RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 NESP48681 1621 aa3.81□□□□□ -1.8
NEDD4-205ENST00000506154 EIF4G3O43432 1585 aaKnown RBP3.81□□□□□ -1.8
NEDD4-205ENST00000506154 NCBP3Q53F19 620 aaKnown RBP3.81□□□□□ -1.8
NEDD4-205ENST00000506154 KDM5BQ9UGL1 1544 aa3.8□□□□□ -1.8
NEDD4-205ENST00000506154 SUPT5HO00267 1087 aaKnown RBP3.8□□□□□ -1.8
NEDD4-205ENST00000506154 TAOK2Q9UL54 1235 aa3.8□□□□□ -1.8
NEDD4-205ENST00000506154 ATF5Q9Y2D1 282 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-205ENST00000506154 MRC2Q9UBG0 1479 aa3.79□□□□□ -1.8
NEDD4-205ENST00000506154 NUP160Q12769 1436 aa3.79□□□□□ -1.8
NEDD4-205ENST00000506154 FOXD4L1Q9NU39 408 aa3.78□□□□□ -1.8
NEDD4-205ENST00000506154 FANCD2Q9BXW9 1451 aa3.78□□□□□ -1.8
NEDD4-205ENST00000506154 CTTNBP2Q8WZ74 1663 aa3.77□□□□□ -1.81
NEDD4-205ENST00000506154 PAXIP1Q6ZW49 1069 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-205ENST00000506154 MAP3K1Q13233 1512 aa3.77□□□□□ -1.81
NEDD4-205ENST00000506154 SCAF1Q9H7N4 1312 aaKnown RBP3.76□□□□□ -1.81
NEDD4-205ENST00000506154 ADCY10Q96PN6 1610 aa3.76□□□□□ -1.81
NEDD4-205ENST00000506154 UGGT2Q9NYU1 1516 aa3.76□□□□□ -1.81
NEDD4-205ENST00000506154 CEP170Q5SW79 1584 aa3.75□□□□□ -1.81
NEDD4-205ENST00000506154 ERICH6Q7L0X2 663 aa3.75□□□□□ -1.81
NEDD4-205ENST00000506154 WRNQ14191 1432 aaPredicted RBP eCLIP3.75□□□□□ -1.81
NEDD4-205ENST00000506154 FGD5Q6ZNL6 1462 aa3.75□□□□□ -1.81
NEDD4-205ENST00000506154 EEA1Q15075 1411 aa3.75□□□□□ -1.81
NEDD4-205ENST00000506154 SNAPC4Q5SXM2 1469 aa3.75□□□□□ -1.81
NEDD4-205ENST00000506154 CFAP43Q8NDM7 1665 aa3.75□□□□□ -1.81
NEDD4-205ENST00000506154 IFT140Q96RY7 1462 aa3.74□□□□□ -1.81
NEDD4-205ENST00000506154 FAM9AQ8IZU1 332 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-205ENST00000506154 BCORL1Q5H9F3 1711 aa3.74□□□□□ -1.81
NEDD4-205ENST00000506154 PLCB2Q00722 1185 aa3.73□□□□□ -1.81
NEDD4-205ENST00000506154 AQRO60306 1485 aaKnown RBP eCLIP3.73□□□□□ -1.81
NEDD4-205ENST00000506154 BCL11AQ9H165 835 aa3.73□□□□□ -1.81
NEDD4-205ENST00000506154 DISP1Q96F81 1524 aa3.73□□□□□ -1.81
NEDD4-205ENST00000506154 MAGI1Q96QZ7 1491 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-205ENST00000506154 CEP164Q9UPV0 1460 aa3.72□□□□□ -1.81
NEDD4-205ENST00000506154 ABCA8O94911 1581 aa3.72□□□□□ -1.81
NEDD4-205ENST00000506154 KDM2AQ9Y2K7 1162 aa3.71□□□□□ -1.82
NEDD4-205ENST00000506154 IQGAP2Q13576 1575 aa3.71□□□□□ -1.82
NEDD4-205ENST00000506154 CHD1O14646 1710 aa3.7□□□□□ -1.82
NEDD4-205ENST00000506154 SLC4A2P04920 1241 aa3.7□□□□□ -1.82
NEDD4-205ENST00000506154 IGF1RP08069 1367 aa3.7□□□□□ -1.82
NEDD4-205ENST00000506154 EFCAB5A4FU69 1503 aa3.7□□□□□ -1.82
NEDD4-205ENST00000506154 ZNF608Q9ULD9 1512 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-205ENST00000506154 PPRC1Q5VV67 1664 aaKnown RBP3.7□□□□□ -1.82
NEDD4-205ENST00000506154 PDS5BQ9NTI5 1447 aa3.69□□□□□ -1.82
NEDD4-205ENST00000506154 KIAA0556O60303 1618 aa3.69□□□□□ -1.82
NEDD4-205ENST00000506154 UHRF1BP1LA0JNW5 1464 aa3.68□□□□□ -1.82
NEDD4-205ENST00000506154 ARAP1Q96P48 1450 aa3.68□□□□□ -1.82
NEDD4-205ENST00000506154 GRIN2BQ13224 1484 aa3.68□□□□□ -1.82
NEDD4-205ENST00000506154 C14orf37Q86TY3 774 aa3.68□□□□□ -1.82
NEDD4-205ENST00000506154 PABPN1Q86U42 306 aaKnown RBP eCLIP3.68□□□□□ -1.82
NEDD4-205ENST00000506154 ARAP3Q8WWN8 1544 aa3.67□□□□□ -1.82
NEDD4-205ENST00000506154 BCANQ96GW7 911 aa3.67□□□□□ -1.82
NEDD4-205ENST00000506154 SOGA1O94964 1423 aa3.67□□□□□ -1.82
NEDD4-205ENST00000506154 TRHP20396 242 aaPredicted RBP3.67□□□□□ -1.82
NEDD4-205ENST00000506154 MAGI3Q5TCQ9 1506 aa3.67□□□□□ -1.82
NEDD4-205ENST00000506154 GRIN2AQ12879 1464 aa3.66□□□□□ -1.82
NEDD4-205ENST00000506154 KLHL34Q8N239 644 aa3.66□□□□□ -1.82
NEDD4-205ENST00000506154 CNKSR2Q8WXI2 1034 aa3.66□□□□□ -1.82
NEDD4-205ENST00000506154 TSHZ2Q9NRE2 1034 aa3.66□□□□□ -1.82
NEDD4-205ENST00000506154 SYNJ2O15056 1496 aa3.66□□□□□ -1.82
NEDD4-205ENST00000506154 RAD54L2Q9Y4B4 1467 aa3.65□□□□□ -1.83
NEDD4-205ENST00000506154 GLI2P10070 1586 aa3.64□□□□□ -1.83
NEDD4-205ENST00000506154 ARHGAP35Q9NRY4 1499 aa3.64□□□□□ -1.83
NEDD4-205ENST00000506154 CROCC2H7BZ55 1655 aa3.64□□□□□ -1.83
NEDD4-205ENST00000506154 NPM1P06748 294 aaKnown RBP eCLIP3.64□□□□□ -1.83
NEDD4-205ENST00000506154 PODXL2Q9NZ53 605 aa3.64□□□□□ -1.83
NEDD4-205ENST00000506154 FHAD1B1AJZ9 1412 aa3.64□□□□□ -1.83
NEDD4-205ENST00000506154 KIAA0586Q9BVV6 1533 aa3.63□□□□□ -1.83
NEDD4-205ENST00000506154 RAPGEF2Q9Y4G8 1499 aa3.63□□□□□ -1.83
NEDD4-205ENST00000506154 ABCA9Q8IUA7 1624 aa3.63□□□□□ -1.83
NEDD4-205ENST00000506154 ERCC6L2Q5T890 1561 aa3.63□□□□□ -1.83
NEDD4-205ENST00000506154 ABCC10Q5T3U5 1492 aa3.63□□□□□ -1.83
NEDD4-205ENST00000506154 MAPKBP1O60336 1514 aa3.63□□□□□ -1.83
NEDD4-205ENST00000506154 GTF3C3Q9Y5Q9 886 aa3.62□□□□□ -1.83
NEDD4-205ENST00000506154 TCOF1Q13428 1488 aaKnown RBP3.62□□□□□ -1.83
NEDD4-205ENST00000506154 VWDEQ8N2E2 1590 aa3.62□□□□□ -1.83
NEDD4-205ENST00000506154 MAST1Q9Y2H9 1570 aa3.62□□□□□ -1.83
NEDD4-205ENST00000506154 MAGI2Q86UL8 1455 aa3.62□□□□□ -1.83
NEDD4-205ENST00000506154 MAP3K4Q9Y6R4 1608 aa3.62□□□□□ -1.83
NEDD4-205ENST00000506154 REREQ9P2R6 1566 aa3.62□□□□□ -1.83
NEDD4-205ENST00000506154 TNIKQ9UKE5 1360 aa3.62□□□□□ -1.83
NEDD4-205ENST00000506154 GAPVD1Q14C86 1478 aa3.61□□□□□ -1.83
NEDD4-205ENST00000506154 FRMPD1Q5SYB0 1578 aa3.61□□□□□ -1.83
NEDD4-205ENST00000506154 IFNLR1Q8IU57 520 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-205ENST00000506154 DEPDC5O75140 1603 aa3.61□□□□□ -1.83
NEDD4-205ENST00000506154 CIZ1Q9ULV3 898 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-205ENST00000506154 NEURL4Q96JN8 1562 aa3.61□□□□□ -1.83
NEDD4-205ENST00000506154 SIGLEC1Q9BZZ2 1709 aa3.6□□□□□ -1.83
NEDD4-205ENST00000506154 UBE2Q2Q8WVN8 375 aa3.6□□□□□ -1.83
NEDD4-205ENST00000506154 DENND4BO75064 1496 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-205ENST00000506154 PCF11O94913 1555 aaKnown RBP3.6□□□□□ -1.83
NEDD4-205ENST00000506154 TIAM1Q13009 1591 aa3.6□□□□□ -1.83
NEDD4-205ENST00000506154 ECM2O94769 699 aaPredicted RBP3.59□□□□□ -1.83
NEDD4-205ENST00000506154 PLXNC1O60486 1568 aa3.59□□□□□ -1.83
NEDD4-205ENST00000506154 CDC42BPAQ5VT25 1732 aa3.59□□□□□ -1.83
NEDD4-205ENST00000506154 ARID3CA6NKF2 412 aa3.59□□□□□ -1.83
NEDD4-205ENST00000506154 CHGAP10645 457 aaKnown RBP3.59□□□□□ -1.83
NEDD4-205ENST00000506154 MROH1Q8NDA8 1641 aa3.59□□□□□ -1.83
NEDD4-205ENST00000506154 KDM5CP41229 1560 aa3.59□□□□□ -1.84
NEDD4-205ENST00000506154 NUP153P49790 1475 aaKnown RBP3.59□□□□□ -1.84
NEDD4-205ENST00000506154 NBR1Q14596 966 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms