RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 MS4A3Q96HJ5 214 aa15.36■□□□□ 0.05
SRRM1-219ENST00000495561 ZBTB47Q9UFB7 747 aaPredicted RBP15.3■□□□□ 0.04
SRRM1-219ENST00000495561 KIF12Q96FN5 646 aa15.28■□□□□ 0.04
SRRM1-219ENST00000495561 FBXO3Q9UK99 471 aa15.27■□□□□ 0.04
SRRM1-219ENST00000495561 NUBP1P53384 320 aa15.26■□□□□ 0.03
SRRM1-219ENST00000495561 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
SRRM1-219ENST00000495561 ASTLQ6HA08 431 aaPredicted RBP15.22■□□□□ 0.03
SRRM1-219ENST00000495561 MAP3K13O43283 966 aa15.2■□□□□ 0.02
SRRM1-219ENST00000495561 ATMINO43313 823 aaPredicted RBP15.19■□□□□ 0.02
SRRM1-219ENST00000495561 TRPC6Q9Y210 931 aa15.14■□□□□ 0.01
SRRM1-219ENST00000495561 FAM212AQ96EL1 285 aa15.13■□□□□ 0.01
SRRM1-219ENST00000495561 VASPP50552 380 aaPredicted RBP15.11■□□□□ 0.01
SRRM1-219ENST00000495561 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
SRRM1-219ENST00000495561 ATN1P54259 1190 aaPredicted RBP15.09■□□□□ 0.01
SRRM1-219ENST00000495561 BMP2KQ9NSY1 1161 aaPredicted RBP15.09■□□□□ 0.01
SRRM1-219ENST00000495561 METRNQ9UJH8 293 aa15.09■□□□□ 0.01
SRRM1-219ENST00000495561 SLC39A7Q92504 469 aa15.08■□□□□ 0
SRRM1-219ENST00000495561 C7P10643 843 aa15.06■□□□□ 0
SRRM1-219ENST00000495561 PCDHB13Q9Y5F0 798 aa15.06■□□□□ 0
SRRM1-219ENST00000495561 TIE1P35590 1138 aa15.05■□□□□ -0
SRRM1-219ENST00000495561 SGIP1Q9BQI5 828 aa15.05■□□□□ -0
SRRM1-219ENST00000495561 DCAF8Q5TAQ9 597 aa15.01□□□□□ -0.01
SRRM1-219ENST00000495561 KLHL34Q8N239 644 aa15□□□□□ -0.01
SRRM1-219ENST00000495561 OTUD5Q96G74 571 aa15□□□□□ -0.01
SRRM1-219ENST00000495561 IFNL1Q8IU54 200 aa14.99□□□□□ -0.01
SRRM1-219ENST00000495561 TTLL13PA6NNM8 815 aa14.98□□□□□ -0.01
SRRM1-219ENST00000495561 PYGBP11216 843 aa14.94□□□□□ -0.02
SRRM1-219ENST00000495561 POTEJP0CG39 1038 aa14.92□□□□□ -0.02
SRRM1-219ENST00000495561 POTEFA5A3E0 1075 aa14.9□□□□□ -0.02
SRRM1-219ENST00000495561 TRIM35Q9UPQ4 493 aa14.88□□□□□ -0.03
SRRM1-219ENST00000495561 GSE1Q14687 1217 aa14.86□□□□□ -0.03
SRRM1-219ENST00000495561 TMEM106CQ9BVX2 250 aa14.86□□□□□ -0.03
SRRM1-219ENST00000495561 IFNLR1Q8IU57 520 aaPredicted RBP14.85□□□□□ -0.03
SRRM1-219ENST00000495561 COLQQ9Y215 455 aaPredicted RBP14.83□□□□□ -0.04
SRRM1-219ENST00000495561 PCDHB8Q9UN66 801 aa14.82□□□□□ -0.04
SRRM1-219ENST00000495561 IER5LQ5T953 404 aa14.81□□□□□ -0.04
SRRM1-219ENST00000495561 SEC24BO95487 1268 aa14.8□□□□□ -0.04
SRRM1-219ENST00000495561 MAMSTRQ6ZN01 415 aa14.8□□□□□ -0.04
SRRM1-219ENST00000495561 SPOCK2Q92563 424 aa14.79□□□□□ -0.04
SRRM1-219ENST00000495561 CHRM1P11229 460 aaPredicted RBP14.74□□□□□ -0.05
SRRM1-219ENST00000495561 SCUBE2Q9NQ36 999 aa14.74□□□□□ -0.05
SRRM1-219ENST00000495561 ZNF467Q7Z7K2 595 aaPredicted RBP14.71□□□□□ -0.05
SRRM1-219ENST00000495561 CIZ1Q9ULV3 898 aaPredicted RBP14.68□□□□□ -0.06
SRRM1-219ENST00000495561 IRX5P78411 483 aaPredicted RBP14.66□□□□□ -0.06
SRRM1-219ENST00000495561 PLCG2P16885 1265 aa14.65□□□□□ -0.06
SRRM1-219ENST00000495561 PSEN1P49768 467 aa14.59□□□□□ -0.07
SRRM1-219ENST00000495561 OCEL1Q9H607 264 aa14.59□□□□□ -0.07
SRRM1-219ENST00000495561 PDAP1Q13442 181 aaKnown RBP14.53□□□□□ -0.08
SRRM1-219ENST00000495561 POTEMA6NI47 508 aa14.52□□□□□ -0.09
SRRM1-219ENST00000495561 GOLGA2Q08379 1002 aa14.52□□□□□ -0.09
SRRM1-219ENST00000495561 MKRN3Q13064 507 aaKnown RBP14.5□□□□□ -0.09
SRRM1-219ENST00000495561 LCE2DQ5TA82 110 aaPredicted RBP14.5□□□□□ -0.09
SRRM1-219ENST00000495561 POTEGQ6S5H5 508 aa14.5□□□□□ -0.09
SRRM1-219ENST00000495561 PDCD7Q8N8D1 485 aaKnown RBP14.49□□□□□ -0.09
SRRM1-219ENST00000495561 FAM163AQ96GL9 167 aaPredicted RBP14.49□□□□□ -0.09
SRRM1-219ENST00000495561 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
SRRM1-219ENST00000495561 SLAIN1Q8ND83 568 aa14.47□□□□□ -0.09
SRRM1-219ENST00000495561 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.42□□□□□ -0.12e-8■■■□□ 16.7
SRRM1-219ENST00000495561 CABP2Q9NPB3 220 aa14.41□□□□□ -0.1
SRRM1-219ENST00000495561 ILDR1Q86SU0 546 aaPredicted RBP14.37□□□□□ -0.11
SRRM1-219ENST00000495561 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.37□□□□□ -0.11
SRRM1-219ENST00000495561 L3MBTL3Q96JM7 780 aaPredicted RBP14.35□□□□□ -0.11
SRRM1-219ENST00000495561 RNF25Q96BH1 459 aaPredicted RBP14.32□□□□□ -0.12
SRRM1-219ENST00000495561 DPY19L2Q6NUT2 758 aa14.31□□□□□ -0.12
SRRM1-219ENST00000495561 PLSCR2Q9NRY7 297 aa14.31□□□□□ -0.12
SRRM1-219ENST00000495561 RIOK3O14730 519 aaKnown RBP14.3□□□□□ -0.12
SRRM1-219ENST00000495561 C3orf67Q6ZVT6 689 aa14.3□□□□□ -0.12
SRRM1-219ENST00000495561 ST18O60284 1047 aa14.27□□□□□ -0.13
SRRM1-219ENST00000495561 EFCAB3Q8N7B9 438 aa14.26□□□□□ -0.13
SRRM1-219ENST00000495561 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
SRRM1-219ENST00000495561 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.23□□□□□ -0.13
SRRM1-219ENST00000495561 ZFP91Q96JP5 570 aaPredicted RBP14.23□□□□□ -0.13
SRRM1-219ENST00000495561 VGFO15240 615 aaPredicted RBP14.22□□□□□ -0.13
SRRM1-219ENST00000495561 BOLA1Q9Y3E2 137 aa14.21□□□□□ -0.13
SRRM1-219ENST00000495561 SNPHO15079 494 aa14.2□□□□□ -0.14
SRRM1-219ENST00000495561 G3V3G9 751 aa14.16□□□□□ -0.14
SRRM1-219ENST00000495561 SOX12O15370 315 aa14.12□□□□□ -0.15
SRRM1-219ENST00000495561 TMEM121BQ9BXQ6 578 aaPredicted RBP14.12□□□□□ -0.15
SRRM1-219ENST00000495561 ECM2O94769 699 aaPredicted RBP14.11□□□□□ -0.15
SRRM1-219ENST00000495561 CDAN1Q8IWY9 1227 aa14.1□□□□□ -0.15
SRRM1-219ENST00000495561 PKD2Q13563 968 aa14.08□□□□□ -0.16
SRRM1-219ENST00000495561 MS4A4AQ96JQ5 239 aa14.08□□□□□ -0.16
SRRM1-219ENST00000495561 TAOK2Q9UL54 1235 aa14.08□□□□□ -0.16
SRRM1-219ENST00000495561 PHF8Q9UPP1 1060 aa14.08□□□□□ -0.16
SRRM1-219ENST00000495561 BCL11BQ9C0K0 894 aaPredicted RBP14.07□□□□□ -0.16
SRRM1-219ENST00000495561 MARVELD3Q96A59 401 aa14.05□□□□□ -0.16
SRRM1-219ENST00000495561 MICALL2Q8IY33 904 aa14.04□□□□□ -0.16
SRRM1-219ENST00000495561 STK24Q9Y6E0 443 aa14.02□□□□□ -0.17
SRRM1-219ENST00000495561 RGL2O15211 777 aa14.01□□□□□ -0.17
SRRM1-219ENST00000495561 STK25O00506 426 aa13.99□□□□□ -0.17
SRRM1-219ENST00000495561 HOXB3P14651 431 aaPredicted RBP13.99□□□□□ -0.17
SRRM1-219ENST00000495561 NLRP6P59044 892 aa13.97□□□□□ -0.17
SRRM1-219ENST00000495561 FBXO22Q8NEZ5 403 aa13.97□□□□□ -0.17
SRRM1-219ENST00000495561 EMP3P54852 163 aa13.96□□□□□ -0.17
SRRM1-219ENST00000495561 TMEM92Q6UXU6 159 aa13.96□□□□□ -0.17
SRRM1-219ENST00000495561 MFRPQ9BY79 579 aa13.93□□□□□ -0.18
SRRM1-219ENST00000495561 DOK7Q18PE1 504 aa13.89□□□□□ -0.19
SRRM1-219ENST00000495561 ZNF710Q8N1W2 664 aa13.88□□□□□ -0.19
SRRM1-219ENST00000495561 POTEB3A0JP26 581 aa13.87□□□□□ -0.19
SRRM1-219ENST00000495561 POTEBQ6S5H4 581 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms