RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 TSPYL2Q9H2G4 693 aaPredicted RBP16.56■□□□□ 0.24
VPS45-210ENST00000497638 GALR2O43603 387 aaPredicted RBP16.53■□□□□ 0.24
VPS45-210ENST00000497638 POTEIP0CG38 1075 aa16.53■□□□□ 0.24
VPS45-210ENST00000497638 BICRAQ9NZM4 1560 aa16.52■□□□□ 0.24
VPS45-210ENST00000497638 DCAF8L2P0C7V8 631 aa16.52■□□□□ 0.24
VPS45-210ENST00000497638 MYO15BQ96JP2 1530 aa16.48■□□□□ 0.23
VPS45-210ENST00000497638 ZBTB47Q9UFB7 747 aaPredicted RBP16.45■□□□□ 0.22
VPS45-210ENST00000497638 FBXO3Q9UK99 471 aa16.44■□□□□ 0.22
VPS45-210ENST00000497638 LHX8Q68G74 356 aa16.41■□□□□ 0.22
VPS45-210ENST00000497638 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
VPS45-210ENST00000497638 RASEFQ8IZ41 740 aa16.38■□□□□ 0.21
VPS45-210ENST00000497638 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
VPS45-210ENST00000497638 MS4A3Q96HJ5 214 aa16.36■□□□□ 0.21
VPS45-210ENST00000497638 CECR2Q9BXF3 1484 aa16.31■□□□□ 0.2
VPS45-210ENST00000497638 CC2D2AQ9P2K1 1620 aa16.29■□□□□ 0.2
VPS45-210ENST00000497638 KIF12Q96FN5 646 aa16.28■□□□□ 0.2
VPS45-210ENST00000497638 NUBP1P53384 320 aa16.27■□□□□ 0.2
VPS45-210ENST00000497638 MAP3K13O43283 966 aa16.22■□□□□ 0.19
VPS45-210ENST00000497638 FAM212AQ96EL1 285 aa16.22■□□□□ 0.19
VPS45-210ENST00000497638 DNAJC5Q9H3Z4 198 aa16.2■□□□□ 0.18
VPS45-210ENST00000497638 VASPP50552 380 aaPredicted RBP16.19■□□□□ 0.18
VPS45-210ENST00000497638 ASTLQ6HA08 431 aaPredicted RBP16.18■□□□□ 0.18
VPS45-210ENST00000497638 KLHL34Q8N239 644 aa16.18■□□□□ 0.18
VPS45-210ENST00000497638 ATMINO43313 823 aaPredicted RBP16.17■□□□□ 0.18
VPS45-210ENST00000497638 PELP1Q8IZL8 1130 aaKnown RBP16.17■□□□□ 0.18
VPS45-210ENST00000497638 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
VPS45-210ENST00000497638 DCAF8Q5TAQ9 597 aa16.14■□□□□ 0.17
VPS45-210ENST00000497638 PCDHB13Q9Y5F0 798 aa16.11■□□□□ 0.17
VPS45-210ENST00000497638 DCAF1Q9Y4B6 1507 aa16.1■□□□□ 0.17
VPS45-210ENST00000497638 TRPC6Q9Y210 931 aa16.1■□□□□ 0.17
VPS45-210ENST00000497638 SLC39A7Q92504 469 aa16.09■□□□□ 0.17
VPS45-210ENST00000497638 ATN1P54259 1190 aaPredicted RBP16.08■□□□□ 0.16
VPS45-210ENST00000497638 SGIP1Q9BQI5 828 aa16.07■□□□□ 0.16
VPS45-210ENST00000497638 METRNQ9UJH8 293 aa16.07■□□□□ 0.16
VPS45-210ENST00000497638 ZCCHC6Q5VYS8 1495 aaKnown RBP16.06■□□□□ 0.16
VPS45-210ENST00000497638 BMP2KQ9NSY1 1161 aaPredicted RBP16.06■□□□□ 0.16
VPS45-210ENST00000497638 C7P10643 843 aa16.05■□□□□ 0.16
VPS45-210ENST00000497638 TIE1P35590 1138 aa16.05■□□□□ 0.16
VPS45-210ENST00000497638 SCRIBQ14160 1630 aa16.03■□□□□ 0.16
VPS45-210ENST00000497638 POTEB2H3BUK9 544 aa16.01■□□□□ 0.15
VPS45-210ENST00000497638 PYGBP11216 843 aa16■□□□□ 0.15
VPS45-210ENST00000497638 IFNL1Q8IU54 200 aa15.99■□□□□ 0.15
VPS45-210ENST00000497638 TTLL13PA6NNM8 815 aa15.97■□□□□ 0.15
VPS45-210ENST00000497638 GSE1Q14687 1217 aa15.95■□□□□ 0.14
VPS45-210ENST00000497638 IFNLR1Q8IU57 520 aaPredicted RBP15.91■□□□□ 0.14
VPS45-210ENST00000497638 OTUD5Q96G74 571 aa15.91■□□□□ 0.14
VPS45-210ENST00000497638 TRIM35Q9UPQ4 493 aa15.89■□□□□ 0.13
VPS45-210ENST00000497638 SPOCK2Q92563 424 aa15.88■□□□□ 0.13
VPS45-210ENST00000497638 TMEM106CQ9BVX2 250 aa15.88■□□□□ 0.13
VPS45-210ENST00000497638 SEC24BO95487 1268 aa15.86■□□□□ 0.13
VPS45-210ENST00000497638 PCDHB8Q9UN66 801 aa15.84■□□□□ 0.13
VPS45-210ENST00000497638 CIZ1Q9ULV3 898 aaPredicted RBP15.81■□□□□ 0.12
VPS45-210ENST00000497638 POTEFA5A3E0 1075 aa15.8■□□□□ 0.12
VPS45-210ENST00000497638 POTEJP0CG39 1038 aa15.79■□□□□ 0.12
VPS45-210ENST00000497638 MAMSTRQ6ZN01 415 aa15.79■□□□□ 0.12
VPS45-210ENST00000497638 CUX2O14529 1486 aa15.78■□□□□ 0.12
VPS45-210ENST00000497638 IER5LQ5T953 404 aa15.78■□□□□ 0.12
VPS45-210ENST00000497638 COLQQ9Y215 455 aaPredicted RBP15.77■□□□□ 0.12
VPS45-210ENST00000497638 ZNF467Q7Z7K2 595 aaPredicted RBP15.76■□□□□ 0.11
VPS45-210ENST00000497638 SCUBE2Q9NQ36 999 aa15.75■□□□□ 0.11
VPS45-210ENST00000497638 CHRM1P11229 460 aaPredicted RBP15.74■□□□□ 0.11
VPS45-210ENST00000497638 PLCG2P16885 1265 aa15.68■□□□□ 0.1
VPS45-210ENST00000497638 GOLGA2Q08379 1002 aa15.63■□□□□ 0.09
VPS45-210ENST00000497638 ERCC6Q03468 1493 aa15.63■□□□□ 0.09
VPS45-210ENST00000497638 PSEN1P49768 467 aa15.61■□□□□ 0.09
VPS45-210ENST00000497638 IRX5P78411 483 aaPredicted RBP15.61■□□□□ 0.09
VPS45-210ENST00000497638 OCEL1Q9H607 264 aa15.58■□□□□ 0.08
VPS45-210ENST00000497638 MKRN3Q13064 507 aaKnown RBP15.57■□□□□ 0.08
VPS45-210ENST00000497638 PDAP1Q13442 181 aaKnown RBP15.56■□□□□ 0.08
VPS45-210ENST00000497638 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
VPS45-210ENST00000497638 NCAPD3P42695 1498 aa15.52■□□□□ 0.08
VPS45-210ENST00000497638 FAM163AQ96GL9 167 aaPredicted RBP15.48■□□□□ 0.07
VPS45-210ENST00000497638 SLAIN1Q8ND83 568 aa15.46■□□□□ 0.07
VPS45-210ENST00000497638 CABP2Q9NPB3 220 aa15.44■□□□□ 0.06
VPS45-210ENST00000497638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.44■□□□□ 0.067e-6■■□□□ 12.8
VPS45-210ENST00000497638 POTEMA6NI47 508 aa15.43■□□□□ 0.06
VPS45-210ENST00000497638 POTEGQ6S5H5 508 aa15.4■□□□□ 0.06
VPS45-210ENST00000497638 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
VPS45-210ENST00000497638 HMGXB3Q12766 1538 aa15.39■□□□□ 0.05
VPS45-210ENST00000497638 PDCD7Q8N8D1 485 aaKnown RBP15.39■□□□□ 0.05
VPS45-210ENST00000497638 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.38■□□□□ 0.05
VPS45-210ENST00000497638 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
VPS45-210ENST00000497638 L3MBTL3Q96JM7 780 aaPredicted RBP15.36■□□□□ 0.05
VPS45-210ENST00000497638 NESP48681 1621 aa15.35■□□□□ 0.05
VPS45-210ENST00000497638 THOC2Q8NI27 1593 aaKnown RBP15.34■□□□□ 0.05
VPS45-210ENST00000497638 RIOK3O14730 519 aaKnown RBP15.33■□□□□ 0.04
VPS45-210ENST00000497638 C3orf67Q6ZVT6 689 aa15.31■□□□□ 0.04
VPS45-210ENST00000497638 LCE2DQ5TA82 110 aaPredicted RBP15.3■□□□□ 0.04
VPS45-210ENST00000497638 RNF25Q96BH1 459 aaPredicted RBP15.28■□□□□ 0.04
VPS45-210ENST00000497638 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
VPS45-210ENST00000497638 G3V3G9 751 aa15.26■□□□□ 0.03
VPS45-210ENST00000497638 DPY19L2Q6NUT2 758 aa15.26■□□□□ 0.03
VPS45-210ENST00000497638 ILDR1Q86SU0 546 aaPredicted RBP15.26■□□□□ 0.03
VPS45-210ENST00000497638 EFCAB3Q8N7B9 438 aa15.26■□□□□ 0.03
VPS45-210ENST00000497638 LAMC3Q9Y6N6 1575 aa15.25■□□□□ 0.03
VPS45-210ENST00000497638 VGFO15240 615 aaPredicted RBP15.25■□□□□ 0.03
VPS45-210ENST00000497638 BAZ1BQ9UIG0 1483 aaKnown RBP15.24■□□□□ 0.03
VPS45-210ENST00000497638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.23■□□□□ 0.03
VPS45-210ENST00000497638 ZFP91Q96JP5 570 aaPredicted RBP15.23■□□□□ 0.03
VPS45-210ENST00000497638 PLSCR2Q9NRY7 297 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms