RNA–Protein interactions for RNA: ENST00000494707.5

RPGR-209, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 5

Gene RPGR, Length 426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-209ENST00000494707 ASTLQ6HA08 431 aaPredicted RBP8.82□□□□□ -1
RPGR-209ENST00000494707 METRNQ9UJH8 293 aa8.82□□□□□ -1
RPGR-209ENST00000494707 POTEGQ6S5H5 508 aa8.8□□□□□ -1
RPGR-209ENST00000494707 PELP1Q8IZL8 1130 aaKnown RBP8.79□□□□□ -1
RPGR-209ENST00000494707 MS4A3Q96HJ5 214 aa8.79□□□□□ -1
RPGR-209ENST00000494707 ATMINO43313 823 aaPredicted RBP8.78□□□□□ -1
RPGR-209ENST00000494707 PLEKHG5O94827 1062 aa8.76□□□□□ -1.01
RPGR-209ENST00000494707 SCUBE2Q9NQ36 999 aa8.76□□□□□ -1.01
RPGR-209ENST00000494707 TSPYL2Q9H2G4 693 aaPredicted RBP8.73□□□□□ -1.01
RPGR-209ENST00000494707 CCDC61Q9Y6R9 512 aa8.69□□□□□ -1.02
RPGR-209ENST00000494707 ATN1P54259 1190 aaPredicted RBP8.67□□□□□ -1.02
RPGR-209ENST00000494707 KIF12Q96FN5 646 aa8.67□□□□□ -1.02
RPGR-209ENST00000494707 TIE1P35590 1138 aa8.65□□□□□ -1.02
RPGR-209ENST00000494707 PROM2Q8N271 834 aa8.65□□□□□ -1.02
RPGR-209ENST00000494707 FAM163AQ96GL9 167 aaPredicted RBP8.65□□□□□ -1.02
RPGR-209ENST00000494707 POTEJP0CG39 1038 aa8.64□□□□□ -1.03
RPGR-209ENST00000494707 SEC24BO95487 1268 aa8.62□□□□□ -1.03
RPGR-209ENST00000494707 MIER1Q8N108 512 aa8.62□□□□□ -1.03
RPGR-209ENST00000494707 BMP2KQ9NSY1 1161 aaPredicted RBP8.61□□□□□ -1.03
RPGR-209ENST00000494707 MAP3K13O43283 966 aa8.59□□□□□ -1.03
RPGR-209ENST00000494707 SGIP1Q9BQI5 828 aa8.58□□□□□ -1.04
RPGR-209ENST00000494707 ZBTB47Q9UFB7 747 aaPredicted RBP8.58□□□□□ -1.04
RPGR-209ENST00000494707 IER5LQ5T953 404 aa8.57□□□□□ -1.04
RPGR-209ENST00000494707 LCE2DQ5TA82 110 aaPredicted RBP8.55□□□□□ -1.04
RPGR-209ENST00000494707 POTEFA5A3E0 1075 aa8.53□□□□□ -1.04
RPGR-209ENST00000494707 TTLL13PA6NNM8 815 aa8.53□□□□□ -1.04
RPGR-209ENST00000494707 RASEFQ8IZ41 740 aa8.53□□□□□ -1.04
RPGR-209ENST00000494707 PLCD3Q8N3E9 789 aa8.53□□□□□ -1.04
RPGR-209ENST00000494707 TRPC6Q9Y210 931 aa8.52□□□□□ -1.05
RPGR-209ENST00000494707 PCDHB13Q9Y5F0 798 aa8.51□□□□□ -1.05
RPGR-209ENST00000494707 TRIM35Q9UPQ4 493 aa8.5□□□□□ -1.05
RPGR-209ENST00000494707 FKBP8Q14318 412 aa8.49□□□□□ -1.05
RPGR-209ENST00000494707 COLQQ9Y215 455 aaPredicted RBP8.49□□□□□ -1.05
RPGR-209ENST00000494707 CDAN1Q8IWY9 1227 aa8.47□□□□□ -1.05
RPGR-209ENST00000494707 FAM212AQ96EL1 285 aa8.46□□□□□ -1.06
RPGR-209ENST00000494707 PLCG2P16885 1265 aa8.45□□□□□ -1.06
RPGR-209ENST00000494707 SLAIN1Q8ND83 568 aa8.45□□□□□ -1.06
RPGR-209ENST00000494707 TMEM106CQ9BVX2 250 aa8.42□□□□□ -1.06
RPGR-209ENST00000494707 SNPHO15079 494 aa8.41□□□□□ -1.06
RPGR-209ENST00000494707 NUBP1P53384 320 aa8.4□□□□□ -1.06
RPGR-209ENST00000494707 IFNL1Q8IU54 200 aa8.4□□□□□ -1.06
RPGR-209ENST00000494707 ST18O60284 1047 aa8.39□□□□□ -1.07
RPGR-209ENST00000494707 TMEM121BQ9BXQ6 578 aaPredicted RBP8.38□□□□□ -1.07
RPGR-209ENST00000494707 OCEL1Q9H607 264 aa8.36□□□□□ -1.07
RPGR-209ENST00000494707 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.35□□□□□ -1.07
RPGR-209ENST00000494707 IRX5P78411 483 aaPredicted RBP8.34□□□□□ -1.07
RPGR-209ENST00000494707 DCAF8Q5TAQ9 597 aa8.31□□□□□ -1.08
RPGR-209ENST00000494707 GOLGA2Q08379 1002 aa8.27□□□□□ -1.09
RPGR-209ENST00000494707 MMRN1Q13201 1228 aa8.26□□□□□ -1.09
RPGR-209ENST00000494707 FBXO3Q9UK99 471 aa8.26□□□□□ -1.09
RPGR-209ENST00000494707 PYGBP11216 843 aa8.25□□□□□ -1.09
RPGR-209ENST00000494707 C3orf67Q6ZVT6 689 aa8.25□□□□□ -1.09
RPGR-209ENST00000494707 SPNS2Q8IVW8 549 aa8.25□□□□□ -1.09
RPGR-209ENST00000494707 L3MBTL3Q96JM7 780 aaPredicted RBP8.25□□□□□ -1.09
RPGR-209ENST00000494707 ZNF467Q7Z7K2 595 aaPredicted RBP8.24□□□□□ -1.09
RPGR-209ENST00000494707 MKRN3Q13064 507 aaKnown RBP8.23□□□□□ -1.09
RPGR-209ENST00000494707 GSE1Q14687 1217 aa8.22□□□□□ -1.09
RPGR-209ENST00000494707 PCDHB8Q9UN66 801 aa8.21□□□□□ -1.1
RPGR-209ENST00000494707 MARVELD3Q96A59 401 aa8.2□□□□□ -1.1
RPGR-209ENST00000494707 EMP3P54852 163 aa8.19□□□□□ -1.1
RPGR-209ENST00000494707 VASPP50552 380 aaPredicted RBP8.16□□□□□ -1.1
RPGR-209ENST00000494707 KLHL34Q8N239 644 aa8.16□□□□□ -1.1
RPGR-209ENST00000494707 PDCD7Q8N8D1 485 aaKnown RBP8.15□□□□□ -1.1
RPGR-209ENST00000494707 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.15□□□□□ -1.12e-6■■■■□ 24.3
RPGR-209ENST00000494707 G3V3G9 751 aa8.14□□□□□ -1.11
RPGR-209ENST00000494707 CHRM1P11229 460 aaPredicted RBP8.13□□□□□ -1.11
RPGR-209ENST00000494707 HS3ST6Q96QI5 342 aa8.11□□□□□ -1.11
RPGR-209ENST00000494707 FAM205CA6NFA0 338 aa8.1□□□□□ -1.11
RPGR-209ENST00000494707 PSEN1P49768 467 aa8.1□□□□□ -1.11
RPGR-209ENST00000494707 PDAP1Q13442 181 aaKnown RBP8.07□□□□□ -1.12
RPGR-209ENST00000494707 ZNF710Q8N1W2 664 aa8.05□□□□□ -1.12
RPGR-209ENST00000494707 KRTAP3-3Q9BYR6 98 aa8.05□□□□□ -1.12
RPGR-209ENST00000494707 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
RPGR-209ENST00000494707 DOK7Q18PE1 504 aa8.03□□□□□ -1.12
RPGR-209ENST00000494707 ILDR1Q86SU0 546 aaPredicted RBP8.03□□□□□ -1.12
RPGR-209ENST00000494707 BOLA1Q9Y3E2 137 aa8.03□□□□□ -1.12
RPGR-209ENST00000494707 RIMBP2O15034 1052 aa8.02□□□□□ -1.13
RPGR-209ENST00000494707 IFNLR1Q8IU57 520 aaPredicted RBP8.01□□□□□ -1.13
RPGR-209ENST00000494707 CABP2Q9NPB3 220 aa8□□□□□ -1.13
RPGR-209ENST00000494707 ERBB3P21860 1342 aa8□□□□□ -1.13
RPGR-209ENST00000494707 POTEB3A0JP26 581 aa7.99□□□□□ -1.13
RPGR-209ENST00000494707 HOXB1P14653 301 aaPredicted RBP7.99□□□□□ -1.13
RPGR-209ENST00000494707 POTEBQ6S5H4 581 aa7.99□□□□□ -1.13
RPGR-209ENST00000494707 HOXB3P14651 431 aaPredicted RBP7.97□□□□□ -1.13
RPGR-209ENST00000494707 SPOCK2Q92563 424 aa7.97□□□□□ -1.13
RPGR-209ENST00000494707 DPY19L2Q6NUT2 758 aa7.96□□□□□ -1.14
RPGR-209ENST00000494707 CIZ1Q9ULV3 898 aaPredicted RBP7.96□□□□□ -1.14
RPGR-209ENST00000494707 RNF166Q96A37 237 aaPredicted RBP7.94□□□□□ -1.14
RPGR-209ENST00000494707 ZSWIM6Q9HCJ5 1215 aa7.93□□□□□ -1.14
RPGR-209ENST00000494707 PTGER2P43116 358 aa7.92□□□□□ -1.14
RPGR-209ENST00000494707 TRIM41Q8WV44 630 aa7.92□□□□□ -1.14
RPGR-209ENST00000494707 MYT1LQ9UL68 1186 aa7.91□□□□□ -1.14
RPGR-209ENST00000494707 VARS2Q5ST30 1063 aaKnown RBP7.89□□□□□ -1.15
RPGR-209ENST00000494707 ZNF687Q8N1G0 1237 aa7.87□□□□□ -1.15
RPGR-209ENST00000494707 SOX12O15370 315 aa7.84□□□□□ -1.15
RPGR-209ENST00000494707 EFCAB3Q8N7B9 438 aa7.84□□□□□ -1.15
RPGR-209ENST00000494707 MICALL2Q8IY33 904 aa7.83□□□□□ -1.16
RPGR-209ENST00000494707 GPR153Q6NV75 609 aa7.8□□□□□ -1.16
RPGR-209ENST00000494707 ANKRD13DQ6ZTN6 518 aa7.76□□□□□ -1.17
RPGR-209ENST00000494707 RIOK3O14730 519 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms