RNA–Protein interactions for RNA: ENST00000505712.5

LINC01339-201, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 2 BASIC

Gene LINC01339, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-201ENST00000505712 CCDC61Q9Y6R9 512 aa13.32□□□□□ -0.28
LINC01339-201ENST00000505712 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
LINC01339-201ENST00000505712 NUBP1P53384 320 aa13.25□□□□□ -0.29
LINC01339-201ENST00000505712 LHX8Q68G74 356 aa13.24□□□□□ -0.29
LINC01339-201ENST00000505712 VASPP50552 380 aaPredicted RBP13.23□□□□□ -0.29
LINC01339-201ENST00000505712 KIF12Q96FN5 646 aa13.23□□□□□ -0.29
LINC01339-201ENST00000505712 FAM212AQ96EL1 285 aa13.21□□□□□ -0.29
LINC01339-201ENST00000505712 MAP3K13O43283 966 aa13.15□□□□□ -0.3
LINC01339-201ENST00000505712 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
LINC01339-201ENST00000505712 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
LINC01339-201ENST00000505712 ATMINO43313 823 aaPredicted RBP13.11□□□□□ -0.31
LINC01339-201ENST00000505712 SGIP1Q9BQI5 828 aa13.11□□□□□ -0.31
LINC01339-201ENST00000505712 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
LINC01339-201ENST00000505712 PELP1Q8IZL8 1130 aaKnown RBP13.08□□□□□ -0.32
LINC01339-201ENST00000505712 PCDHB13Q9Y5F0 798 aa13.08□□□□□ -0.32
LINC01339-201ENST00000505712 SLC39A7Q92504 469 aa13.06□□□□□ -0.32
LINC01339-201ENST00000505712 TIE1P35590 1138 aa13.05□□□□□ -0.32
LINC01339-201ENST00000505712 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
LINC01339-201ENST00000505712 C7P10643 843 aa13.03□□□□□ -0.32
LINC01339-201ENST00000505712 METRNQ9UJH8 293 aa13.03□□□□□ -0.32
LINC01339-201ENST00000505712 TRPC6Q9Y210 931 aa13.03□□□□□ -0.32
LINC01339-201ENST00000505712 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
LINC01339-201ENST00000505712 GSE1Q14687 1217 aa13.01□□□□□ -0.33
LINC01339-201ENST00000505712 IFNL1Q8IU54 200 aa12.99□□□□□ -0.33
LINC01339-201ENST00000505712 PYGBP11216 843 aa12.97□□□□□ -0.33
LINC01339-201ENST00000505712 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
LINC01339-201ENST00000505712 TTLL13PA6NNM8 815 aa12.96□□□□□ -0.33
LINC01339-201ENST00000505712 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
LINC01339-201ENST00000505712 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
LINC01339-201ENST00000505712 TMEM106CQ9BVX2 250 aa12.89□□□□□ -0.35
LINC01339-201ENST00000505712 TRIM35Q9UPQ4 493 aa12.88□□□□□ -0.35
LINC01339-201ENST00000505712 CHRM1P11229 460 aaPredicted RBP12.86□□□□□ -0.35
LINC01339-201ENST00000505712 IER5LQ5T953 404 aa12.86□□□□□ -0.35
LINC01339-201ENST00000505712 OTUD5Q96G74 571 aa12.86□□□□□ -0.35
LINC01339-201ENST00000505712 ZNF467Q7Z7K2 595 aaPredicted RBP12.85□□□□□ -0.35
LINC01339-201ENST00000505712 PCDHB8Q9UN66 801 aa12.85□□□□□ -0.35
LINC01339-201ENST00000505712 SEC24BO95487 1268 aa12.84□□□□□ -0.35
LINC01339-201ENST00000505712 CIZ1Q9ULV3 898 aaPredicted RBP12.84□□□□□ -0.35
LINC01339-201ENST00000505712 MAMSTRQ6ZN01 415 aa12.83□□□□□ -0.36
LINC01339-201ENST00000505712 POTEFA5A3E0 1075 aa12.8□□□□□ -0.36
LINC01339-201ENST00000505712 POTEJP0CG39 1038 aa12.77□□□□□ -0.37
LINC01339-201ENST00000505712 COLQQ9Y215 455 aaPredicted RBP12.77□□□□□ -0.37
LINC01339-201ENST00000505712 SCUBE2Q9NQ36 999 aa12.76□□□□□ -0.37
LINC01339-201ENST00000505712 TRIM41Q8WV44 630 aa12.73□□□□□ -0.37
LINC01339-201ENST00000505712 PLCG2P16885 1265 aa12.72□□□□□ -0.37
LINC01339-201ENST00000505712 PSEN1P49768 467 aa12.69□□□□□ -0.38
LINC01339-201ENST00000505712 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
LINC01339-201ENST00000505712 GOLGA2Q08379 1002 aa12.68□□□□□ -0.38
LINC01339-201ENST00000505712 PDAP1Q13442 181 aaKnown RBP12.68□□□□□ -0.38
LINC01339-201ENST00000505712 OCEL1Q9H607 264 aa12.66□□□□□ -0.38
LINC01339-201ENST00000505712 MKRN3Q13064 507 aaKnown RBP12.63□□□□□ -0.39
LINC01339-201ENST00000505712 CABP2Q9NPB3 220 aa12.54□□□□□ -0.4
LINC01339-201ENST00000505712 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC01339-201ENST00000505712 PDCD7Q8N8D1 485 aaKnown RBP12.53□□□□□ -0.4
LINC01339-201ENST00000505712 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
LINC01339-201ENST00000505712 SLAIN1Q8ND83 568 aa12.5□□□□□ -0.41
LINC01339-201ENST00000505712 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
LINC01339-201ENST00000505712 RNF25Q96BH1 459 aaPredicted RBP12.47□□□□□ -0.41
LINC01339-201ENST00000505712 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
LINC01339-201ENST00000505712 ILDR1Q86SU0 546 aaPredicted RBP12.46□□□□□ -0.41
LINC01339-201ENST00000505712 POTEMA6NI47 508 aa12.45□□□□□ -0.42
LINC01339-201ENST00000505712 VGFO15240 615 aaPredicted RBP12.45□□□□□ -0.42
LINC01339-201ENST00000505712 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
LINC01339-201ENST00000505712 POTEGQ6S5H5 508 aa12.43□□□□□ -0.42
LINC01339-201ENST00000505712 C3orf67Q6ZVT6 689 aa12.43□□□□□ -0.42
LINC01339-201ENST00000505712 TAOK2Q9UL54 1235 aa12.42□□□□□ -0.42
LINC01339-201ENST00000505712 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.4□□□□□ -0.42
LINC01339-201ENST00000505712 EFCAB3Q8N7B9 438 aa12.4□□□□□ -0.42
LINC01339-201ENST00000505712 ZFP91Q96JP5 570 aaPredicted RBP12.4□□□□□ -0.42
LINC01339-201ENST00000505712 LCE2DQ5TA82 110 aaPredicted RBP12.39□□□□□ -0.43
LINC01339-201ENST00000505712 G3V3G9 751 aa12.38□□□□□ -0.43
LINC01339-201ENST00000505712 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
LINC01339-201ENST00000505712 DPY19L2Q6NUT2 758 aa12.36□□□□□ -0.43
LINC01339-201ENST00000505712 SNPHO15079 494 aa12.34□□□□□ -0.43
LINC01339-201ENST00000505712 BOLA1Q9Y3E2 137 aa12.34□□□□□ -0.43
LINC01339-201ENST00000505712 SOX12O15370 315 aa12.33□□□□□ -0.44
LINC01339-201ENST00000505712 PKD2Q13563 968 aa12.32□□□□□ -0.44
LINC01339-201ENST00000505712 BCL11BQ9C0K0 894 aaPredicted RBP12.29□□□□□ -0.44
LINC01339-201ENST00000505712 PCDH10Q9P2E7 1040 aa12.29□□□□□ -0.44
LINC01339-201ENST00000505712 ST18O60284 1047 aa12.28□□□□□ -0.44
LINC01339-201ENST00000505712 STK24Q9Y6E0 443 aa12.26□□□□□ -0.45
LINC01339-201ENST00000505712 STK25O00506 426 aa12.25□□□□□ -0.45
LINC01339-201ENST00000505712 RGL2O15211 777 aa12.24□□□□□ -0.45
LINC01339-201ENST00000505712 TMEM121BQ9BXQ6 578 aaPredicted RBP12.24□□□□□ -0.45
LINC01339-201ENST00000505712 PHF8Q9UPP1 1060 aa12.24□□□□□ -0.45
LINC01339-201ENST00000505712 NLRP6P59044 892 aa12.21□□□□□ -0.45
LINC01339-201ENST00000505712 MS4A4AQ96JQ5 239 aa12.21□□□□□ -0.45
LINC01339-201ENST00000505712 PLSCR2Q9NRY7 297 aa12.2□□□□□ -0.46
LINC01339-201ENST00000505712 MICALL2Q8IY33 904 aa12.19□□□□□ -0.46
LINC01339-201ENST00000505712 FBXO22Q8NEZ5 403 aa12.15□□□□□ -0.46
LINC01339-201ENST00000505712 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
LINC01339-201ENST00000505712 CDAN1Q8IWY9 1227 aa12.1□□□□□ -0.47
LINC01339-201ENST00000505712 MARVELD3Q96A59 401 aa12.1□□□□□ -0.47
LINC01339-201ENST00000505712 DOK7Q18PE1 504 aa12.08□□□□□ -0.48
LINC01339-201ENST00000505712 HOXB3P14651 431 aaPredicted RBP12.07□□□□□ -0.48
LINC01339-201ENST00000505712 EMP3P54852 163 aa12.07□□□□□ -0.48
LINC01339-201ENST00000505712 TMEM92Q6UXU6 159 aa12.06□□□□□ -0.48
LINC01339-201ENST00000505712 ZNF710Q8N1W2 664 aa12.06□□□□□ -0.48
LINC01339-201ENST00000505712 RIMBP2O15034 1052 aa12.03□□□□□ -0.48
LINC01339-201ENST00000505712 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms