RNA–Protein interactions for RNA: ENST00000507735.5

PALLD-209, Transcript of palladin, cytoskeletal associated protein, humanhuman

TSL 1 (best) BASIC

Gene PALLD, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALLD-209ENST00000507735 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
PALLD-209ENST00000507735 HIRIP3Q9BW71 556 aaPredicted RBP16.85■□□□□ 0.29
PALLD-209ENST00000507735 GLIPR1L2Q4G1C9 344 aa16.82■□□□□ 0.28
PALLD-209ENST00000507735 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
PALLD-209ENST00000507735 RTN4Q9NQC3 1192 aaKnown RBP16.82■□□□□ 0.28
PALLD-209ENST00000507735 FAM9BQ8IZU0 186 aa16.81■□□□□ 0.28
PALLD-209ENST00000507735 CCNB3Q8WWL7 1395 aa16.79■□□□□ 0.28
PALLD-209ENST00000507735 B4GALNT3Q6L9W6 998 aa16.78■□□□□ 0.28
PALLD-209ENST00000507735 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
PALLD-209ENST00000507735 MSH5O43196 834 aa16.76■□□□□ 0.27
PALLD-209ENST00000507735 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
PALLD-209ENST00000507735 MRS2Q9HD23 443 aa16.75■□□□□ 0.27
PALLD-209ENST00000507735 PPM1GO15355 546 aaPredicted RBP16.75■□□□□ 0.27
PALLD-209ENST00000507735 SIN3AQ96ST3 1273 aa16.73■□□□□ 0.27
PALLD-209ENST00000507735 WIZO95785 1651 aa16.72■□□□□ 0.27
PALLD-209ENST00000507735 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
PALLD-209ENST00000507735 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
PALLD-209ENST00000507735 NEFMP07197 916 aa16.71■□□□□ 0.27
PALLD-209ENST00000507735 SMARCA2P51531 1590 aa16.7■□□□□ 0.26
PALLD-209ENST00000507735 IPO9Q96P70 1041 aaKnown RBP16.69■□□□□ 0.26
PALLD-209ENST00000507735 ANO8Q9HCE9 1232 aaPredicted RBP16.69■□□□□ 0.26
PALLD-209ENST00000507735 ZNF777Q9ULD5 760 aaPredicted RBP16.68■□□□□ 0.26
PALLD-209ENST00000507735 RAB3GAP2Q9H2M9 1393 aa16.67■□□□□ 0.26
PALLD-209ENST00000507735 DDRGK1Q96HY6 314 aa16.66■□□□□ 0.26
PALLD-209ENST00000507735 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.66■□□□□ 0.26
PALLD-209ENST00000507735 SETD5Q9C0A6 1442 aa16.65■□□□□ 0.26
PALLD-209ENST00000507735 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
PALLD-209ENST00000507735 NPM1P06748 294 aaKnown RBP eCLIP16.64■□□□□ 0.25
PALLD-209ENST00000507735 LAS1LQ9Y4W2 734 aaKnown RBP16.63■□□□□ 0.25
PALLD-209ENST00000507735 KANK4Q5T7N3 995 aaPredicted RBP16.63■□□□□ 0.25
PALLD-209ENST00000507735 EIF4G2P78344 907 aaKnown RBP eCLIP16.61■□□□□ 0.25
PALLD-209ENST00000507735 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
PALLD-209ENST00000507735 USP35Q9P2H5 1018 aa16.6■□□□□ 0.25
PALLD-209ENST00000507735 PPP1R15AO75807 674 aaPredicted RBP16.59■□□□□ 0.25
PALLD-209ENST00000507735 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
PALLD-209ENST00000507735 PDS5BQ9NTI5 1447 aa16.58■□□□□ 0.25
PALLD-209ENST00000507735 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
PALLD-209ENST00000507735 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.24
PALLD-209ENST00000507735 SALL2Q9Y467 1007 aaPredicted RBP16.56■□□□□ 0.24
PALLD-209ENST00000507735 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
PALLD-209ENST00000507735 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
PALLD-209ENST00000507735 RAPGEF2Q9Y4G8 1499 aa16.51■□□□□ 0.23
PALLD-209ENST00000507735 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
PALLD-209ENST00000507735 CUX2O14529 1486 aa16.5■□□□□ 0.23
PALLD-209ENST00000507735 KIF21BO75037 1637 aa16.49■□□□□ 0.23
PALLD-209ENST00000507735 TMC1Q8TDI8 760 aa16.48■□□□□ 0.23
PALLD-209ENST00000507735 PAK3O75914 559 aaPredicted RBP16.46■□□□□ 0.23
PALLD-209ENST00000507735 IL27Q8NEV9 243 aa16.46■□□□□ 0.23
PALLD-209ENST00000507735 RRBP1Q9P2E9 1410 aaKnown RBP16.46■□□□□ 0.23
PALLD-209ENST00000507735 TCERG1O14776 1098 aaKnown RBP16.46■□□□□ 0.23
PALLD-209ENST00000507735 ZBED9Q6R2W3 1325 aa16.44■□□□□ 0.22
PALLD-209ENST00000507735 RSPH6AQ9H0K4 717 aa16.42■□□□□ 0.22
PALLD-209ENST00000507735 HSPA5P11021 654 aaKnown RBP16.4■□□□□ 0.22
PALLD-209ENST00000507735 ZNF326Q5BKZ1 582 aaKnown RBP16.4■□□□□ 0.22
PALLD-209ENST00000507735 NUDCQ9Y266 331 aa16.4■□□□□ 0.22
PALLD-209ENST00000507735 GSE1Q14687 1217 aa16.38■□□□□ 0.21
PALLD-209ENST00000507735 CHIC2Q9UKJ5 165 aa16.38■□□□□ 0.21
PALLD-209ENST00000507735 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
PALLD-209ENST00000507735 NCAPD3P42695 1498 aa16.37■□□□□ 0.21
PALLD-209ENST00000507735 CARMIL1Q5VZK9 1371 aa16.37■□□□□ 0.21
PALLD-209ENST00000507735 CC2D2AQ9P2K1 1620 aa16.37■□□□□ 0.21
PALLD-209ENST00000507735 FANCD2Q9BXW9 1451 aa16.37■□□□□ 0.21
PALLD-209ENST00000507735 UBE2Q2Q8WVN8 375 aa16.36■□□□□ 0.21
PALLD-209ENST00000507735 NESP48681 1621 aa16.35■□□□□ 0.21
PALLD-209ENST00000507735 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
PALLD-209ENST00000507735 FHAD1B1AJZ9 1412 aa16.33■□□□□ 0.2
PALLD-209ENST00000507735 MTUS2Q5JR59 1369 aa16.32■□□□□ 0.2
PALLD-209ENST00000507735 NAP1L5Q96NT1 182 aaPredicted RBP16.32■□□□□ 0.2
PALLD-209ENST00000507735 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
PALLD-209ENST00000507735 PRKRIP1Q9H875 184 aaPredicted RBP16.31■□□□□ 0.2
PALLD-209ENST00000507735 PDE4AP27815 886 aa16.29■□□□□ 0.2
PALLD-209ENST00000507735 PLEKHD1A6NEE1 506 aa16.29■□□□□ 0.2
PALLD-209ENST00000507735 BECN1Q14457 450 aa16.29■□□□□ 0.2
PALLD-209ENST00000507735 UPF2Q9HAU5 1272 aaKnown RBP16.29■□□□□ 0.2
PALLD-209ENST00000507735 ARHGAP35Q9NRY4 1499 aa16.29■□□□□ 0.2
PALLD-209ENST00000507735 L1TD1Q5T7N2 865 aaKnown RBP16.29■□□□□ 0.2
PALLD-209ENST00000507735 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.28■□□□□ 0.2
PALLD-209ENST00000507735 MS4A1P11836 297 aa16.27■□□□□ 0.19
PALLD-209ENST00000507735 ARXQ96QS3 562 aa16.26■□□□□ 0.19
PALLD-209ENST00000507735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.19
PALLD-209ENST00000507735 ESF1Q9H501 851 aaKnown RBP16.25■□□□□ 0.19
PALLD-209ENST00000507735 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
PALLD-209ENST00000507735 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
PALLD-209ENST00000507735 BRPF3Q9ULD4 1205 aa16.24■□□□□ 0.19
PALLD-209ENST00000507735 CNTLNQ9NXG0 1405 aa16.23■□□□□ 0.19
PALLD-209ENST00000507735 ARAP1Q96P48 1450 aa16.23■□□□□ 0.19
PALLD-209ENST00000507735 RRP7BPQ9NSQ0 103 aa16.22■□□□□ 0.19
PALLD-209ENST00000507735 PKNOX2Q96KN3 472 aa16.22■□□□□ 0.19
PALLD-209ENST00000507735 HSP90AA1P07900 732 aaKnown RBP16.21■□□□□ 0.19
PALLD-209ENST00000507735 RCAN3Q9UKA8 241 aa16.21■□□□□ 0.19
PALLD-209ENST00000507735 ANP32BQ92688 251 aaKnown RBP16.2■□□□□ 0.18
PALLD-209ENST00000507735 PNNQ9H307 717 aaKnown RBP16.19■□□□□ 0.18
PALLD-209ENST00000507735 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
PALLD-209ENST00000507735 CHGAP10645 457 aaKnown RBP16.19■□□□□ 0.18
PALLD-209ENST00000507735 CANXP27824 592 aaKnown RBP16.19■□□□□ 0.18
PALLD-209ENST00000507735 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
PALLD-209ENST00000507735 SENP3Q9H4L4 574 aaPredicted RBP16.18■□□□□ 0.18
PALLD-209ENST00000507735 WASHC2AQ641Q2 1341 aa16.18■□□□□ 0.18
PALLD-209ENST00000507735 TSPY4P0CV99 314 aa16.18■□□□□ 0.18
PALLD-209ENST00000507735 TSPY10P0CW01 314 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms