RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
AP001960.1-201ENST00000506494 NBR1Q14596 966 aa13.21□□□□□ -0.29
AP001960.1-201ENST00000506494 DCAF8Q5TAQ9 597 aa13.13□□□□□ -0.31
AP001960.1-201ENST00000506494 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
AP001960.1-201ENST00000506494 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
AP001960.1-201ENST00000506494 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
AP001960.1-201ENST00000506494 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
AP001960.1-201ENST00000506494 NUBP1P53384 320 aa13.09□□□□□ -0.31
AP001960.1-201ENST00000506494 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
AP001960.1-201ENST00000506494 FAM212AQ96EL1 285 aa13.06□□□□□ -0.32
AP001960.1-201ENST00000506494 STK25O00506 426 aa13.03□□□□□ -0.32
AP001960.1-201ENST00000506494 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
AP001960.1-201ENST00000506494 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
AP001960.1-201ENST00000506494 GTPBP6O43824 516 aaPredicted RBP12.98□□□□□ -0.33
AP001960.1-201ENST00000506494 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
AP001960.1-201ENST00000506494 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
AP001960.1-201ENST00000506494 AKT1S1Q96B36 256 aa12.95□□□□□ -0.34
AP001960.1-201ENST00000506494 RYDENQ9NUL5 291 aaKnown RBP12.95□□□□□ -0.34
AP001960.1-201ENST00000506494 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
AP001960.1-201ENST00000506494 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
AP001960.1-201ENST00000506494 STK24Q9Y6E0 443 aa12.91□□□□□ -0.34
AP001960.1-201ENST00000506494 SGIP1Q9BQI5 828 aa12.88□□□□□ -0.35
AP001960.1-201ENST00000506494 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
AP001960.1-201ENST00000506494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.86□□□□□ -0.35
AP001960.1-201ENST00000506494 HAX1O00165 279 aa12.86□□□□□ -0.35
AP001960.1-201ENST00000506494 MNX1P50219 401 aaPredicted RBP12.86□□□□□ -0.35
AP001960.1-201ENST00000506494 RASEFQ8IZ41 740 aa12.86□□□□□ -0.35
AP001960.1-201ENST00000506494 ZFP91Q96JP5 570 aaPredicted RBP12.86□□□□□ -0.35
AP001960.1-201ENST00000506494 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
AP001960.1-201ENST00000506494 PYGBP11216 843 aa12.82□□□□□ -0.36
AP001960.1-201ENST00000506494 REM2Q8IYK8 340 aaPredicted RBP12.8□□□□□ -0.36
AP001960.1-201ENST00000506494 P3H3Q8IVL6 736 aa12.78□□□□□ -0.36
AP001960.1-201ENST00000506494 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
AP001960.1-201ENST00000506494 PITPNM1O00562 1244 aa12.68□□□□□ -0.38
AP001960.1-201ENST00000506494 ZNF467Q7Z7K2 595 aaPredicted RBP12.68□□□□□ -0.38
AP001960.1-201ENST00000506494 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
AP001960.1-201ENST00000506494 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
AP001960.1-201ENST00000506494 GTF3C3Q9Y5Q9 886 aa12.62□□□□□ -0.39
AP001960.1-201ENST00000506494 TULP1O00294 542 aaPredicted RBP12.59□□□□□ -0.39
AP001960.1-201ENST00000506494 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
AP001960.1-201ENST00000506494 ERICH6Q7L0X2 663 aa12.58□□□□□ -0.4
AP001960.1-201ENST00000506494 KCNV2Q8TDN2 545 aa12.57□□□□□ -0.4
AP001960.1-201ENST00000506494 TMEM132AQ24JP5 1023 aa12.56□□□□□ -0.4
AP001960.1-201ENST00000506494 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
AP001960.1-201ENST00000506494 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
AP001960.1-201ENST00000506494 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
AP001960.1-201ENST00000506494 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
AP001960.1-201ENST00000506494 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
AP001960.1-201ENST00000506494 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
AP001960.1-201ENST00000506494 PSEN1P49768 467 aa12.51□□□□□ -0.41
AP001960.1-201ENST00000506494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
AP001960.1-201ENST00000506494 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
AP001960.1-201ENST00000506494 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
AP001960.1-201ENST00000506494 MFRPQ9BY79 579 aa12.47□□□□□ -0.41
AP001960.1-201ENST00000506494 EVX2Q03828 476 aa12.46□□□□□ -0.41
AP001960.1-201ENST00000506494 ARHGEF1Q92888 912 aaKnown RBP12.43□□□□□ -0.42
AP001960.1-201ENST00000506494 CCDC61Q9Y6R9 512 aa12.43□□□□□ -0.42
AP001960.1-201ENST00000506494 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
AP001960.1-201ENST00000506494 NLRP6P59044 892 aa12.41□□□□□ -0.42
AP001960.1-201ENST00000506494 E2F4Q16254 413 aa12.4□□□□□ -0.42
AP001960.1-201ENST00000506494 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
AP001960.1-201ENST00000506494 SOX12O15370 315 aa12.37□□□□□ -0.43
AP001960.1-201ENST00000506494 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
AP001960.1-201ENST00000506494 CABP2Q9NPB3 220 aa12.36□□□□□ -0.43
AP001960.1-201ENST00000506494 PPP1R37O75864 691 aa12.35□□□□□ -0.43
AP001960.1-201ENST00000506494 IFNL1Q8IU54 200 aa12.33□□□□□ -0.44
AP001960.1-201ENST00000506494 FBXO22Q8NEZ5 403 aa12.33□□□□□ -0.44
AP001960.1-201ENST00000506494 C14orf37Q86TY3 774 aa12.32□□□□□ -0.44
AP001960.1-201ENST00000506494 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
AP001960.1-201ENST00000506494 ZC3H15Q8WU90 426 aaKnown RBP12.31□□□□□ -0.44
AP001960.1-201ENST00000506494 LHX8Q68G74 356 aa12.3□□□□□ -0.44
AP001960.1-201ENST00000506494 BRPF1P55201 1214 aaPredicted RBP12.29□□□□□ -0.44
AP001960.1-201ENST00000506494 TESPA1A2RU30 521 aaPredicted RBP12.28□□□□□ -0.44
AP001960.1-201ENST00000506494 SEMA3EO15041 775 aa12.28□□□□□ -0.44
AP001960.1-201ENST00000506494 MAP3K13O43283 966 aa12.28□□□□□ -0.44
AP001960.1-201ENST00000506494 SMYD5Q6GMV2 418 aa12.28□□□□□ -0.44
AP001960.1-201ENST00000506494 PDE4AP27815 886 aa12.26□□□□□ -0.45
AP001960.1-201ENST00000506494 NEUROD2Q15784 382 aa12.26□□□□□ -0.45
AP001960.1-201ENST00000506494 KIF12Q96FN5 646 aa12.25□□□□□ -0.45
AP001960.1-201ENST00000506494 LARP6Q9BRS8 491 aaKnown RBP12.24□□□□□ -0.45
AP001960.1-201ENST00000506494 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
AP001960.1-201ENST00000506494 GABBR2O75899 941 aa12.23□□□□□ -0.45
AP001960.1-201ENST00000506494 ARXQ96QS3 562 aa12.23□□□□□ -0.45
AP001960.1-201ENST00000506494 SLC24A3Q9HC58 644 aa12.22□□□□□ -0.45
AP001960.1-201ENST00000506494 GOLGA2Q08379 1002 aa12.21□□□□□ -0.45
AP001960.1-201ENST00000506494 NCKAP5LQ9HCH0 1330 aa12.2□□□□□ -0.46
AP001960.1-201ENST00000506494 PLSCR2Q9NRY7 297 aa12.19□□□□□ -0.46
AP001960.1-201ENST00000506494 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
AP001960.1-201ENST00000506494 MFSD10Q14728 455 aa12.16□□□□□ -0.46
AP001960.1-201ENST00000506494 ZMYND10O75800 440 aa12.13□□□□□ -0.47
AP001960.1-201ENST00000506494 CRISPLD2Q9H0B8 497 aa12.13□□□□□ -0.47
AP001960.1-201ENST00000506494 ZRANB1Q9UGI0 708 aa12.13□□□□□ -0.47
AP001960.1-201ENST00000506494 ARIH1Q9Y4X5 557 aaPredicted RBP12.13□□□□□ -0.47
AP001960.1-201ENST00000506494 MS4A4AQ96JQ5 239 aa12.12□□□□□ -0.47
AP001960.1-201ENST00000506494 MKRN3Q13064 507 aaKnown RBP12.09□□□□□ -0.47
AP001960.1-201ENST00000506494 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
AP001960.1-201ENST00000506494 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
AP001960.1-201ENST00000506494 CAMK2BQ13554 666 aa12.07□□□□□ -0.48
AP001960.1-201ENST00000506494 BARGINQ6ZT62 677 aa12.06□□□□□ -0.48
AP001960.1-201ENST00000506494 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms