RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 MNX1P50219 401 aaPredicted RBP6.3□□□□□ -1.4
LMNB1-207ENST00000494185 NUBP1P53384 320 aa6.28□□□□□ -1.4
LMNB1-207ENST00000494185 TSPYL2Q9H2G4 693 aaPredicted RBP6.27□□□□□ -1.41
LMNB1-207ENST00000494185 ECM2O94769 699 aaPredicted RBP6.26□□□□□ -1.41
LMNB1-207ENST00000494185 ZRANB1Q9UGI0 708 aa6.26□□□□□ -1.41
LMNB1-207ENST00000494185 ZNF467Q7Z7K2 595 aaPredicted RBP6.24□□□□□ -1.41
LMNB1-207ENST00000494185 RASEFQ8IZ41 740 aa6.24□□□□□ -1.41
LMNB1-207ENST00000494185 SGIP1Q9BQI5 828 aa6.24□□□□□ -1.41
LMNB1-207ENST00000494185 C19orf67A6NJJ6 358 aa6.23□□□□□ -1.41
LMNB1-207ENST00000494185 DCAF8L2P0C7V8 631 aa6.23□□□□□ -1.41
LMNB1-207ENST00000494185 PKD2Q13563 968 aa6.22□□□□□ -1.41
LMNB1-207ENST00000494185 CHRM1P11229 460 aaPredicted RBP6.21□□□□□ -1.42
LMNB1-207ENST00000494185 ZNF579Q8NAF0 562 aaKnown RBP6.21□□□□□ -1.42
LMNB1-207ENST00000494185 PLSCR2Q9NRY7 297 aa6.2□□□□□ -1.42
LMNB1-207ENST00000494185 CCDC61Q9Y6R9 512 aa6.19□□□□□ -1.42
LMNB1-207ENST00000494185 PYGBP11216 843 aa6.18□□□□□ -1.42
LMNB1-207ENST00000494185 PCDHB13Q9Y5F0 798 aa6.18□□□□□ -1.42
LMNB1-207ENST00000494185 RIOK3O14730 519 aaKnown RBP6.17□□□□□ -1.42
LMNB1-207ENST00000494185 VGFO15240 615 aaPredicted RBP6.17□□□□□ -1.42
LMNB1-207ENST00000494185 GOLGA2Q08379 1002 aa6.16□□□□□ -1.42
LMNB1-207ENST00000494185 PDAP1Q13442 181 aaKnown RBP6.14□□□□□ -1.43
LMNB1-207ENST00000494185 RYDENQ9NUL5 291 aaKnown RBP6.14□□□□□ -1.43
LMNB1-207ENST00000494185 KIF12Q96FN5 646 aa6.13□□□□□ -1.43
LMNB1-207ENST00000494185 RGL2O15211 777 aa6.11□□□□□ -1.43
LMNB1-207ENST00000494185 MAP3K13O43283 966 aa6.11□□□□□ -1.43
LMNB1-207ENST00000494185 PHF12Q96QT6 1004 aa6.11□□□□□ -1.43
LMNB1-207ENST00000494185 DCBLD2Q96PD2 775 aa6.1□□□□□ -1.43
LMNB1-207ENST00000494185 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.1□□□□□ -1.43
LMNB1-207ENST00000494185 STK25O00506 426 aa6.09□□□□□ -1.43
LMNB1-207ENST00000494185 TIE1P35590 1138 aa6.09□□□□□ -1.43
LMNB1-207ENST00000494185 PSEN1P49768 467 aa6.07□□□□□ -1.44
LMNB1-207ENST00000494185 IFNL1Q8IU54 200 aa6.07□□□□□ -1.44
LMNB1-207ENST00000494185 MS4A3Q96HJ5 214 aa6.07□□□□□ -1.44
LMNB1-207ENST00000494185 CHGAP10645 457 aaKnown RBP6.06□□□□□ -1.44
LMNB1-207ENST00000494185 RNF25Q96BH1 459 aaPredicted RBP6.06□□□□□ -1.44
LMNB1-207ENST00000494185 MKRN3Q13064 507 aaKnown RBP6.05□□□□□ -1.44
LMNB1-207ENST00000494185 HS6ST3Q8IZP7 471 aa6.05□□□□□ -1.44
LMNB1-207ENST00000494185 TMEM106CQ9BVX2 250 aa6.05□□□□□ -1.44
LMNB1-207ENST00000494185 PCDHB8Q9UN66 801 aa6.05□□□□□ -1.44
LMNB1-207ENST00000494185 STK24Q9Y6E0 443 aa6.05□□□□□ -1.44
LMNB1-207ENST00000494185 GABBR2O75899 941 aa6.04□□□□□ -1.44
LMNB1-207ENST00000494185 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.03□□□□□ -1.44
LMNB1-207ENST00000494185 ZFP91Q96JP5 570 aaPredicted RBP6.03□□□□□ -1.44
LMNB1-207ENST00000494185 BCL11BQ9C0K0 894 aaPredicted RBP6.03□□□□□ -1.44
LMNB1-207ENST00000494185 G3V3G9 751 aa6.02□□□□□ -1.45
LMNB1-207ENST00000494185 GALR2O43603 387 aaPredicted RBP6.02□□□□□ -1.45
LMNB1-207ENST00000494185 LHX8Q68G74 356 aa6.02□□□□□ -1.45
LMNB1-207ENST00000494185 BBXQ8WY36 941 aaPredicted RBP6.02□□□□□ -1.45
LMNB1-207ENST00000494185 IER5LQ5T953 404 aa6.01□□□□□ -1.45
LMNB1-207ENST00000494185 SOX12O15370 315 aa6□□□□□ -1.45
LMNB1-207ENST00000494185 CABP2Q9NPB3 220 aa6□□□□□ -1.45
LMNB1-207ENST00000494185 TTLL13PA6NNM8 815 aa5.99□□□□□ -1.45
LMNB1-207ENST00000494185 SEC24BO95487 1268 aa5.99□□□□□ -1.45
LMNB1-207ENST00000494185 EVX2Q03828 476 aa5.99□□□□□ -1.45
LMNB1-207ENST00000494185 SLC39A7Q92504 469 aa5.99□□□□□ -1.45
LMNB1-207ENST00000494185 NLRP6P59044 892 aa5.98□□□□□ -1.45
LMNB1-207ENST00000494185 ASTLQ6HA08 431 aaPredicted RBP5.98□□□□□ -1.45
LMNB1-207ENST00000494185 DNAJC5Q9H3Z4 198 aa5.98□□□□□ -1.45
LMNB1-207ENST00000494185 TRIM35Q9UPQ4 493 aa5.98□□□□□ -1.45
LMNB1-207ENST00000494185 C7P10643 843 aa5.97□□□□□ -1.45
LMNB1-207ENST00000494185 PLCG2P16885 1265 aa5.97□□□□□ -1.45
LMNB1-207ENST00000494185 BMP2KQ9NSY1 1161 aaPredicted RBP5.97□□□□□ -1.45
LMNB1-207ENST00000494185 ATMINO43313 823 aaPredicted RBP5.95□□□□□ -1.46
LMNB1-207ENST00000494185 SLC24A1O60721 1099 aa5.95□□□□□ -1.46
LMNB1-207ENST00000494185 PLCB2Q00722 1185 aa5.95□□□□□ -1.46
LMNB1-207ENST00000494185 SPRYD3Q8NCJ5 442 aa5.95□□□□□ -1.46
LMNB1-207ENST00000494185 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.94□□□□□ -1.461e-7■□□□□ 9.8
LMNB1-207ENST00000494185 EFCAB3Q8N7B9 438 aa5.92□□□□□ -1.46
LMNB1-207ENST00000494185 L3MBTL3Q96JM7 780 aaPredicted RBP5.92□□□□□ -1.46
LMNB1-207ENST00000494185 OCEL1Q9H607 264 aa5.92□□□□□ -1.46
LMNB1-207ENST00000494185 ATN1P54259 1190 aaPredicted RBP5.91□□□□□ -1.46
LMNB1-207ENST00000494185 PAXIP1Q6ZW49 1069 aaPredicted RBP5.91□□□□□ -1.46
LMNB1-207ENST00000494185 CFAP44Q96MT7 982 aa5.91□□□□□ -1.46
LMNB1-207ENST00000494185 METRNQ9UJH8 293 aa5.9□□□□□ -1.46
LMNB1-207ENST00000494185 MAMSTRQ6ZN01 415 aa5.89□□□□□ -1.47
LMNB1-207ENST00000494185 TRPC6Q9Y210 931 aa5.89□□□□□ -1.47
LMNB1-207ENST00000494185 HAP1P54257 671 aaPredicted RBP5.88□□□□□ -1.47
LMNB1-207ENST00000494185 NKX1-1Q15270 411 aaPredicted RBP5.88□□□□□ -1.47
LMNB1-207ENST00000494185 C3orf67Q6ZVT6 689 aa5.88□□□□□ -1.47
LMNB1-207ENST00000494185 SCUBE2Q9NQ36 999 aa5.86□□□□□ -1.47
LMNB1-207ENST00000494185 IRX5P78411 483 aaPredicted RBP5.85□□□□□ -1.47
LMNB1-207ENST00000494185 MFRPQ9BY79 579 aa5.85□□□□□ -1.47
LMNB1-207ENST00000494185 PHF8Q9UPP1 1060 aa5.85□□□□□ -1.47
LMNB1-207ENST00000494185 GTPBP6O43824 516 aaPredicted RBP5.84□□□□□ -1.47
LMNB1-207ENST00000494185 BOLA1Q9Y3E2 137 aa5.83□□□□□ -1.48
LMNB1-207ENST00000494185 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.82□□□□□ -1.48
LMNB1-207ENST00000494185 ILDR1Q86SU0 546 aaPredicted RBP5.81□□□□□ -1.48
LMNB1-207ENST00000494185 FBXO22Q8NEZ5 403 aa5.81□□□□□ -1.48
LMNB1-207ENST00000494185 TMC2Q8TDI7 906 aa5.81□□□□□ -1.48
LMNB1-207ENST00000494185 WDR70Q9NW82 654 aa5.81□□□□□ -1.48
LMNB1-207ENST00000494185 PDCD7Q8N8D1 485 aaKnown RBP5.8□□□□□ -1.48
LMNB1-207ENST00000494185 POTEIP0CG38 1075 aa5.79□□□□□ -1.48
LMNB1-207ENST00000494185 MICALL2Q8IY33 904 aa5.78□□□□□ -1.48
LMNB1-207ENST00000494185 PELP1Q8IZL8 1130 aaKnown RBP5.78□□□□□ -1.48
LMNB1-207ENST00000494185 VSIG10Q8N0Z9 540 aa5.78□□□□□ -1.48
LMNB1-207ENST00000494185 TSHZ2Q9NRE2 1034 aa5.78□□□□□ -1.48
LMNB1-207ENST00000494185 ZNF316A6NFI3 1004 aaPredicted RBP5.77□□□□□ -1.49
LMNB1-207ENST00000494185 PDE4AP27815 886 aa5.77□□□□□ -1.49
LMNB1-207ENST00000494185 P3H3Q8IVL6 736 aa5.77□□□□□ -1.49
LMNB1-207ENST00000494185 RIMBP2O15034 1052 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms