RNA–Protein interactions for RNA: ENST00000496897.5

USP13-203, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 2 BASIC

Gene USP13, Length 2,747 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-203ENST00000496897 CUX2O14529 1486 aa11.55□□□□□ -0.56
USP13-203ENST00000496897 KLHL34Q8N239 644 aa11.53□□□□□ -0.56
USP13-203ENST00000496897 BAZ1BQ9UIG0 1483 aaKnown RBP11.51□□□□□ -0.57
USP13-203ENST00000496897 BRPF3Q9ULD4 1205 aa11.5□□□□□ -0.57
USP13-203ENST00000496897 WASHC2AQ641Q2 1341 aa11.48□□□□□ -0.57
USP13-203ENST00000496897 LAMC3Q9Y6N6 1575 aa11.48□□□□□ -0.57
USP13-203ENST00000496897 KCNH8Q96L42 1107 aa11.47□□□□□ -0.57
USP13-203ENST00000496897 WASHC2CQ9Y4E1 1318 aa11.47□□□□□ -0.57
USP13-203ENST00000496897 MROH2BQ7Z745 1585 aa11.47□□□□□ -0.57
USP13-203ENST00000496897 TAF7LQ5H9L4 462 aa11.41□□□□□ -0.58
USP13-203ENST00000496897 EHMT2Q96KQ7 1210 aa11.41□□□□□ -0.58
USP13-203ENST00000496897 ERCC6Q03468 1493 aa11.41□□□□□ -0.58
USP13-203ENST00000496897 RANGAP1P46060 587 aaPredicted RBP11.41□□□□□ -0.58
USP13-203ENST00000496897 THOC2Q8NI27 1593 aaKnown RBP11.39□□□□□ -0.59
USP13-203ENST00000496897 NEFMP07197 916 aa11.38□□□□□ -0.59
USP13-203ENST00000496897 NCBP3Q53F19 620 aaKnown RBP11.38□□□□□ -0.59
USP13-203ENST00000496897 HSP90AA2PQ14568 343 aaPredicted RBP11.38□□□□□ -0.59
USP13-203ENST00000496897 ZBTB47Q9UFB7 747 aaPredicted RBP11.37□□□□□ -0.59
USP13-203ENST00000496897 IPO9Q96P70 1041 aaKnown RBP11.36□□□□□ -0.59
USP13-203ENST00000496897 USP35Q9P2H5 1018 aa11.36□□□□□ -0.59
USP13-203ENST00000496897 FAM43AQ8N2R8 423 aa11.35□□□□□ -0.59
USP13-203ENST00000496897 RRP9O43818 475 aaKnown RBP11.35□□□□□ -0.59
USP13-203ENST00000496897 NESP48681 1621 aa11.34□□□□□ -0.59
USP13-203ENST00000496897 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
USP13-203ENST00000496897 WIZO95785 1651 aa11.32□□□□□ -0.6
USP13-203ENST00000496897 ANP32AP39687 249 aaKnown RBP11.32□□□□□ -0.6
USP13-203ENST00000496897 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
USP13-203ENST00000496897 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
USP13-203ENST00000496897 DNAJC5Q9H3Z4 198 aa11.3□□□□□ -0.6
USP13-203ENST00000496897 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
USP13-203ENST00000496897 IRX6P78412 446 aaPredicted RBP11.29□□□□□ -0.6
USP13-203ENST00000496897 TRIM52Q96A61 297 aa11.29□□□□□ -0.6
USP13-203ENST00000496897 ARXQ96QS3 562 aa11.29□□□□□ -0.6
USP13-203ENST00000496897 GSE1Q14687 1217 aa11.28□□□□□ -0.6
USP13-203ENST00000496897 PAXIP1Q6ZW49 1069 aaPredicted RBP11.27□□□□□ -0.61
USP13-203ENST00000496897 WDR62O43379 1518 aa11.27□□□□□ -0.61
USP13-203ENST00000496897 RSF1Q96T23 1441 aaPredicted RBP11.27□□□□□ -0.61
USP13-203ENST00000496897 MRC2Q9UBG0 1479 aa11.26□□□□□ -0.61
USP13-203ENST00000496897 HSP90AA1P07900 732 aaKnown RBP11.25□□□□□ -0.61
USP13-203ENST00000496897 PRDM4Q9UKN5 801 aa11.25□□□□□ -0.61
USP13-203ENST00000496897 LAS1LQ9Y4W2 734 aaKnown RBP11.25□□□□□ -0.61
USP13-203ENST00000496897 PRDM2Q13029 1718 aa11.25□□□□□ -0.61
USP13-203ENST00000496897 PPP4R2Q9NY27 417 aa11.24□□□□□ -0.61
USP13-203ENST00000496897 NAP1L2Q9ULW6 460 aaPredicted RBP11.24□□□□□ -0.61
USP13-203ENST00000496897 CFTRP13569 1480 aa11.23□□□□□ -0.61
USP13-203ENST00000496897 BBXQ8WY36 941 aaPredicted RBP11.22□□□□□ -0.61
USP13-203ENST00000496897 RGS3P49796 1198 aa11.21□□□□□ -0.62
USP13-203ENST00000496897 CHMP4BQ9H444 224 aaKnown RBP11.2□□□□□ -0.62
USP13-203ENST00000496897 FRAT1Q92837 279 aaPredicted RBP11.19□□□□□ -0.62
USP13-203ENST00000496897 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
USP13-203ENST00000496897 PPM1GO15355 546 aaPredicted RBP11.18□□□□□ -0.62
USP13-203ENST00000496897 CALD1Q05682 793 aaKnown RBP11.18□□□□□ -0.62
USP13-203ENST00000496897 RSPH4AQ5TD94 716 aa11.18□□□□□ -0.62
USP13-203ENST00000496897 NAP1L5Q96NT1 182 aaPredicted RBP11.18□□□□□ -0.62
USP13-203ENST00000496897 B4GALNT3Q6L9W6 998 aa11.18□□□□□ -0.62
USP13-203ENST00000496897 RRAGDQ9NQL2 400 aaPredicted RBP11.16□□□□□ -0.62
USP13-203ENST00000496897 GTF2E1P29083 439 aaPredicted RBP11.16□□□□□ -0.62
USP13-203ENST00000496897 DCAF11Q8TEB1 546 aa11.16□□□□□ -0.62
USP13-203ENST00000496897 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
USP13-203ENST00000496897 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.62
USP13-203ENST00000496897 ZNF326Q5BKZ1 582 aaKnown RBP11.13□□□□□ -0.63
USP13-203ENST00000496897 DHX37Q8IY37 1157 aaKnown RBP11.13□□□□□ -0.63
USP13-203ENST00000496897 IPO4Q8TEX9 1081 aaKnown RBP11.11□□□□□ -0.63
USP13-203ENST00000496897 WRNQ14191 1432 aaPredicted RBP eCLIP11.11□□□□□ -0.63
USP13-203ENST00000496897 STAC3Q96MF2 364 aa11.1□□□□□ -0.63
USP13-203ENST00000496897 CENPJQ9HC77 1338 aaPredicted RBP11.1□□□□□ -0.63
USP13-203ENST00000496897 CANXP27824 592 aaKnown RBP11.09□□□□□ -0.63
USP13-203ENST00000496897 PNNQ9H307 717 aaKnown RBP11.09□□□□□ -0.63
USP13-203ENST00000496897 CCER2I3L3R5 266 aa11.09□□□□□ -0.63
USP13-203ENST00000496897 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
USP13-203ENST00000496897 PDCL3Q9H2J4 239 aa11.08□□□□□ -0.64
USP13-203ENST00000496897 URB2Q14146 1524 aaKnown RBP11.07□□□□□ -0.64
USP13-203ENST00000496897 CHMP4AQ9BY43 222 aa11.07□□□□□ -0.64
USP13-203ENST00000496897 CCDC88BA6NC98 1476 aa11.07□□□□□ -0.64
USP13-203ENST00000496897 DDX10Q13206 875 aaKnown RBP11.07□□□□□ -0.64
USP13-203ENST00000496897 NFKBIBQ15653 356 aa11.07□□□□□ -0.64
USP13-203ENST00000496897 ABCC8Q09428 1581 aa11.06□□□□□ -0.64
USP13-203ENST00000496897 NPM2Q86SE8 214 aaKnown RBP11.06□□□□□ -0.64
USP13-203ENST00000496897 CNGB1Q14028 1251 aaPredicted RBP11.03□□□□□ -0.64
USP13-203ENST00000496897 FOXD1Q16676 465 aa11.01□□□□□ -0.65
USP13-203ENST00000496897 CLCN1P35523 988 aa11.01□□□□□ -0.65
USP13-203ENST00000496897 HNRNPUQ00839 825 aaKnown RBP eCLIP11.01□□□□□ -0.65
USP13-203ENST00000496897 IFT140Q96RY7 1462 aa11.01□□□□□ -0.65
USP13-203ENST00000496897 DNMBPQ6XZF7 1577 aa11□□□□□ -0.65
USP13-203ENST00000496897 EEA1Q15075 1411 aa11□□□□□ -0.65
USP13-203ENST00000496897 ARID4BQ4LE39 1312 aaPredicted RBP11□□□□□ -0.65
USP13-203ENST00000496897 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
USP13-203ENST00000496897 ANP32CO43423 234 aa10.99□□□□□ -0.65
USP13-203ENST00000496897 WDR97A6NE52 1622 aa10.99□□□□□ -0.65
USP13-203ENST00000496897 TOPBP1Q92547 1522 aa10.98□□□□□ -0.65
USP13-203ENST00000496897 PPP1R15AO75807 674 aaPredicted RBP10.96□□□□□ -0.65
USP13-203ENST00000496897 FTSJ3Q8IY81 847 aaKnown RBP10.96□□□□□ -0.65
USP13-203ENST00000496897 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
USP13-203ENST00000496897 DHX57Q6P158 1386 aaKnown RBP10.96□□□□□ -0.66
USP13-203ENST00000496897 ZHX1Q9UKY1 873 aaPredicted RBP10.96□□□□□ -0.66
USP13-203ENST00000496897 SAMD1Q6SPF0 538 aaPredicted RBP10.94□□□□□ -0.66
USP13-203ENST00000496897 DDRGK1Q96HY6 314 aa10.94□□□□□ -0.66
USP13-203ENST00000496897 NCLP19338 710 aaKnown RBP10.93□□□□□ -0.66
USP13-203ENST00000496897 ZNF830Q96NB3 372 aaPredicted RBP10.93□□□□□ -0.66
USP13-203ENST00000496897 SIN3AQ96ST3 1273 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms