RNA–Protein interactions for RNA: ENST00000495178.1

ATXN1-209, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-209ENST00000495178 ASTLQ6HA08 431 aaPredicted RBP12.04□□□□□ -0.48
ATXN1-209ENST00000495178 MS4A3Q96HJ5 214 aa12.02□□□□□ -0.49
ATXN1-209ENST00000495178 ATMINO43313 823 aaPredicted RBP11.99□□□□□ -0.49
ATXN1-209ENST00000495178 SLC39A7Q92504 469 aa11.99□□□□□ -0.49
ATXN1-209ENST00000495178 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
ATXN1-209ENST00000495178 C7P10643 843 aa11.98□□□□□ -0.49
ATXN1-209ENST00000495178 PROM2Q8N271 834 aa11.95□□□□□ -0.5
ATXN1-209ENST00000495178 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
ATXN1-209ENST00000495178 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
ATXN1-209ENST00000495178 MAMSTRQ6ZN01 415 aa11.91□□□□□ -0.5
ATXN1-209ENST00000495178 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
ATXN1-209ENST00000495178 ATN1P54259 1190 aaPredicted RBP11.86□□□□□ -0.51
ATXN1-209ENST00000495178 KIF12Q96FN5 646 aa11.85□□□□□ -0.51
ATXN1-209ENST00000495178 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
ATXN1-209ENST00000495178 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
ATXN1-209ENST00000495178 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
ATXN1-209ENST00000495178 BMP2KQ9NSY1 1161 aaPredicted RBP11.78□□□□□ -0.52
ATXN1-209ENST00000495178 MAP3K13O43283 966 aa11.76□□□□□ -0.53
ATXN1-209ENST00000495178 TIE1P35590 1138 aa11.76□□□□□ -0.53
ATXN1-209ENST00000495178 FAM163AQ96GL9 167 aaPredicted RBP11.75□□□□□ -0.53
ATXN1-209ENST00000495178 TRPC6Q9Y210 931 aa11.75□□□□□ -0.53
ATXN1-209ENST00000495178 MIER1Q8N108 512 aa11.74□□□□□ -0.53
ATXN1-209ENST00000495178 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
ATXN1-209ENST00000495178 TTLL13PA6NNM8 815 aa11.67□□□□□ -0.54
ATXN1-209ENST00000495178 SEC24BO95487 1268 aa11.65□□□□□ -0.54
ATXN1-209ENST00000495178 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
ATXN1-209ENST00000495178 COLQQ9Y215 455 aaPredicted RBP11.65□□□□□ -0.54
ATXN1-209ENST00000495178 IER5LQ5T953 404 aa11.62□□□□□ -0.55
ATXN1-209ENST00000495178 PLCD3Q8N3E9 789 aa11.61□□□□□ -0.55
ATXN1-209ENST00000495178 PCDHB13Q9Y5F0 798 aa11.6□□□□□ -0.55
ATXN1-209ENST00000495178 ZBTB47Q9UFB7 747 aaPredicted RBP11.59□□□□□ -0.55
ATXN1-209ENST00000495178 TRIM35Q9UPQ4 493 aa11.59□□□□□ -0.55
ATXN1-209ENST00000495178 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
ATXN1-209ENST00000495178 NUBP1P53384 320 aa11.56□□□□□ -0.56
ATXN1-209ENST00000495178 IFNL1Q8IU54 200 aa11.52□□□□□ -0.57
ATXN1-209ENST00000495178 FAM212AQ96EL1 285 aa11.49□□□□□ -0.57
ATXN1-209ENST00000495178 TMEM106CQ9BVX2 250 aa11.48□□□□□ -0.57
ATXN1-209ENST00000495178 ST18O60284 1047 aa11.47□□□□□ -0.57
ATXN1-209ENST00000495178 SLAIN1Q8ND83 568 aa11.47□□□□□ -0.57
ATXN1-209ENST00000495178 PLCG2P16885 1265 aa11.45□□□□□ -0.58
ATXN1-209ENST00000495178 IRX5P78411 483 aaPredicted RBP11.42□□□□□ -0.58
ATXN1-209ENST00000495178 MMRN1Q13201 1228 aa11.38□□□□□ -0.59
ATXN1-209ENST00000495178 OCEL1Q9H607 264 aa11.36□□□□□ -0.59
ATXN1-209ENST00000495178 SPNS2Q8IVW8 549 aa11.35□□□□□ -0.59
ATXN1-209ENST00000495178 DCAF8Q5TAQ9 597 aa11.33□□□□□ -0.6
ATXN1-209ENST00000495178 TMEM121BQ9BXQ6 578 aaPredicted RBP11.32□□□□□ -0.6
ATXN1-209ENST00000495178 SNPHO15079 494 aa11.31□□□□□ -0.6
ATXN1-209ENST00000495178 PYGBP11216 843 aa11.31□□□□□ -0.6
ATXN1-209ENST00000495178 FKBP8Q14318 412 aa11.3□□□□□ -0.6
ATXN1-209ENST00000495178 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.29□□□□□ -0.6
ATXN1-209ENST00000495178 PCDHB8Q9UN66 801 aa11.28□□□□□ -0.6
ATXN1-209ENST00000495178 FBXO3Q9UK99 471 aa11.22□□□□□ -0.61
ATXN1-209ENST00000495178 PDCD7Q8N8D1 485 aaKnown RBP11.2□□□□□ -0.62
ATXN1-209ENST00000495178 ZNF467Q7Z7K2 595 aaPredicted RBP11.19□□□□□ -0.62
ATXN1-209ENST00000495178 MARVELD3Q96A59 401 aa11.19□□□□□ -0.62
ATXN1-209ENST00000495178 GSE1Q14687 1217 aa11.17□□□□□ -0.62
ATXN1-209ENST00000495178 GOLGA2Q08379 1002 aa11.16□□□□□ -0.62
ATXN1-209ENST00000495178 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
ATXN1-209ENST00000495178 L3MBTL3Q96JM7 780 aaPredicted RBP11.16□□□□□ -0.62
ATXN1-209ENST00000495178 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
ATXN1-209ENST00000495178 MKRN3Q13064 507 aaKnown RBP11.15□□□□□ -0.62
ATXN1-209ENST00000495178 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
ATXN1-209ENST00000495178 KRTAP3-3Q9BYR6 98 aa11.14□□□□□ -0.63
ATXN1-209ENST00000495178 KRTAP3-2Q9BYR7 98 aa11.14□□□□□ -0.63
ATXN1-209ENST00000495178 CHRM1P11229 460 aaPredicted RBP11.13□□□□□ -0.63
ATXN1-209ENST00000495178 EMP3P54852 163 aa11.1□□□□□ -0.63
ATXN1-209ENST00000495178 KLHL34Q8N239 644 aa11.1□□□□□ -0.63
ATXN1-209ENST00000495178 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.1□□□□□ -0.63
ATXN1-209ENST00000495178 PSEN1P49768 467 aa11.08□□□□□ -0.64
ATXN1-209ENST00000495178 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
ATXN1-209ENST00000495178 ILDR1Q86SU0 546 aaPredicted RBP11.06□□□□□ -0.64
ATXN1-209ENST00000495178 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
ATXN1-209ENST00000495178 PDAP1Q13442 181 aaKnown RBP11.01□□□□□ -0.65
ATXN1-209ENST00000495178 FAM205CA6NFA0 338 aa11□□□□□ -0.65
ATXN1-209ENST00000495178 DPY19L2Q6NUT2 758 aa10.96□□□□□ -0.65
ATXN1-209ENST00000495178 G3V3G9 751 aa10.94□□□□□ -0.66
ATXN1-209ENST00000495178 CABP2Q9NPB3 220 aa10.94□□□□□ -0.66
ATXN1-209ENST00000495178 BOLA1Q9Y3E2 137 aa10.94□□□□□ -0.66
ATXN1-209ENST00000495178 HOXB3P14651 431 aaPredicted RBP10.93□□□□□ -0.66
ATXN1-209ENST00000495178 HOXB1P14653 301 aaPredicted RBP10.89□□□□□ -0.67
ATXN1-209ENST00000495178 SPOCK2Q92563 424 aa10.88□□□□□ -0.67
ATXN1-209ENST00000495178 ZNF710Q8N1W2 664 aa10.87□□□□□ -0.67
ATXN1-209ENST00000495178 CIZ1Q9ULV3 898 aaPredicted RBP10.87□□□□□ -0.67
ATXN1-209ENST00000495178 DOK7Q18PE1 504 aa10.86□□□□□ -0.67
ATXN1-209ENST00000495178 IFNLR1Q8IU57 520 aaPredicted RBP10.84□□□□□ -0.67
ATXN1-209ENST00000495178 ERBB3P21860 1342 aa10.83□□□□□ -0.68
ATXN1-209ENST00000495178 RIMBP2O15034 1052 aa10.79□□□□□ -0.68
ATXN1-209ENST00000495178 EFCAB3Q8N7B9 438 aa10.77□□□□□ -0.69
ATXN1-209ENST00000495178 TRIM41Q8WV44 630 aa10.75□□□□□ -0.69
ATXN1-209ENST00000495178 ZSWIM6Q9HCJ5 1215 aa10.75□□□□□ -0.69
ATXN1-209ENST00000495178 VARS2Q5ST30 1063 aaKnown RBP10.74□□□□□ -0.69
ATXN1-209ENST00000495178 RNF166Q96A37 237 aaPredicted RBP10.74□□□□□ -0.69
ATXN1-209ENST00000495178 MICALL2Q8IY33 904 aa10.72□□□□□ -0.69
ATXN1-209ENST00000495178 TMEM92Q6UXU6 159 aa10.7□□□□□ -0.7
ATXN1-209ENST00000495178 ZNF687Q8N1G0 1237 aa10.69□□□□□ -0.7
ATXN1-209ENST00000495178 MYT1LQ9UL68 1186 aa10.69□□□□□ -0.7
ATXN1-209ENST00000495178 SOX12O15370 315 aa10.68□□□□□ -0.7
ATXN1-209ENST00000495178 GPR153Q6NV75 609 aa10.68□□□□□ -0.7
ATXN1-209ENST00000495178 PTGER2P43116 358 aa10.63□□□□□ -0.71
ATXN1-209ENST00000495178 MS4A4AQ96JQ5 239 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms