RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 PLSCR2Q9NRY7 297 aa15.56■□□□□ 0.08
GYPB-210ENST00000508841 GALR2O43603 387 aaPredicted RBP15.52■□□□□ 0.08
GYPB-210ENST00000508841 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
GYPB-210ENST00000508841 OTUD5Q96G74 571 aa15.4■□□□□ 0.06
GYPB-210ENST00000508841 PKD2Q13563 968 aa15.39■□□□□ 0.05
GYPB-210ENST00000508841 PHF12Q96QT6 1004 aa15.38■□□□□ 0.05
GYPB-210ENST00000508841 POTEB2H3BUK9 544 aa15.35■□□□□ 0.05
GYPB-210ENST00000508841 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
GYPB-210ENST00000508841 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
GYPB-210ENST00000508841 ECM2O94769 699 aaPredicted RBP15.3■□□□□ 0.04
GYPB-210ENST00000508841 GSE1Q14687 1217 aa15.29■□□□□ 0.04
GYPB-210ENST00000508841 CIZ1Q9ULV3 898 aaPredicted RBP15.28■□□□□ 0.04
GYPB-210ENST00000508841 MNX1P50219 401 aaPredicted RBP15.25■□□□□ 0.03
GYPB-210ENST00000508841 PELP1Q8IZL8 1130 aaKnown RBP15.25■□□□□ 0.03
GYPB-210ENST00000508841 NUBP1P53384 320 aa15.24■□□□□ 0.03
GYPB-210ENST00000508841 POTEMA6NI47 508 aa15.23■□□□□ 0.03
GYPB-210ENST00000508841 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
GYPB-210ENST00000508841 FAM212AQ96EL1 285 aa15.2■□□□□ 0.02
GYPB-210ENST00000508841 POTEGQ6S5H5 508 aa15.17■□□□□ 0.02
GYPB-210ENST00000508841 MS4A3Q96HJ5 214 aa15.16■□□□□ 0.02
GYPB-210ENST00000508841 DCAF8Q5TAQ9 597 aa15.15■□□□□ 0.02
GYPB-210ENST00000508841 METRNQ9UJH8 293 aa15.15■□□□□ 0.02
GYPB-210ENST00000508841 ASTLQ6HA08 431 aaPredicted RBP15.14■□□□□ 0.01
GYPB-210ENST00000508841 SLC24A1O60721 1099 aa15.12■□□□□ 0.01
GYPB-210ENST00000508841 SLC39A7Q92504 469 aa15.12■□□□□ 0.01
GYPB-210ENST00000508841 ATMINO43313 823 aaPredicted RBP15.11■□□□□ 0.01
GYPB-210ENST00000508841 C7P10643 843 aa15.09■□□□□ 0.01
GYPB-210ENST00000508841 RGL2O15211 777 aa15.06■□□□□ 0
GYPB-210ENST00000508841 RASEFQ8IZ41 740 aa15.06■□□□□ 0
GYPB-210ENST00000508841 POTEJP0CG39 1038 aa15.04■□□□□ -0
GYPB-210ENST00000508841 MAMSTRQ6ZN01 415 aa15.04■□□□□ -0
GYPB-210ENST00000508841 TSPYL2Q9H2G4 693 aaPredicted RBP15.03■□□□□ -0
GYPB-210ENST00000508841 TAOK2Q9UL54 1235 aa15.03■□□□□ -0
GYPB-210ENST00000508841 CHRM1P11229 460 aaPredicted RBP15.01□□□□□ -0.01
GYPB-210ENST00000508841 PCDH10Q9P2E7 1040 aa14.99□□□□□ -0.01
GYPB-210ENST00000508841 ATN1P54259 1190 aaPredicted RBP14.96□□□□□ -0.01
GYPB-210ENST00000508841 CCDC61Q9Y6R9 512 aa14.95□□□□□ -0.02
GYPB-210ENST00000508841 BBXQ8WY36 941 aaPredicted RBP14.93□□□□□ -0.02
GYPB-210ENST00000508841 SCUBE2Q9NQ36 999 aa14.93□□□□□ -0.02
GYPB-210ENST00000508841 RIOK3O14730 519 aaKnown RBP14.92□□□□□ -0.02
GYPB-210ENST00000508841 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.92□□□□□ -0.02
GYPB-210ENST00000508841 PLCB2Q00722 1185 aa14.91□□□□□ -0.02
GYPB-210ENST00000508841 KIF12Q96FN5 646 aa14.9□□□□□ -0.02
GYPB-210ENST00000508841 FAM163AQ96GL9 167 aaPredicted RBP14.89□□□□□ -0.03
GYPB-210ENST00000508841 LCE2DQ5TA82 110 aaPredicted RBP14.87□□□□□ -0.03
GYPB-210ENST00000508841 RNF25Q96BH1 459 aaPredicted RBP14.87□□□□□ -0.03
GYPB-210ENST00000508841 PYGBP11216 843 aa14.86□□□□□ -0.03
GYPB-210ENST00000508841 VGFO15240 615 aaPredicted RBP14.85□□□□□ -0.03
GYPB-210ENST00000508841 CHGAP10645 457 aaKnown RBP14.85□□□□□ -0.03
GYPB-210ENST00000508841 BMP2KQ9NSY1 1161 aaPredicted RBP14.85□□□□□ -0.03
GYPB-210ENST00000508841 HS6ST3Q8IZP7 471 aa14.83□□□□□ -0.04
GYPB-210ENST00000508841 POTEFA5A3E0 1075 aa14.82□□□□□ -0.04
GYPB-210ENST00000508841 TRPC6Q9Y210 931 aa14.82□□□□□ -0.04
GYPB-210ENST00000508841 ZNF467Q7Z7K2 595 aaPredicted RBP14.8□□□□□ -0.04
GYPB-210ENST00000508841 SGIP1Q9BQI5 828 aa14.8□□□□□ -0.04
GYPB-210ENST00000508841 MAP3K13O43283 966 aa14.79□□□□□ -0.04
GYPB-210ENST00000508841 TIE1P35590 1138 aa14.78□□□□□ -0.04
GYPB-210ENST00000508841 DNAJC5Q9H3Z4 198 aa14.77□□□□□ -0.05
GYPB-210ENST00000508841 SEC24BO95487 1268 aa14.72□□□□□ -0.05
GYPB-210ENST00000508841 STK25O00506 426 aa14.71□□□□□ -0.05
GYPB-210ENST00000508841 SPRYD3Q8NCJ5 442 aa14.7□□□□□ -0.06
GYPB-210ENST00000508841 TTLL13PA6NNM8 815 aa14.69□□□□□ -0.06
GYPB-210ENST00000508841 COLQQ9Y215 455 aaPredicted RBP14.69□□□□□ -0.06
GYPB-210ENST00000508841 PAXIP1Q6ZW49 1069 aaPredicted RBP14.68□□□□□ -0.06
GYPB-210ENST00000508841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.66□□□□□ -0.06
GYPB-210ENST00000508841 HAP1P54257 671 aaPredicted RBP14.66□□□□□ -0.06
GYPB-210ENST00000508841 PDAP1Q13442 181 aaKnown RBP14.66□□□□□ -0.06
GYPB-210ENST00000508841 ZFP91Q96JP5 570 aaPredicted RBP14.66□□□□□ -0.06
GYPB-210ENST00000508841 CFAP44Q96MT7 982 aa14.65□□□□□ -0.06
GYPB-210ENST00000508841 PCDHB13Q9Y5F0 798 aa14.64□□□□□ -0.07
GYPB-210ENST00000508841 BCL11BQ9C0K0 894 aaPredicted RBP14.63□□□□□ -0.07
GYPB-210ENST00000508841 TRIM35Q9UPQ4 493 aa14.62□□□□□ -0.07
GYPB-210ENST00000508841 STK24Q9Y6E0 443 aa14.62□□□□□ -0.07
GYPB-210ENST00000508841 RYDENQ9NUL5 291 aaKnown RBP14.61□□□□□ -0.07
GYPB-210ENST00000508841 IER5LQ5T953 404 aa14.6□□□□□ -0.07
GYPB-210ENST00000508841 CDAN1Q8IWY9 1227 aa14.58□□□□□ -0.08
GYPB-210ENST00000508841 PCDHB8Q9UN66 801 aa14.58□□□□□ -0.08
GYPB-210ENST00000508841 PSEN1P49768 467 aa14.55□□□□□ -0.08
GYPB-210ENST00000508841 IFNL1Q8IU54 200 aa14.54□□□□□ -0.08
GYPB-210ENST00000508841 VSIG10Q8N0Z9 540 aa14.53□□□□□ -0.08
GYPB-210ENST00000508841 NKX1-1Q15270 411 aaPredicted RBP14.51□□□□□ -0.09
GYPB-210ENST00000508841 SLAIN1Q8ND83 568 aa14.51□□□□□ -0.09
GYPB-210ENST00000508841 ST18O60284 1047 aa14.46□□□□□ -0.09
GYPB-210ENST00000508841 GTPBP6O43824 516 aaPredicted RBP14.45□□□□□ -0.1
GYPB-210ENST00000508841 PLCG2P16885 1265 aa14.45□□□□□ -0.1
GYPB-210ENST00000508841 TMEM106CQ9BVX2 250 aa14.45□□□□□ -0.1
GYPB-210ENST00000508841 IRX5P78411 483 aaPredicted RBP14.36□□□□□ -0.11
GYPB-210ENST00000508841 TSHZ2Q9NRE2 1034 aa14.36□□□□□ -0.11
GYPB-210ENST00000508841 SOX12O15370 315 aa14.35□□□□□ -0.11
GYPB-210ENST00000508841 CABP2Q9NPB3 220 aa14.35□□□□□ -0.11
GYPB-210ENST00000508841 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
GYPB-210ENST00000508841 NLRP6P59044 892 aa14.3□□□□□ -0.12
GYPB-210ENST00000508841 EFCAB3Q8N7B9 438 aa14.3□□□□□ -0.12
GYPB-210ENST00000508841 MFRPQ9BY79 579 aa14.28□□□□□ -0.12
GYPB-210ENST00000508841 OCEL1Q9H607 264 aa14.28□□□□□ -0.12
GYPB-210ENST00000508841 TMEM121BQ9BXQ6 578 aaPredicted RBP14.27□□□□□ -0.13
GYPB-210ENST00000508841 KDM2AQ9Y2K7 1162 aa14.25□□□□□ -0.13
GYPB-210ENST00000508841 SNPHO15079 494 aa14.24□□□□□ -0.13
GYPB-210ENST00000508841 MMRN1Q13201 1228 aa14.24□□□□□ -0.13
GYPB-210ENST00000508841 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 444.7 ms