RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
VPS36-206ENST00000497149 GSE1Q14687 1217 aa12.34□□□□□ -0.43
VPS36-206ENST00000497149 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
VPS36-206ENST00000497149 DCAF8Q5TAQ9 597 aa12.31□□□□□ -0.44
VPS36-206ENST00000497149 ZNF579Q8NAF0 562 aaKnown RBP12.31□□□□□ -0.44
VPS36-206ENST00000497149 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
VPS36-206ENST00000497149 RGL2O15211 777 aa12.29□□□□□ -0.44
VPS36-206ENST00000497149 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
VPS36-206ENST00000497149 RASEFQ8IZ41 740 aa12.27□□□□□ -0.45
VPS36-206ENST00000497149 FAM212AQ96EL1 285 aa12.27□□□□□ -0.45
VPS36-206ENST00000497149 PAK3O75914 559 aaPredicted RBP12.22□□□□□ -0.45
VPS36-206ENST00000497149 ZRANB1Q9UGI0 708 aa12.22□□□□□ -0.45
VPS36-206ENST00000497149 CHRM1P11229 460 aaPredicted RBP12.16□□□□□ -0.46
VPS36-206ENST00000497149 RNF25Q96BH1 459 aaPredicted RBP12.14□□□□□ -0.47
VPS36-206ENST00000497149 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
VPS36-206ENST00000497149 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
VPS36-206ENST00000497149 BBXQ8WY36 941 aaPredicted RBP12.11□□□□□ -0.47
VPS36-206ENST00000497149 PYGBP11216 843 aa12.1□□□□□ -0.47
VPS36-206ENST00000497149 RIOK3O14730 519 aaKnown RBP12.09□□□□□ -0.47
VPS36-206ENST00000497149 CHGAP10645 457 aaKnown RBP12.09□□□□□ -0.47
VPS36-206ENST00000497149 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
VPS36-206ENST00000497149 DCBLD2Q96PD2 775 aa12.05□□□□□ -0.48
VPS36-206ENST00000497149 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
VPS36-206ENST00000497149 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
VPS36-206ENST00000497149 PHF12Q96QT6 1004 aa12.03□□□□□ -0.48
VPS36-206ENST00000497149 GALR2O43603 387 aaPredicted RBP12.02□□□□□ -0.49
VPS36-206ENST00000497149 HS6ST3Q8IZP7 471 aa12.02□□□□□ -0.49
VPS36-206ENST00000497149 CCDC61Q9Y6R9 512 aa12.02□□□□□ -0.49
VPS36-206ENST00000497149 VGFO15240 615 aaPredicted RBP12.01□□□□□ -0.49
VPS36-206ENST00000497149 LHX8Q68G74 356 aa11.99□□□□□ -0.49
VPS36-206ENST00000497149 SGIP1Q9BQI5 828 aa11.97□□□□□ -0.49
VPS36-206ENST00000497149 PAXIP1Q6ZW49 1069 aaPredicted RBP11.95□□□□□ -0.5
VPS36-206ENST00000497149 STK25O00506 426 aa11.94□□□□□ -0.5
VPS36-206ENST00000497149 ZNF467Q7Z7K2 595 aaPredicted RBP11.94□□□□□ -0.5
VPS36-206ENST00000497149 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
VPS36-206ENST00000497149 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.93□□□□□ -0.5
VPS36-206ENST00000497149 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
VPS36-206ENST00000497149 ZFP91Q96JP5 570 aaPredicted RBP11.93□□□□□ -0.5
VPS36-206ENST00000497149 CFAP44Q96MT7 982 aa11.93□□□□□ -0.5
VPS36-206ENST00000497149 SPRYD3Q8NCJ5 442 aa11.92□□□□□ -0.5
VPS36-206ENST00000497149 MS4A3Q96HJ5 214 aa11.91□□□□□ -0.5
VPS36-206ENST00000497149 KIF12Q96FN5 646 aa11.9□□□□□ -0.5
VPS36-206ENST00000497149 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.5
VPS36-206ENST00000497149 PCDHB13Q9Y5F0 798 aa11.9□□□□□ -0.5
VPS36-206ENST00000497149 ASTLQ6HA08 431 aaPredicted RBP11.89□□□□□ -0.51
VPS36-206ENST00000497149 BCL11BQ9C0K0 894 aaPredicted RBP11.89□□□□□ -0.51
VPS36-206ENST00000497149 STK24Q9Y6E0 443 aa11.88□□□□□ -0.51
VPS36-206ENST00000497149 MAP3K13O43283 966 aa11.87□□□□□ -0.51
VPS36-206ENST00000497149 PDAP1Q13442 181 aaKnown RBP11.86□□□□□ -0.51
VPS36-206ENST00000497149 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
VPS36-206ENST00000497149 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
VPS36-206ENST00000497149 ATMINO43313 823 aaPredicted RBP11.82□□□□□ -0.52
VPS36-206ENST00000497149 PSEN1P49768 467 aa11.82□□□□□ -0.52
VPS36-206ENST00000497149 TIE1P35590 1138 aa11.79□□□□□ -0.52
VPS36-206ENST00000497149 SLC39A7Q92504 469 aa11.79□□□□□ -0.52
VPS36-206ENST00000497149 GTPBP6O43824 516 aaPredicted RBP11.78□□□□□ -0.52
VPS36-206ENST00000497149 C7P10643 843 aa11.78□□□□□ -0.52
VPS36-206ENST00000497149 VSIG10Q8N0Z9 540 aa11.78□□□□□ -0.52
VPS36-206ENST00000497149 PELP1Q8IZL8 1130 aaKnown RBP11.77□□□□□ -0.53
VPS36-206ENST00000497149 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
VPS36-206ENST00000497149 BMP2KQ9NSY1 1161 aaPredicted RBP11.72□□□□□ -0.53
VPS36-206ENST00000497149 METRNQ9UJH8 293 aa11.72□□□□□ -0.53
VPS36-206ENST00000497149 RYDENQ9NUL5 291 aaKnown RBP11.71□□□□□ -0.53
VPS36-206ENST00000497149 ATN1P54259 1190 aaPredicted RBP11.7□□□□□ -0.54
VPS36-206ENST00000497149 KDM2AQ9Y2K7 1162 aa11.69□□□□□ -0.54
VPS36-206ENST00000497149 POTEB2H3BUK9 544 aa11.66□□□□□ -0.54
VPS36-206ENST00000497149 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
VPS36-206ENST00000497149 TRPC6Q9Y210 931 aa11.66□□□□□ -0.54
VPS36-206ENST00000497149 TTLL13PA6NNM8 815 aa11.65□□□□□ -0.54
VPS36-206ENST00000497149 IER5LQ5T953 404 aa11.65□□□□□ -0.54
VPS36-206ENST00000497149 EFCAB3Q8N7B9 438 aa11.64□□□□□ -0.55
VPS36-206ENST00000497149 OTUD5Q96G74 571 aa11.64□□□□□ -0.55
VPS36-206ENST00000497149 TMEM106CQ9BVX2 250 aa11.63□□□□□ -0.55
VPS36-206ENST00000497149 MFRPQ9BY79 579 aa11.63□□□□□ -0.55
VPS36-206ENST00000497149 MAMSTRQ6ZN01 415 aa11.62□□□□□ -0.55
VPS36-206ENST00000497149 SOX12O15370 315 aa11.61□□□□□ -0.55
VPS36-206ENST00000497149 NLRP6P59044 892 aa11.57□□□□□ -0.56
VPS36-206ENST00000497149 GOLGA2Q08379 1002 aa11.56□□□□□ -0.56
VPS36-206ENST00000497149 FBXO22Q8NEZ5 403 aa11.56□□□□□ -0.56
VPS36-206ENST00000497149 PHF8Q9UPP1 1060 aa11.56□□□□□ -0.56
VPS36-206ENST00000497149 TRIM35Q9UPQ4 493 aa11.56□□□□□ -0.56
VPS36-206ENST00000497149 POTEFA5A3E0 1075 aa11.54□□□□□ -0.56
VPS36-206ENST00000497149 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
VPS36-206ENST00000497149 PPP1R37O75864 691 aa11.5□□□□□ -0.57
VPS36-206ENST00000497149 MKRN3Q13064 507 aaKnown RBP11.5□□□□□ -0.57
VPS36-206ENST00000497149 SCUBE2Q9NQ36 999 aa11.5□□□□□ -0.57
VPS36-206ENST00000497149 SEC24BO95487 1268 aa11.49□□□□□ -0.57
VPS36-206ENST00000497149 MS4A4AQ96JQ5 239 aa11.47□□□□□ -0.57
VPS36-206ENST00000497149 COLQQ9Y215 455 aaPredicted RBP11.47□□□□□ -0.57
VPS36-206ENST00000497149 CADPS2Q86UW7 1296 aa11.45□□□□□ -0.58
VPS36-206ENST00000497149 BCANQ96GW7 911 aa11.45□□□□□ -0.58
VPS36-206ENST00000497149 IRX5P78411 483 aaPredicted RBP11.43□□□□□ -0.58
VPS36-206ENST00000497149 ILDR1Q86SU0 546 aaPredicted RBP11.42□□□□□ -0.58
VPS36-206ENST00000497149 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.586e-7■□□□□ 8.1
VPS36-206ENST00000497149 PLCG2P16885 1265 aa11.41□□□□□ -0.58
VPS36-206ENST00000497149 OCEL1Q9H607 264 aa11.39□□□□□ -0.59
VPS36-206ENST00000497149 WDR70Q9NW82 654 aa11.35□□□□□ -0.59
VPS36-206ENST00000497149 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
VPS36-206ENST00000497149 PDCD7Q8N8D1 485 aaKnown RBP11.31□□□□□ -0.6
VPS36-206ENST00000497149 NCKAP5LQ9HCH0 1330 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms