RNA–Protein interactions for RNA: ENST00000507735.5

PALLD-209, Transcript of palladin, cytoskeletal associated protein, humanhuman

TSL 1 (best) BASIC

Gene PALLD, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALLD-209ENST00000507735 NISCHQ9Y2I1 1504 aa21.79■■□□□ 1.08
PALLD-209ENST00000507735 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
PALLD-209ENST00000507735 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
PALLD-209ENST00000507735 HRCP23327 699 aa20.29■□□□□ 0.84
PALLD-209ENST00000507735 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
PALLD-209ENST00000507735 PCGF6Q9BYE7 350 aa20.11■□□□□ 0.81
PALLD-209ENST00000507735 MYT1Q01538 1121 aa20.01■□□□□ 0.79
PALLD-209ENST00000507735 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
PALLD-209ENST00000507735 ZEB1P37275 1124 aaPredicted RBP19.7■□□□□ 0.74
PALLD-209ENST00000507735 PPARGC1BQ86YN6 1023 aaKnown RBP19.68■□□□□ 0.74
PALLD-209ENST00000507735 TRIM26Q12899 539 aaPredicted RBP19.41■□□□□ 0.7
PALLD-209ENST00000507735 CENPBP07199 599 aaPredicted RBP19.39■□□□□ 0.69
PALLD-209ENST00000507735 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.69
PALLD-209ENST00000507735 ABCC9O60706 1549 aa19.21■□□□□ 0.67
PALLD-209ENST00000507735 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
PALLD-209ENST00000507735 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
PALLD-209ENST00000507735 LOC105371045A0A1W2PR82 267 aa19.01■□□□□ 0.63
PALLD-209ENST00000507735 CCER1Q8TC90 406 aaPredicted RBP18.94■□□□□ 0.62
PALLD-209ENST00000507735 EHMT2Q96KQ7 1210 aa18.93■□□□□ 0.62
PALLD-209ENST00000507735 ACIN1Q9UKV3 1341 aaKnown RBP18.92■□□□□ 0.62
PALLD-209ENST00000507735 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
PALLD-209ENST00000507735 GTF3C3Q9Y5Q9 886 aa18.86■□□□□ 0.61
PALLD-209ENST00000507735 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
PALLD-209ENST00000507735 FAM9AQ8IZU1 332 aaPredicted RBP18.79■□□□□ 0.6
PALLD-209ENST00000507735 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
PALLD-209ENST00000507735 DIEXFQ68CQ4 756 aaKnown RBP18.72■□□□□ 0.59
PALLD-209ENST00000507735 YTHDC1Q96MU7 727 aaKnown RBP18.7■□□□□ 0.58
PALLD-209ENST00000507735 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
PALLD-209ENST00000507735 NEUROD1Q13562 356 aa18.64■□□□□ 0.57
PALLD-209ENST00000507735 TTBK1Q5TCY1 1321 aaPredicted RBP18.6■□□□□ 0.57
PALLD-209ENST00000507735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
PALLD-209ENST00000507735 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.53
PALLD-209ENST00000507735 ZNF316A6NFI3 1004 aaPredicted RBP18.29■□□□□ 0.52
PALLD-209ENST00000507735 ERICH6Q7L0X2 663 aa18.26■□□□□ 0.51
PALLD-209ENST00000507735 RANGAP1P46060 587 aaPredicted RBP18.24■□□□□ 0.51
PALLD-209ENST00000507735 APLP2Q06481 763 aa18.21■□□□□ 0.51
PALLD-209ENST00000507735 CLSPNQ9HAW4 1339 aa18.21■□□□□ 0.51
PALLD-209ENST00000507735 NEFLP07196 543 aa18.16■□□□□ 0.5
PALLD-209ENST00000507735 ANP32EQ9BTT0 268 aa18.01■□□□□ 0.47
PALLD-209ENST00000507735 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
PALLD-209ENST00000507735 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
PALLD-209ENST00000507735 BCL11AQ9H165 835 aa17.95■□□□□ 0.46
PALLD-209ENST00000507735 HNRNPUL2Q1KMD3 747 aaKnown RBP17.93■□□□□ 0.46
PALLD-209ENST00000507735 MIER1Q8N108 512 aa17.93■□□□□ 0.46
PALLD-209ENST00000507735 ATP1B4Q9UN42 357 aaPredicted RBP17.88■□□□□ 0.45
PALLD-209ENST00000507735 BCANQ96GW7 911 aa17.8■□□□□ 0.44
PALLD-209ENST00000507735 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
PALLD-209ENST00000507735 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
PALLD-209ENST00000507735 MYT1LQ9UL68 1186 aa17.65■□□□□ 0.42
PALLD-209ENST00000507735 FKBP8Q14318 412 aa17.62■□□□□ 0.41
PALLD-209ENST00000507735 TSHZ2Q9NRE2 1034 aa17.6■□□□□ 0.41
PALLD-209ENST00000507735 NACADO15069 1562 aa17.59■□□□□ 0.41
PALLD-209ENST00000507735 CDK11AQ9UQ88 783 aaPredicted RBP17.58■□□□□ 0.41
PALLD-209ENST00000507735 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.41
PALLD-209ENST00000507735 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
PALLD-209ENST00000507735 RTL5Q5HYW3 569 aaPredicted RBP17.52■□□□□ 0.4
PALLD-209ENST00000507735 FBLN2P98095 1184 aa17.51■□□□□ 0.39
PALLD-209ENST00000507735 CEP162Q5TB80 1403 aa17.47■□□□□ 0.39
PALLD-209ENST00000507735 ANP32CO43423 234 aa17.41■□□□□ 0.38
PALLD-209ENST00000507735 ITGAEP38570 1179 aa17.37■□□□□ 0.37
PALLD-209ENST00000507735 RBM19Q9Y4C8 960 aaKnown RBP17.37■□□□□ 0.37
PALLD-209ENST00000507735 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
PALLD-209ENST00000507735 WRNQ14191 1432 aaPredicted RBP eCLIP17.33■□□□□ 0.36
PALLD-209ENST00000507735 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
PALLD-209ENST00000507735 EEA1Q15075 1411 aa17.28■□□□□ 0.36
PALLD-209ENST00000507735 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
PALLD-209ENST00000507735 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
PALLD-209ENST00000507735 GOLGA3Q08378 1498 aa17.21■□□□□ 0.35
PALLD-209ENST00000507735 ANP32AP39687 249 aaKnown RBP17.2■□□□□ 0.34
PALLD-209ENST00000507735 CLIP1P30622 1438 aa17.17■□□□□ 0.34
PALLD-209ENST00000507735 NBR1Q14596 966 aa17.15■□□□□ 0.34
PALLD-209ENST00000507735 DEKP35659 375 aaKnown RBP17.15■□□□□ 0.34
PALLD-209ENST00000507735 P3H3Q8IVL6 736 aa17.15■□□□□ 0.34
PALLD-209ENST00000507735 ARID3CA6NKF2 412 aa17.14■□□□□ 0.34
PALLD-209ENST00000507735 BAZ1BQ9UIG0 1483 aaKnown RBP17.13■□□□□ 0.33
PALLD-209ENST00000507735 HNRNPUQ00839 825 aaKnown RBP eCLIP17.12■□□□□ 0.33
PALLD-209ENST00000507735 DAXXQ9UER7 740 aaPredicted RBP17.1■□□□□ 0.33
PALLD-209ENST00000507735 PRKCSHP14314 528 aaPredicted RBP17.06■□□□□ 0.32
PALLD-209ENST00000507735 FANCIQ9NVI1 1328 aa17.05■□□□□ 0.32
PALLD-209ENST00000507735 ZBTB47Q9UFB7 747 aaPredicted RBP17.03■□□□□ 0.32
PALLD-209ENST00000507735 IRX6P78412 446 aaPredicted RBP17.03■□□□□ 0.32
PALLD-209ENST00000507735 NOP58Q9Y2X3 529 aaKnown RBP17.02■□□□□ 0.32
PALLD-209ENST00000507735 CCER2I3L3R5 266 aa17.02■□□□□ 0.31
PALLD-209ENST00000507735 FAM50AQ14320 339 aaKnown RBP17.01■□□□□ 0.31
PALLD-209ENST00000507735 CEP164Q9UPV0 1460 aa17■□□□□ 0.31
PALLD-209ENST00000507735 BAZ1AQ9NRL2 1556 aaPredicted RBP17■□□□□ 0.31
PALLD-209ENST00000507735 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
PALLD-209ENST00000507735 ERICH6BQ5W0A0 696 aa16.98■□□□□ 0.31
PALLD-209ENST00000507735 PPP4R2Q9NY27 417 aa16.98■□□□□ 0.31
PALLD-209ENST00000507735 SOGA1O94964 1423 aa16.98■□□□□ 0.31
PALLD-209ENST00000507735 EIF5BO60841 1220 aaKnown RBP16.98■□□□□ 0.31
PALLD-209ENST00000507735 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
PALLD-209ENST00000507735 DHX57Q6P158 1386 aaKnown RBP16.93■□□□□ 0.3
PALLD-209ENST00000507735 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
PALLD-209ENST00000507735 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
PALLD-209ENST00000507735 KCNH8Q96L42 1107 aa16.91■□□□□ 0.3
PALLD-209ENST00000507735 TONSLQ96HA7 1378 aa16.91■□□□□ 0.3
PALLD-209ENST00000507735 CHMP7Q8WUX9 453 aaPredicted RBP16.88■□□□□ 0.29
PALLD-209ENST00000507735 CCDC136Q96JN2 1154 aa16.87■□□□□ 0.29
PALLD-209ENST00000507735 NPM2Q86SE8 214 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 300.3 ms