RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
AP001960.1-201ENST00000506494 NBR1Q14596 966 aa13.21□□□□□ -0.29
AP001960.1-201ENST00000506494 DCAF8Q5TAQ9 597 aa13.13□□□□□ -0.31
AP001960.1-201ENST00000506494 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
AP001960.1-201ENST00000506494 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
AP001960.1-201ENST00000506494 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
AP001960.1-201ENST00000506494 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
AP001960.1-201ENST00000506494 NUBP1P53384 320 aa13.09□□□□□ -0.31
AP001960.1-201ENST00000506494 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
AP001960.1-201ENST00000506494 FAM212AQ96EL1 285 aa13.06□□□□□ -0.32
AP001960.1-201ENST00000506494 STK25O00506 426 aa13.03□□□□□ -0.32
AP001960.1-201ENST00000506494 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
AP001960.1-201ENST00000506494 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
AP001960.1-201ENST00000506494 GTPBP6O43824 516 aaPredicted RBP12.98□□□□□ -0.33
AP001960.1-201ENST00000506494 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
AP001960.1-201ENST00000506494 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
AP001960.1-201ENST00000506494 AKT1S1Q96B36 256 aa12.95□□□□□ -0.34
AP001960.1-201ENST00000506494 RYDENQ9NUL5 291 aaKnown RBP12.95□□□□□ -0.34
AP001960.1-201ENST00000506494 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
AP001960.1-201ENST00000506494 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
AP001960.1-201ENST00000506494 STK24Q9Y6E0 443 aa12.91□□□□□ -0.34
AP001960.1-201ENST00000506494 SGIP1Q9BQI5 828 aa12.88□□□□□ -0.35
AP001960.1-201ENST00000506494 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
AP001960.1-201ENST00000506494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.86□□□□□ -0.35
AP001960.1-201ENST00000506494 HAX1O00165 279 aa12.86□□□□□ -0.35
AP001960.1-201ENST00000506494 MNX1P50219 401 aaPredicted RBP12.86□□□□□ -0.35
AP001960.1-201ENST00000506494 RASEFQ8IZ41 740 aa12.86□□□□□ -0.35
AP001960.1-201ENST00000506494 ZFP91Q96JP5 570 aaPredicted RBP12.86□□□□□ -0.35
AP001960.1-201ENST00000506494 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
AP001960.1-201ENST00000506494 PYGBP11216 843 aa12.82□□□□□ -0.36
AP001960.1-201ENST00000506494 REM2Q8IYK8 340 aaPredicted RBP12.8□□□□□ -0.36
AP001960.1-201ENST00000506494 P3H3Q8IVL6 736 aa12.78□□□□□ -0.36
AP001960.1-201ENST00000506494 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
AP001960.1-201ENST00000506494 PITPNM1O00562 1244 aa12.68□□□□□ -0.38
AP001960.1-201ENST00000506494 ZNF467Q7Z7K2 595 aaPredicted RBP12.68□□□□□ -0.38
AP001960.1-201ENST00000506494 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
AP001960.1-201ENST00000506494 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
AP001960.1-201ENST00000506494 GTF3C3Q9Y5Q9 886 aa12.62□□□□□ -0.39
AP001960.1-201ENST00000506494 TULP1O00294 542 aaPredicted RBP12.59□□□□□ -0.39
AP001960.1-201ENST00000506494 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
AP001960.1-201ENST00000506494 ERICH6Q7L0X2 663 aa12.58□□□□□ -0.4
AP001960.1-201ENST00000506494 KCNV2Q8TDN2 545 aa12.57□□□□□ -0.4
AP001960.1-201ENST00000506494 TMEM132AQ24JP5 1023 aa12.56□□□□□ -0.4
AP001960.1-201ENST00000506494 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
AP001960.1-201ENST00000506494 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
AP001960.1-201ENST00000506494 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
AP001960.1-201ENST00000506494 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
AP001960.1-201ENST00000506494 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
AP001960.1-201ENST00000506494 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
AP001960.1-201ENST00000506494 PSEN1P49768 467 aa12.51□□□□□ -0.41
AP001960.1-201ENST00000506494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
AP001960.1-201ENST00000506494 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
AP001960.1-201ENST00000506494 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
AP001960.1-201ENST00000506494 MFRPQ9BY79 579 aa12.47□□□□□ -0.41
AP001960.1-201ENST00000506494 EVX2Q03828 476 aa12.46□□□□□ -0.41
AP001960.1-201ENST00000506494 ARHGEF1Q92888 912 aaKnown RBP12.43□□□□□ -0.42
AP001960.1-201ENST00000506494 CCDC61Q9Y6R9 512 aa12.43□□□□□ -0.42
AP001960.1-201ENST00000506494 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
AP001960.1-201ENST00000506494 NLRP6P59044 892 aa12.41□□□□□ -0.42
AP001960.1-201ENST00000506494 E2F4Q16254 413 aa12.4□□□□□ -0.42
AP001960.1-201ENST00000506494 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
AP001960.1-201ENST00000506494 SOX12O15370 315 aa12.37□□□□□ -0.43
AP001960.1-201ENST00000506494 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
AP001960.1-201ENST00000506494 CABP2Q9NPB3 220 aa12.36□□□□□ -0.43
AP001960.1-201ENST00000506494 PPP1R37O75864 691 aa12.35□□□□□ -0.43
AP001960.1-201ENST00000506494 IFNL1Q8IU54 200 aa12.33□□□□□ -0.44
AP001960.1-201ENST00000506494 FBXO22Q8NEZ5 403 aa12.33□□□□□ -0.44
AP001960.1-201ENST00000506494 C14orf37Q86TY3 774 aa12.32□□□□□ -0.44
AP001960.1-201ENST00000506494 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
AP001960.1-201ENST00000506494 ZC3H15Q8WU90 426 aaKnown RBP12.31□□□□□ -0.44
AP001960.1-201ENST00000506494 LHX8Q68G74 356 aa12.3□□□□□ -0.44
AP001960.1-201ENST00000506494 BRPF1P55201 1214 aaPredicted RBP12.29□□□□□ -0.44
AP001960.1-201ENST00000506494 TESPA1A2RU30 521 aaPredicted RBP12.28□□□□□ -0.44
AP001960.1-201ENST00000506494 SEMA3EO15041 775 aa12.28□□□□□ -0.44
AP001960.1-201ENST00000506494 MAP3K13O43283 966 aa12.28□□□□□ -0.44
AP001960.1-201ENST00000506494 SMYD5Q6GMV2 418 aa12.28□□□□□ -0.44
AP001960.1-201ENST00000506494 PDE4AP27815 886 aa12.26□□□□□ -0.45
AP001960.1-201ENST00000506494 NEUROD2Q15784 382 aa12.26□□□□□ -0.45
AP001960.1-201ENST00000506494 KIF12Q96FN5 646 aa12.25□□□□□ -0.45
AP001960.1-201ENST00000506494 LARP6Q9BRS8 491 aaKnown RBP12.24□□□□□ -0.45
AP001960.1-201ENST00000506494 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
AP001960.1-201ENST00000506494 GABBR2O75899 941 aa12.23□□□□□ -0.45
AP001960.1-201ENST00000506494 ARXQ96QS3 562 aa12.23□□□□□ -0.45
AP001960.1-201ENST00000506494 SLC24A3Q9HC58 644 aa12.22□□□□□ -0.45
AP001960.1-201ENST00000506494 GOLGA2Q08379 1002 aa12.21□□□□□ -0.45
AP001960.1-201ENST00000506494 NCKAP5LQ9HCH0 1330 aa12.2□□□□□ -0.46
AP001960.1-201ENST00000506494 PLSCR2Q9NRY7 297 aa12.19□□□□□ -0.46
AP001960.1-201ENST00000506494 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
AP001960.1-201ENST00000506494 MFSD10Q14728 455 aa12.16□□□□□ -0.46
AP001960.1-201ENST00000506494 ZMYND10O75800 440 aa12.13□□□□□ -0.47
AP001960.1-201ENST00000506494 CRISPLD2Q9H0B8 497 aa12.13□□□□□ -0.47
AP001960.1-201ENST00000506494 ZRANB1Q9UGI0 708 aa12.13□□□□□ -0.47
AP001960.1-201ENST00000506494 ARIH1Q9Y4X5 557 aaPredicted RBP12.13□□□□□ -0.47
AP001960.1-201ENST00000506494 MS4A4AQ96JQ5 239 aa12.12□□□□□ -0.47
AP001960.1-201ENST00000506494 MKRN3Q13064 507 aaKnown RBP12.09□□□□□ -0.47
AP001960.1-201ENST00000506494 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
AP001960.1-201ENST00000506494 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
AP001960.1-201ENST00000506494 CAMK2BQ13554 666 aa12.07□□□□□ -0.48
AP001960.1-201ENST00000506494 BARGINQ6ZT62 677 aa12.06□□□□□ -0.48
AP001960.1-201ENST00000506494 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms