RNA–Protein interactions for RNA: ENST00000504458.1

SERF1A-204, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4 BASIC

Gene SERF1A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-204ENST00000504458 CD44P16070 742 aaKnown RBP10.6□□□□□ -0.71
SERF1A-204ENST00000504458 SHROOM4Q9ULL8 1493 aa10.6□□□□□ -0.71
SERF1A-204ENST00000504458 PAK3O75914 559 aaPredicted RBP10.59□□□□□ -0.71
SERF1A-204ENST00000504458 MYO15BQ96JP2 1530 aa10.55□□□□□ -0.72
SERF1A-204ENST00000504458 KLHL34Q8N239 644 aa10.55□□□□□ -0.72
SERF1A-204ENST00000504458 SP7Q8TDD2 431 aaPredicted RBP10.55□□□□□ -0.72
SERF1A-204ENST00000504458 EVX2Q03828 476 aa10.53□□□□□ -0.72
SERF1A-204ENST00000504458 ZRANB1Q9UGI0 708 aa10.51□□□□□ -0.73
SERF1A-204ENST00000504458 EIF4G1Q04637 1599 aaKnown RBP10.51□□□□□ -0.73
SERF1A-204ENST00000504458 SCRIBQ14160 1630 aa10.5□□□□□ -0.73
SERF1A-204ENST00000504458 CLCN6P51797 869 aa10.49□□□□□ -0.73
SERF1A-204ENST00000504458 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
SERF1A-204ENST00000504458 NUBP1P53384 320 aa10.47□□□□□ -0.73
SERF1A-204ENST00000504458 ZNF579Q8NAF0 562 aaKnown RBP10.47□□□□□ -0.73
SERF1A-204ENST00000504458 RASEFQ8IZ41 740 aa10.45□□□□□ -0.74
SERF1A-204ENST00000504458 FAM212AQ96EL1 285 aa10.45□□□□□ -0.74
SERF1A-204ENST00000504458 TSPYL2Q9H2G4 693 aaPredicted RBP10.45□□□□□ -0.74
SERF1A-204ENST00000504458 SPOCK2Q92563 424 aa10.44□□□□□ -0.74
SERF1A-204ENST00000504458 SUPT5HO00267 1087 aaKnown RBP10.43□□□□□ -0.74
SERF1A-204ENST00000504458 CCDC61Q9Y6R9 512 aa10.4□□□□□ -0.74
SERF1A-204ENST00000504458 GABBR2O75899 941 aa10.39□□□□□ -0.75
SERF1A-204ENST00000504458 GSE1Q14687 1217 aa10.38□□□□□ -0.75
SERF1A-204ENST00000504458 DCAF8Q5TAQ9 597 aa10.38□□□□□ -0.75
SERF1A-204ENST00000504458 ERCC6Q03468 1493 aa10.37□□□□□ -0.75
SERF1A-204ENST00000504458 TRIM41Q8WV44 630 aa10.36□□□□□ -0.75
SERF1A-204ENST00000504458 PHF12Q96QT6 1004 aa10.36□□□□□ -0.75
SERF1A-204ENST00000504458 KIF12Q96FN5 646 aa10.31□□□□□ -0.76
SERF1A-204ENST00000504458 SGIP1Q9BQI5 828 aa10.3□□□□□ -0.76
SERF1A-204ENST00000504458 CIZ1Q9ULV3 898 aaPredicted RBP10.29□□□□□ -0.76
SERF1A-204ENST00000504458 CUX2O14529 1486 aa10.28□□□□□ -0.76
SERF1A-204ENST00000504458 MAP3K13O43283 966 aa10.26□□□□□ -0.77
SERF1A-204ENST00000504458 GALR2O43603 387 aaPredicted RBP10.26□□□□□ -0.77
SERF1A-204ENST00000504458 MS4A3Q96HJ5 214 aa10.25□□□□□ -0.77
SERF1A-204ENST00000504458 PYGBP11216 843 aa10.24□□□□□ -0.77
SERF1A-204ENST00000504458 CHRM1P11229 460 aaPredicted RBP10.24□□□□□ -0.77
SERF1A-204ENST00000504458 PCDHB13Q9Y5F0 798 aa10.24□□□□□ -0.77
SERF1A-204ENST00000504458 DCBLD2Q96PD2 775 aa10.23□□□□□ -0.77
SERF1A-204ENST00000504458 ZNF467Q7Z7K2 595 aaPredicted RBP10.17□□□□□ -0.78
SERF1A-204ENST00000504458 IFNL1Q8IU54 200 aa10.16□□□□□ -0.78
SERF1A-204ENST00000504458 TIE1P35590 1138 aa10.15□□□□□ -0.78
SERF1A-204ENST00000504458 POTEIP0CG38 1075 aa10.13□□□□□ -0.79
SERF1A-204ENST00000504458 ASTLQ6HA08 431 aaPredicted RBP10.12□□□□□ -0.79
SERF1A-204ENST00000504458 PCDHB8Q9UN66 801 aa10.11□□□□□ -0.79
SERF1A-204ENST00000504458 NCAPD3P42695 1498 aa10.1□□□□□ -0.79
SERF1A-204ENST00000504458 NESP48681 1621 aa10.1□□□□□ -0.79
SERF1A-204ENST00000504458 ATMINO43313 823 aaPredicted RBP10.09□□□□□ -0.79
SERF1A-204ENST00000504458 BMP2KQ9NSY1 1161 aaPredicted RBP10.09□□□□□ -0.79
SERF1A-204ENST00000504458 TRPC6Q9Y210 931 aa10.08□□□□□ -0.8
SERF1A-204ENST00000504458 RSF1Q96T23 1441 aaPredicted RBP10.07□□□□□ -0.8
SERF1A-204ENST00000504458 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
SERF1A-204ENST00000504458 PKD2Q13563 968 aa10.07□□□□□ -0.8
SERF1A-204ENST00000504458 TTLL13PA6NNM8 815 aa10.06□□□□□ -0.8
SERF1A-204ENST00000504458 TMEM106CQ9BVX2 250 aa10.06□□□□□ -0.8
SERF1A-204ENST00000504458 ATAD2BQ9ULI0 1458 aa10.05□□□□□ -0.8
SERF1A-204ENST00000504458 TAOK2Q9UL54 1235 aa10.05□□□□□ -0.8
SERF1A-204ENST00000504458 ATN1P54259 1190 aaPredicted RBP10.04□□□□□ -0.8
SERF1A-204ENST00000504458 PDAP1Q13442 181 aaKnown RBP10.04□□□□□ -0.8
SERF1A-204ENST00000504458 RIOK3O14730 519 aaKnown RBP10.03□□□□□ -0.8
SERF1A-204ENST00000504458 SLC39A7Q92504 469 aa10.03□□□□□ -0.8
SERF1A-204ENST00000504458 PSEN1P49768 467 aa10.02□□□□□ -0.81
SERF1A-204ENST00000504458 C7P10643 843 aa10.01□□□□□ -0.81
SERF1A-204ENST00000504458 TRIM35Q9UPQ4 493 aa10.01□□□□□ -0.81
SERF1A-204ENST00000504458 VGFO15240 615 aaPredicted RBP10□□□□□ -0.81
SERF1A-204ENST00000504458 PELP1Q8IZL8 1130 aaKnown RBP10□□□□□ -0.81
SERF1A-204ENST00000504458 RNF25Q96BH1 459 aaPredicted RBP10□□□□□ -0.81
SERF1A-204ENST00000504458 SMARCA2P51531 1590 aa10□□□□□ -0.81
SERF1A-204ENST00000504458 BAZ1BQ9UIG0 1483 aaKnown RBP9.99□□□□□ -0.81
SERF1A-204ENST00000504458 IER5LQ5T953 404 aa9.99□□□□□ -0.81
SERF1A-204ENST00000504458 PDS5BQ9NTI5 1447 aa9.99□□□□□ -0.81
SERF1A-204ENST00000504458 GOLGA2Q08379 1002 aa9.97□□□□□ -0.81
SERF1A-204ENST00000504458 METRNQ9UJH8 293 aa9.97□□□□□ -0.81
SERF1A-204ENST00000504458 RGL2O15211 777 aa9.94□□□□□ -0.82
SERF1A-204ENST00000504458 HRCP23327 699 aa9.94□□□□□ -0.82
SERF1A-204ENST00000504458 HMGXB3Q12766 1538 aa9.92□□□□□ -0.82
SERF1A-204ENST00000504458 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.92□□□□□ -0.82
SERF1A-204ENST00000504458 SEC24BO95487 1268 aa9.92□□□□□ -0.82
SERF1A-204ENST00000504458 MKRN3Q13064 507 aaKnown RBP9.92□□□□□ -0.82
SERF1A-204ENST00000504458 AMER1Q5JTC6 1135 aaPredicted RBP9.92□□□□□ -0.82
SERF1A-204ENST00000504458 ZFP91Q96JP5 570 aaPredicted RBP9.92□□□□□ -0.82
SERF1A-204ENST00000504458 LHX8Q68G74 356 aa9.9□□□□□ -0.82
SERF1A-204ENST00000504458 CABP2Q9NPB3 220 aa9.89□□□□□ -0.83
SERF1A-204ENST00000504458 SMARCA4P51532 1647 aa9.89□□□□□ -0.83
SERF1A-204ENST00000504458 THOC2Q8NI27 1593 aaKnown RBP9.88□□□□□ -0.83
SERF1A-204ENST00000504458 LAMC3Q9Y6N6 1575 aa9.88□□□□□ -0.83
SERF1A-204ENST00000504458 CADPSQ9ULU8 1353 aa9.88□□□□□ -0.83
SERF1A-204ENST00000504458 PLCG2P16885 1265 aa9.87□□□□□ -0.83
SERF1A-204ENST00000504458 MROH2BQ7Z745 1585 aa9.87□□□□□ -0.83
SERF1A-204ENST00000504458 BAZ1AQ9NRL2 1556 aaPredicted RBP9.87□□□□□ -0.83
SERF1A-204ENST00000504458 IRX5P78411 483 aaPredicted RBP9.86□□□□□ -0.83
SERF1A-204ENST00000504458 OCEL1Q9H607 264 aa9.86□□□□□ -0.83
SERF1A-204ENST00000504458 MRC2Q9UBG0 1479 aa9.85□□□□□ -0.83
SERF1A-204ENST00000504458 STK25O00506 426 aa9.85□□□□□ -0.83
SERF1A-204ENST00000504458 BCL11BQ9C0K0 894 aaPredicted RBP9.85□□□□□ -0.83
SERF1A-204ENST00000504458 COLQQ9Y215 455 aaPredicted RBP9.84□□□□□ -0.83
SERF1A-204ENST00000504458 POTEFA5A3E0 1075 aa9.83□□□□□ -0.84
SERF1A-204ENST00000504458 STK24Q9Y6E0 443 aa9.83□□□□□ -0.84
SERF1A-204ENST00000504458 LOC105371045A0A1W2PR82 267 aa9.82□□□□□ -0.84
SERF1A-204ENST00000504458 CYB5RLQ6IPT4 315 aa9.82□□□□□ -0.84
SERF1A-204ENST00000504458 PCGF6Q9BYE7 350 aa9.82□□□□□ -0.84
SERF1A-204ENST00000504458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms