RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 MS4A3Q96HJ5 214 aa14.85□□□□□ -0.03
CRNDE-201ENST00000501177 NUBP1P53384 320 aa14.81□□□□□ -0.04
CRNDE-201ENST00000501177 LHX8Q68G74 356 aa14.8□□□□□ -0.04
CRNDE-201ENST00000501177 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
CRNDE-201ENST00000501177 KIF12Q96FN5 646 aa14.77□□□□□ -0.05
CRNDE-201ENST00000501177 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
CRNDE-201ENST00000501177 PELP1Q8IZL8 1130 aaKnown RBP14.74□□□□□ -0.05
CRNDE-201ENST00000501177 MAP3K13O43283 966 aa14.71□□□□□ -0.05
CRNDE-201ENST00000501177 VASPP50552 380 aaPredicted RBP14.7□□□□□ -0.06
CRNDE-201ENST00000501177 TRPC6Q9Y210 931 aa14.69□□□□□ -0.06
CRNDE-201ENST00000501177 ATMINO43313 823 aaPredicted RBP14.66□□□□□ -0.06
CRNDE-201ENST00000501177 ASTLQ6HA08 431 aaPredicted RBP14.66□□□□□ -0.06
CRNDE-201ENST00000501177 FAM212AQ96EL1 285 aa14.61□□□□□ -0.07
CRNDE-201ENST00000501177 POTEB2H3BUK9 544 aa14.6□□□□□ -0.07
CRNDE-201ENST00000501177 BMP2KQ9NSY1 1161 aaPredicted RBP14.59□□□□□ -0.07
CRNDE-201ENST00000501177 ATN1P54259 1190 aaPredicted RBP14.58□□□□□ -0.08
CRNDE-201ENST00000501177 KLHL34Q8N239 644 aa14.55□□□□□ -0.08
CRNDE-201ENST00000501177 PCDHB13Q9Y5F0 798 aa14.55□□□□□ -0.08
CRNDE-201ENST00000501177 DCAF8Q5TAQ9 597 aa14.53□□□□□ -0.08
CRNDE-201ENST00000501177 METRNQ9UJH8 293 aa14.53□□□□□ -0.08
CRNDE-201ENST00000501177 IFNL1Q8IU54 200 aa14.52□□□□□ -0.09
CRNDE-201ENST00000501177 SGIP1Q9BQI5 828 aa14.51□□□□□ -0.09
CRNDE-201ENST00000501177 TIE1P35590 1138 aa14.5□□□□□ -0.09
CRNDE-201ENST00000501177 IFNLR1Q8IU57 520 aaPredicted RBP14.5□□□□□ -0.09
CRNDE-201ENST00000501177 SLC39A7Q92504 469 aa14.49□□□□□ -0.09
CRNDE-201ENST00000501177 TTLL13PA6NNM8 815 aa14.48□□□□□ -0.09
CRNDE-201ENST00000501177 PYGBP11216 843 aa14.48□□□□□ -0.09
CRNDE-201ENST00000501177 C7P10643 843 aa14.47□□□□□ -0.09
CRNDE-201ENST00000501177 OTUD5Q96G74 571 aa14.46□□□□□ -0.09
CRNDE-201ENST00000501177 POTEJP0CG39 1038 aa14.44□□□□□ -0.1
CRNDE-201ENST00000501177 POTEFA5A3E0 1075 aa14.43□□□□□ -0.1
CRNDE-201ENST00000501177 PCDHB8Q9UN66 801 aa14.38□□□□□ -0.11
CRNDE-201ENST00000501177 TRIM35Q9UPQ4 493 aa14.38□□□□□ -0.11
CRNDE-201ENST00000501177 GSE1Q14687 1217 aa14.36□□□□□ -0.11
CRNDE-201ENST00000501177 SPOCK2Q92563 424 aa14.35□□□□□ -0.11
CRNDE-201ENST00000501177 TMEM106CQ9BVX2 250 aa14.35□□□□□ -0.11
CRNDE-201ENST00000501177 COLQQ9Y215 455 aaPredicted RBP14.35□□□□□ -0.11
CRNDE-201ENST00000501177 CHRM1P11229 460 aaPredicted RBP14.26□□□□□ -0.13
CRNDE-201ENST00000501177 IER5LQ5T953 404 aa14.25□□□□□ -0.13
CRNDE-201ENST00000501177 CIZ1Q9ULV3 898 aaPredicted RBP14.25□□□□□ -0.13
CRNDE-201ENST00000501177 SEC24BO95487 1268 aa14.23□□□□□ -0.13
CRNDE-201ENST00000501177 ZNF467Q7Z7K2 595 aaPredicted RBP14.2□□□□□ -0.14
CRNDE-201ENST00000501177 IRX5P78411 483 aaPredicted RBP14.17□□□□□ -0.14
CRNDE-201ENST00000501177 MAMSTRQ6ZN01 415 aa14.17□□□□□ -0.14
CRNDE-201ENST00000501177 SCUBE2Q9NQ36 999 aa14.14□□□□□ -0.15
CRNDE-201ENST00000501177 PSEN1P49768 467 aa14.13□□□□□ -0.15
CRNDE-201ENST00000501177 PLCG2P16885 1265 aa14.11□□□□□ -0.15
CRNDE-201ENST00000501177 OCEL1Q9H607 264 aa14.07□□□□□ -0.16
CRNDE-201ENST00000501177 PDAP1Q13442 181 aaKnown RBP14.05□□□□□ -0.16
CRNDE-201ENST00000501177 PDCD7Q8N8D1 485 aaKnown RBP14.02□□□□□ -0.17
CRNDE-201ENST00000501177 LCE2DQ5TA82 110 aaPredicted RBP14□□□□□ -0.17
CRNDE-201ENST00000501177 ABCC9O60706 1549 aa14□□□□□ -0.17
CRNDE-201ENST00000501177 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
CRNDE-201ENST00000501177 GOLGA2Q08379 1002 aa13.98□□□□□ -0.17
CRNDE-201ENST00000501177 MKRN3Q13064 507 aaKnown RBP13.98□□□□□ -0.17
CRNDE-201ENST00000501177 RNF25Q96BH1 459 aaPredicted RBP13.98□□□□□ -0.17
CRNDE-201ENST00000501177 CABP2Q9NPB3 220 aa13.96□□□□□ -0.17
CRNDE-201ENST00000501177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.18
CRNDE-201ENST00000501177 POTEMA6NI47 508 aa13.93□□□□□ -0.18
CRNDE-201ENST00000501177 ILDR1Q86SU0 546 aaPredicted RBP13.93□□□□□ -0.18
CRNDE-201ENST00000501177 SLAIN1Q8ND83 568 aa13.93□□□□□ -0.18
CRNDE-201ENST00000501177 FAM163AQ96GL9 167 aaPredicted RBP13.93□□□□□ -0.18
CRNDE-201ENST00000501177 POTEGQ6S5H5 508 aa13.91□□□□□ -0.18
CRNDE-201ENST00000501177 DPY19L2Q6NUT2 758 aa13.89□□□□□ -0.19
CRNDE-201ENST00000501177 RIOK3O14730 519 aaKnown RBP13.87□□□□□ -0.19
CRNDE-201ENST00000501177 CCDC180Q9P1Z9 1646 aa13.86□□□□□ -0.19
CRNDE-201ENST00000501177 EFCAB3Q8N7B9 438 aa13.84□□□□□ -0.19
CRNDE-201ENST00000501177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.83□□□□□ -0.2
CRNDE-201ENST00000501177 ZFP91Q96JP5 570 aaPredicted RBP13.83□□□□□ -0.2
CRNDE-201ENST00000501177 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.82□□□□□ -0.2
CRNDE-201ENST00000501177 L3MBTL3Q96JM7 780 aaPredicted RBP13.8□□□□□ -0.2
CRNDE-201ENST00000501177 VGFO15240 615 aaPredicted RBP13.78□□□□□ -0.2
CRNDE-201ENST00000501177 PKD2Q13563 968 aa13.77□□□□□ -0.21
CRNDE-201ENST00000501177 C3orf67Q6ZVT6 689 aa13.76□□□□□ -0.21
CRNDE-201ENST00000501177 ST18O60284 1047 aa13.74□□□□□ -0.21
CRNDE-201ENST00000501177 ECM2O94769 699 aaPredicted RBP13.73□□□□□ -0.21
CRNDE-201ENST00000501177 BOLA1Q9Y3E2 137 aa13.72□□□□□ -0.21
CRNDE-201ENST00000501177 MS4A4AQ96JQ5 239 aa13.69□□□□□ -0.22
CRNDE-201ENST00000501177 RGL2O15211 777 aa13.68□□□□□ -0.22
CRNDE-201ENST00000501177 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
CRNDE-201ENST00000501177 PHF8Q9UPP1 1060 aa13.67□□□□□ -0.22
CRNDE-201ENST00000501177 PLSCR2Q9NRY7 297 aa13.66□□□□□ -0.22
CRNDE-201ENST00000501177 TMEM121BQ9BXQ6 578 aaPredicted RBP13.65□□□□□ -0.22
CRNDE-201ENST00000501177 SOX12O15370 315 aa13.64□□□□□ -0.23
CRNDE-201ENST00000501177 STK24Q9Y6E0 443 aa13.62□□□□□ -0.23
CRNDE-201ENST00000501177 G3V3G9 751 aa13.61□□□□□ -0.23
CRNDE-201ENST00000501177 SNPHO15079 494 aa13.6□□□□□ -0.23
CRNDE-201ENST00000501177 STK25O00506 426 aa13.59□□□□□ -0.23
CRNDE-201ENST00000501177 MICALL2Q8IY33 904 aa13.59□□□□□ -0.23
CRNDE-201ENST00000501177 PCDH10Q9P2E7 1040 aa13.59□□□□□ -0.23
CRNDE-201ENST00000501177 FBXO22Q8NEZ5 403 aa13.58□□□□□ -0.24
CRNDE-201ENST00000501177 MARVELD3Q96A59 401 aa13.57□□□□□ -0.24
CRNDE-201ENST00000501177 TAOK2Q9UL54 1235 aa13.57□□□□□ -0.24
CRNDE-201ENST00000501177 TMEM92Q6UXU6 159 aa13.56□□□□□ -0.24
CRNDE-201ENST00000501177 MFRPQ9BY79 579 aa13.55□□□□□ -0.24
CRNDE-201ENST00000501177 HOXB3P14651 431 aaPredicted RBP13.53□□□□□ -0.24
CRNDE-201ENST00000501177 CDAN1Q8IWY9 1227 aa13.53□□□□□ -0.24
CRNDE-201ENST00000501177 NLRP6P59044 892 aa13.51□□□□□ -0.25
CRNDE-201ENST00000501177 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
CRNDE-201ENST00000501177 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms