RNA–Protein interactions for RNA: ENST00000502664.5

GYPB-202, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-202ENST00000502664 FOXD4L1Q9NU39 408 aa10.03□□□□□ -0.8
GYPB-202ENST00000502664 CFTRP13569 1480 aa9.98□□□□□ -0.81
GYPB-202ENST00000502664 ARHGEF11O15085 1522 aa9.97□□□□□ -0.81
GYPB-202ENST00000502664 ZNF608Q9ULD9 1512 aaPredicted RBP9.97□□□□□ -0.81
GYPB-202ENST00000502664 CYB5RLQ6IPT4 315 aa9.94□□□□□ -0.82
GYPB-202ENST00000502664 SLC4A1APQ9BWU0 796 aaKnown RBP9.93□□□□□ -0.82
GYPB-202ENST00000502664 ARAP1Q96P48 1450 aa9.88□□□□□ -0.83
GYPB-202ENST00000502664 RSF1Q96T23 1441 aaPredicted RBP9.88□□□□□ -0.83
GYPB-202ENST00000502664 TOP2AP11388 1531 aaKnown RBP9.87□□□□□ -0.83
GYPB-202ENST00000502664 IFT140Q96RY7 1462 aa9.86□□□□□ -0.83
GYPB-202ENST00000502664 SPDYE2BA6NHP3 402 aa9.86□□□□□ -0.83
GYPB-202ENST00000502664 SPDYE6P0CI01 402 aa9.86□□□□□ -0.83
GYPB-202ENST00000502664 PRKAR2AP13861 404 aaKnown RBP9.86□□□□□ -0.83
GYPB-202ENST00000502664 SPDYE2Q495Y8 402 aa9.86□□□□□ -0.83
GYPB-202ENST00000502664 EIF4G3O43432 1585 aaKnown RBP9.85□□□□□ -0.83
GYPB-202ENST00000502664 TOPBP1Q92547 1522 aa9.85□□□□□ -0.83
GYPB-202ENST00000502664 CHD1O14646 1710 aa9.84□□□□□ -0.83
GYPB-202ENST00000502664 AQRO60306 1485 aaKnown RBP eCLIP9.84□□□□□ -0.83
GYPB-202ENST00000502664 C19orf67A6NJJ6 358 aa9.83□□□□□ -0.84
GYPB-202ENST00000502664 PRDM2Q13029 1718 aa9.82□□□□□ -0.84
GYPB-202ENST00000502664 CCDC88BA6NC98 1476 aa9.8□□□□□ -0.84
GYPB-202ENST00000502664 FBLN2P98095 1184 aa9.8□□□□□ -0.84
GYPB-202ENST00000502664 ZBTB22O15209 634 aa9.79□□□□□ -0.84
GYPB-202ENST00000502664 GABBR2O75899 941 aa9.79□□□□□ -0.84
GYPB-202ENST00000502664 CLEC11AQ9Y240 323 aa9.79□□□□□ -0.84
GYPB-202ENST00000502664 SPDYE1Q8NFV5 336 aaPredicted RBP9.78□□□□□ -0.84
GYPB-202ENST00000502664 TARBP1Q13395 1621 aaKnown RBP9.78□□□□□ -0.84
GYPB-202ENST00000502664 LHX8Q68G74 356 aa9.77□□□□□ -0.85
GYPB-202ENST00000502664 ATXN8OSP0DMR3 200 aa9.76□□□□□ -0.85
GYPB-202ENST00000502664 DNMBPQ6XZF7 1577 aa9.75□□□□□ -0.85
GYPB-202ENST00000502664 RAD54L2Q9Y4B4 1467 aa9.74□□□□□ -0.85
GYPB-202ENST00000502664 TDRD9Q8NDG6 1382 aaKnown RBP9.73□□□□□ -0.85
GYPB-202ENST00000502664 POLA1P09884 1462 aaPredicted RBP9.72□□□□□ -0.85
GYPB-202ENST00000502664 CLASP1Q7Z460 1538 aa9.72□□□□□ -0.85
GYPB-202ENST00000502664 ABCC8Q09428 1581 aa9.71□□□□□ -0.86
GYPB-202ENST00000502664 MKRN4PQ13434 485 aaPredicted RBP9.7□□□□□ -0.86
GYPB-202ENST00000502664 SSUH2Q9Y2M2 353 aa9.7□□□□□ -0.86
GYPB-202ENST00000502664 SNAPC4Q5SXM2 1469 aa9.7□□□□□ -0.86
GYPB-202ENST00000502664 ZNF692Q9BU19 519 aaPredicted RBP9.68□□□□□ -0.86
GYPB-202ENST00000502664 SOGA1O94964 1423 aa9.67□□□□□ -0.86
GYPB-202ENST00000502664 CHADLQ6NUI6 762 aa9.67□□□□□ -0.86
GYPB-202ENST00000502664 CHMP7Q8WUX9 453 aaPredicted RBP9.64□□□□□ -0.87
GYPB-202ENST00000502664 FGD5Q6ZNL6 1462 aa9.63□□□□□ -0.87
GYPB-202ENST00000502664 SYNJ1O43426 1573 aa9.63□□□□□ -0.87
GYPB-202ENST00000502664 GAPVD1Q14C86 1478 aa9.62□□□□□ -0.87
GYPB-202ENST00000502664 ERCC6L2Q5T890 1561 aa9.62□□□□□ -0.87
GYPB-202ENST00000502664 MAGI1Q96QZ7 1491 aaPredicted RBP9.6□□□□□ -0.87
GYPB-202ENST00000502664 POTEIP0CG38 1075 aa9.6□□□□□ -0.87
GYPB-202ENST00000502664 CUX1P39880 1505 aa9.6□□□□□ -0.87
GYPB-202ENST00000502664 SYNJ2O15056 1496 aa9.59□□□□□ -0.87
GYPB-202ENST00000502664 GRIN2BQ13224 1484 aa9.59□□□□□ -0.87
GYPB-202ENST00000502664 PRR29P0C7W0 189 aa9.57□□□□□ -0.88
GYPB-202ENST00000502664 WDR97A6NE52 1622 aa9.56□□□□□ -0.88
GYPB-202ENST00000502664 PBRM1Q86U86 1689 aa9.55□□□□□ -0.88
GYPB-202ENST00000502664 CD44P16070 742 aaKnown RBP9.52□□□□□ -0.89
GYPB-202ENST00000502664 CEP170Q5SW79 1584 aa9.5□□□□□ -0.89
GYPB-202ENST00000502664 ABCA5Q8WWZ7 1642 aa9.5□□□□□ -0.89
GYPB-202ENST00000502664 KIF13AQ9H1H9 1805 aa9.5□□□□□ -0.89
GYPB-202ENST00000502664 GRIN2AQ12879 1464 aa9.49□□□□□ -0.89
GYPB-202ENST00000502664 FARP1Q9Y4F1 1045 aaPredicted RBP9.49□□□□□ -0.89
GYPB-202ENST00000502664 PLSCR2Q9NRY7 297 aa9.48□□□□□ -0.89
GYPB-202ENST00000502664 ABCA10Q8WWZ4 1543 aa9.47□□□□□ -0.89
GYPB-202ENST00000502664 KDM4FA0A1W2PPD8 638 aa9.47□□□□□ -0.89
GYPB-202ENST00000502664 NUP160Q12769 1436 aa9.47□□□□□ -0.89
GYPB-202ENST00000502664 ILDR1Q86SU0 546 aaPredicted RBP9.46□□□□□ -0.9
GYPB-202ENST00000502664 SHROOM2Q13796 1616 aa9.45□□□□□ -0.9
GYPB-202ENST00000502664 CLCN6P51797 869 aa9.45□□□□□ -0.9
GYPB-202ENST00000502664 ADAMTS12P58397 1594 aa9.45□□□□□ -0.9
GYPB-202ENST00000502664 FAM69CQ0P6D2 419 aa9.42□□□□□ -0.9
GYPB-202ENST00000502664 DCBLD2Q96PD2 775 aa9.41□□□□□ -0.9
GYPB-202ENST00000502664 PRG4Q92954 1404 aaPredicted RBP9.4□□□□□ -0.9
GYPB-202ENST00000502664 ABCC10Q5T3U5 1492 aa9.4□□□□□ -0.91
GYPB-202ENST00000502664 FHAD1B1AJZ9 1412 aa9.39□□□□□ -0.91
GYPB-202ENST00000502664 JPH4Q96JJ6 628 aa9.38□□□□□ -0.91
GYPB-202ENST00000502664 DIP2BQ9P265 1576 aa9.37□□□□□ -0.91
GYPB-202ENST00000502664 ZNF579Q8NAF0 562 aaKnown RBP9.36□□□□□ -0.91
GYPB-202ENST00000502664 WRNQ14191 1432 aaPredicted RBP eCLIP9.36□□□□□ -0.91
GYPB-202ENST00000502664 KDM6BO15054 1643 aa9.35□□□□□ -0.91
GYPB-202ENST00000502664 ADCY10Q96PN6 1610 aa9.35□□□□□ -0.91
GYPB-202ENST00000502664 MAPKBP1O60336 1514 aa9.34□□□□□ -0.91
GYPB-202ENST00000502664 TSPOAP1O95153 1857 aa9.34□□□□□ -0.91
GYPB-202ENST00000502664 ERICH3Q5RHP9 1530 aa9.33□□□□□ -0.92
GYPB-202ENST00000502664 RUSC2Q8N2Y8 1516 aa9.33□□□□□ -0.92
GYPB-202ENST00000502664 BIVM-ERCC5R4GMW8 1640 aa9.32□□□□□ -0.92
GYPB-202ENST00000502664 ZRANB1Q9UGI0 708 aa9.32□□□□□ -0.92
GYPB-202ENST00000502664 TOP2BQ02880 1626 aa9.31□□□□□ -0.92
GYPB-202ENST00000502664 OTUD5Q96G74 571 aa9.31□□□□□ -0.92
GYPB-202ENST00000502664 NPM1P06748 294 aaKnown RBP eCLIP9.3□□□□□ -0.92
GYPB-202ENST00000502664 GALR2O43603 387 aaPredicted RBP9.29□□□□□ -0.92
GYPB-202ENST00000502664 POTEB2H3BUK9 544 aa9.28□□□□□ -0.92
GYPB-202ENST00000502664 ADGRL1O94910 1474 aa9.28□□□□□ -0.92
GYPB-202ENST00000502664 TTBK1Q5TCY1 1321 aaPredicted RBP9.27□□□□□ -0.93
GYPB-202ENST00000502664 PPRC1Q5VV67 1664 aaKnown RBP9.26□□□□□ -0.93
GYPB-202ENST00000502664 CREBZFQ9NS37 354 aa9.26□□□□□ -0.93
GYPB-202ENST00000502664 COL17A1Q9UMD9 1497 aaPredicted RBP9.26□□□□□ -0.93
GYPB-202ENST00000502664 SUPT5HO00267 1087 aaKnown RBP9.25□□□□□ -0.93
GYPB-202ENST00000502664 HECW2Q9P2P5 1572 aa9.24□□□□□ -0.93
GYPB-202ENST00000502664 KIAA0586Q9BVV6 1533 aa9.22□□□□□ -0.93
GYPB-202ENST00000502664 POTEMA6NI47 508 aa9.22□□□□□ -0.93
GYPB-202ENST00000502664 ASXL2Q76L83 1435 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms