RNA–Protein interactions for RNA: ENST00000496897.5

USP13-203, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 2 BASIC

Gene USP13, Length 2,747 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-203ENST00000496897 NISCHQ9Y2I1 1504 aa14.98□□□□□ -0.01
USP13-203ENST00000496897 PELP1Q8IZL8 1130 aaKnown RBP14.93□□□□□ -0.02
USP13-203ENST00000496897 MYT1Q01538 1121 aa14.61□□□□□ -0.07
USP13-203ENST00000496897 HRCP23327 699 aa14.1□□□□□ -0.15
USP13-203ENST00000496897 TTBK1Q5TCY1 1321 aaPredicted RBP13.99□□□□□ -0.17
USP13-203ENST00000496897 SCAF1Q9H7N4 1312 aaKnown RBP13.83□□□□□ -0.2
USP13-203ENST00000496897 PPARGC1BQ86YN6 1023 aaKnown RBP13.77□□□□□ -0.21
USP13-203ENST00000496897 PRKCSHP14314 528 aaPredicted RBP13.73□□□□□ -0.21
USP13-203ENST00000496897 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
USP13-203ENST00000496897 BCL11AQ9H165 835 aa13.56□□□□□ -0.24
USP13-203ENST00000496897 FAM9AQ8IZU1 332 aaPredicted RBP13.41□□□□□ -0.26
USP13-203ENST00000496897 ERICH6Q7L0X2 663 aa13.38□□□□□ -0.27
USP13-203ENST00000496897 PCGF6Q9BYE7 350 aa13.38□□□□□ -0.27
USP13-203ENST00000496897 APLP2Q06481 763 aa13.33□□□□□ -0.27
USP13-203ENST00000496897 CENPBP07199 599 aaPredicted RBP13.23□□□□□ -0.29
USP13-203ENST00000496897 ACIN1Q9UKV3 1341 aaKnown RBP13.22□□□□□ -0.29
USP13-203ENST00000496897 ABCC9O60706 1549 aa13.18□□□□□ -0.3
USP13-203ENST00000496897 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
USP13-203ENST00000496897 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
USP13-203ENST00000496897 ZEB1P37275 1124 aaPredicted RBP12.97□□□□□ -0.33
USP13-203ENST00000496897 SLC24A1O60721 1099 aa12.96□□□□□ -0.33
USP13-203ENST00000496897 ANP32EQ9BTT0 268 aa12.96□□□□□ -0.33
USP13-203ENST00000496897 MYO15BQ96JP2 1530 aa12.89□□□□□ -0.35
USP13-203ENST00000496897 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
USP13-203ENST00000496897 RB1CC1Q8TDY2 1594 aa12.78□□□□□ -0.36
USP13-203ENST00000496897 NACADO15069 1562 aa12.75□□□□□ -0.37
USP13-203ENST00000496897 TRIM26Q12899 539 aaPredicted RBP12.71□□□□□ -0.37
USP13-203ENST00000496897 DCAF1Q9Y4B6 1507 aa12.65□□□□□ -0.38
USP13-203ENST00000496897 ANO8Q9HCE9 1232 aaPredicted RBP12.62□□□□□ -0.39
USP13-203ENST00000496897 EIF5BO60841 1220 aaKnown RBP12.59□□□□□ -0.39
USP13-203ENST00000496897 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
USP13-203ENST00000496897 DIEXFQ68CQ4 756 aaKnown RBP12.52□□□□□ -0.41
USP13-203ENST00000496897 UBE2Q2Q8WVN8 375 aa12.51□□□□□ -0.41
USP13-203ENST00000496897 TSHZ2Q9NRE2 1034 aa12.5□□□□□ -0.41
USP13-203ENST00000496897 ZCCHC6Q5VYS8 1495 aaKnown RBP12.47□□□□□ -0.41
USP13-203ENST00000496897 UNC13AQ9UPW8 1703 aa12.46□□□□□ -0.41
USP13-203ENST00000496897 CHIC1Q5VXU3 224 aa12.44□□□□□ -0.42
USP13-203ENST00000496897 SHROOM4Q9ULL8 1493 aa12.44□□□□□ -0.42
USP13-203ENST00000496897 YTHDC1Q96MU7 727 aaKnown RBP12.41□□□□□ -0.42
USP13-203ENST00000496897 BICRAQ9NZM4 1560 aa12.37□□□□□ -0.43
USP13-203ENST00000496897 PLEKHG5O94827 1062 aa12.37□□□□□ -0.43
USP13-203ENST00000496897 SALL2Q9Y467 1007 aaPredicted RBP12.36□□□□□ -0.43
USP13-203ENST00000496897 SUPT5HO00267 1087 aaKnown RBP12.34□□□□□ -0.43
USP13-203ENST00000496897 CCDC136Q96JN2 1154 aa12.32□□□□□ -0.44
USP13-203ENST00000496897 SUPT16HQ9Y5B9 1047 aaKnown RBP12.31□□□□□ -0.44
USP13-203ENST00000496897 LOC105371045A0A1W2PR82 267 aa12.26□□□□□ -0.45
USP13-203ENST00000496897 PKNOX2Q96KN3 472 aa12.24□□□□□ -0.45
USP13-203ENST00000496897 DNAJC5BQ9UF47 199 aa12.24□□□□□ -0.45
USP13-203ENST00000496897 CLSPNQ9HAW4 1339 aa12.23□□□□□ -0.45
USP13-203ENST00000496897 DCAF8L2P0C7V8 631 aa12.21□□□□□ -0.45
USP13-203ENST00000496897 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
USP13-203ENST00000496897 PODXL2Q9NZ53 605 aa12.2□□□□□ -0.46
USP13-203ENST00000496897 ERICH6BQ5W0A0 696 aa12.19□□□□□ -0.46
USP13-203ENST00000496897 PABPN1Q86U42 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
USP13-203ENST00000496897 DEKP35659 375 aaKnown RBP12.15□□□□□ -0.46
USP13-203ENST00000496897 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
USP13-203ENST00000496897 RBM19Q9Y4C8 960 aaKnown RBP12.12□□□□□ -0.47
USP13-203ENST00000496897 SCRIBQ14160 1630 aa12.12□□□□□ -0.47
USP13-203ENST00000496897 MSH5O43196 834 aa12.11□□□□□ -0.47
USP13-203ENST00000496897 MIER1Q8N108 512 aa12.11□□□□□ -0.47
USP13-203ENST00000496897 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.11□□□□□ -0.47
USP13-203ENST00000496897 CCER1Q8TC90 406 aaPredicted RBP12.09□□□□□ -0.47
USP13-203ENST00000496897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.09□□□□□ -0.47
USP13-203ENST00000496897 ZNF316A6NFI3 1004 aaPredicted RBP12.05□□□□□ -0.48
USP13-203ENST00000496897 EIF4G1Q04637 1599 aaKnown RBP12.04□□□□□ -0.48
USP13-203ENST00000496897 CC2D2AQ9P2K1 1620 aa12.03□□□□□ -0.48
USP13-203ENST00000496897 CECR2Q9BXF3 1484 aa11.94□□□□□ -0.5
USP13-203ENST00000496897 IL27Q8NEV9 243 aa11.93□□□□□ -0.5
USP13-203ENST00000496897 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
USP13-203ENST00000496897 BCANQ96GW7 911 aa11.92□□□□□ -0.5
USP13-203ENST00000496897 FANCIQ9NVI1 1328 aa11.9□□□□□ -0.5
USP13-203ENST00000496897 NEFLP07196 543 aa11.82□□□□□ -0.52
USP13-203ENST00000496897 FKBP8Q14318 412 aa11.79□□□□□ -0.52
USP13-203ENST00000496897 ZMYND15Q9H091 742 aa11.79□□□□□ -0.52
USP13-203ENST00000496897 NBR1Q14596 966 aa11.76□□□□□ -0.53
USP13-203ENST00000496897 ITGAEP38570 1179 aa11.74□□□□□ -0.53
USP13-203ENST00000496897 GLIPR1L2Q4G1C9 344 aa11.74□□□□□ -0.53
USP13-203ENST00000496897 PDE4CQ08493 712 aa11.73□□□□□ -0.53
USP13-203ENST00000496897 NCAPD3P42695 1498 aa11.72□□□□□ -0.53
USP13-203ENST00000496897 VSIG10Q8N0Z9 540 aa11.71□□□□□ -0.53
USP13-203ENST00000496897 HMGXB3Q12766 1538 aa11.7□□□□□ -0.54
USP13-203ENST00000496897 TIMELESSQ9UNS1 1208 aa11.7□□□□□ -0.54
USP13-203ENST00000496897 A0A0U1RQG5 324 aaPredicted RBP11.69□□□□□ -0.54
USP13-203ENST00000496897 SMARCA2P51531 1590 aa11.69□□□□□ -0.54
USP13-203ENST00000496897 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
USP13-203ENST00000496897 FGD1P98174 961 aa11.68□□□□□ -0.54
USP13-203ENST00000496897 PEG3Q9GZU2 1588 aa11.68□□□□□ -0.54
USP13-203ENST00000496897 PDIA4P13667 645 aaKnown RBP11.67□□□□□ -0.54
USP13-203ENST00000496897 BAZ1AQ9NRL2 1556 aaPredicted RBP11.65□□□□□ -0.54
USP13-203ENST00000496897 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
USP13-203ENST00000496897 RTL5Q5HYW3 569 aaPredicted RBP11.63□□□□□ -0.55
USP13-203ENST00000496897 AAMPQ13685 434 aa11.62□□□□□ -0.55
USP13-203ENST00000496897 NOP58Q9Y2X3 529 aaKnown RBP11.62□□□□□ -0.55
USP13-203ENST00000496897 RBM10P98175 930 aaKnown RBP11.61□□□□□ -0.55
USP13-203ENST00000496897 AEBP2Q6ZN18 517 aaPredicted RBP11.61□□□□□ -0.55
USP13-203ENST00000496897 CDK11AQ9UQ88 783 aaPredicted RBP11.61□□□□□ -0.55
USP13-203ENST00000496897 RSPH6AQ9H0K4 717 aa11.6□□□□□ -0.55
USP13-203ENST00000496897 BCL11BQ9C0K0 894 aaPredicted RBP11.59□□□□□ -0.55
USP13-203ENST00000496897 C11orf95C9JLR9 678 aaPredicted RBP11.58□□□□□ -0.56
USP13-203ENST00000496897 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms