 1458 aa14.29□□□□□ -0.12
FAM13A-213ENST00000509094 ERICH6BQ5W0A0 696 aa14.27□□□□□ -0.13
FAM13A-213ENST00000509094 YTHDC1Q96MU7 727 aaKnown RBP14.25□□□□□ -0.13
FAM13A-213ENST00000509094 HOMEZQ8IX15 550 aa14.25□□□□□ -0.13
FAM13A-213ENST00000509094 BAZ1BQ9UIG0 1483 aaKnown RBP14.24□□□□□ -0.13
FAM13A-213ENST00000509094 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
FAM13A-213ENST00000509094 CLSPNQ9HAW4 1339 aa14.2□□□□□ -0.14
FAM13A-213ENST00000509094 ERCC6Q03468 1493 aa14.19□□□□□ -0.14
FAM13A-213ENST00000509094 MYT1LQ9UL68 1186 aa14.19□□□□□ -0.14
FAM13A-213ENST00000509094 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
FAM13A-213ENST00000509094 SUPT16HQ9Y5B9 1047 aaKnown RBP14.17□□□□□ -0.14
FAM13A-213ENST00000509094 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
FAM13A-213ENST00000509094 AMER1Q5JTC6 1135 aaPredicted RBP14.15□□□□□ -0.14
FAM13A-213ENST00000509094 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
FAM13A-213ENST00000509094 NEFLP07196 543 aa14.14□□□□□ -0.15
FAM13A-213ENST00000509094 PEG3Q9GZU2 1588 aa14.13□□□□□ -0.15
FAM13A-213ENST00000509094 NESP48681 1621 aa14.12□□□□□ -0.15
FAM13A-213ENST00000509094 PDIA4P13667 645 aaKnown RBP14.12□□□□□ -0.15
FAM13A-213ENST00000509094 DEKP35659 375 aaKnown RBP14.11□□□□□ -0.15
FAM13A-213ENST00000509094 CUX2O14529 1486 aa14.11□□□□□ -0.15
FAM13A-213ENST00000509094 CHIC1Q5VXU3 224 aa14.1□□□□□ -0.15
FAM13A-213ENST00000509094 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.1□□□□□ -0.15
FAM13A-213ENST00000509094 TULP1O00294 542 aaPredicted RBP14.07□□□□□ -0.16
FAM13A-213ENST00000509094 PDE4CQ08493 712 aa14.01□□□□□ -0.17
FAM13A-213ENST00000509094 HMGXB3Q12766 1538 aa14.01□□□□□ -0.17
FAM13A-213ENST00000509094 ABCC8Q09428 1581 aa14□□□□□ -0.17
FAM13A-213ENST00000509094 RBM19Q9Y4C8 960 aaKnown RBP13.99□□□□□ -0.17
FAM13A-213ENST00000509094 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
FAM13A-213ENST00000509094 MSH5O43196 834 aa13.95□□□□□ -0.18
FAM13A-213ENST00000509094 THOC2Q8NI27 1593 aaKnown RBP13.86□□□□□ -0.19
FAM13A-213ENST00000509094 MIER1Q8N108 512 aa13.85□□□□□ -0.19
FAM13A-213ENST00000509094 LOC105371045A0A1W2PR82 267 aa13.84□□□□□ -0.19
FAM13A-213ENST00000509094 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.2
FAM13A-213ENST00000509094 NPM2Q86SE8 214 aaKnown RBP13.83□□□□□ -0.2
FAM13A-213ENST00000509094 IL27Q8NEV9 243 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms