RNA–Protein interactions for RNA: ENST00000490221.5

CCT3-214, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-214ENST00000490221 RNF25Q96BH1 459 aaPredicted RBP9.7□□□□□ -0.86
CCT3-214ENST00000490221 FAM212AQ96EL1 285 aa9.68□□□□□ -0.86
CCT3-214ENST00000490221 TSPYL2Q9H2G4 693 aaPredicted RBP9.67□□□□□ -0.86
CCT3-214ENST00000490221 PYGBP11216 843 aa9.64□□□□□ -0.87
CCT3-214ENST00000490221 TRIM41Q8WV44 630 aa9.61□□□□□ -0.87
CCT3-214ENST00000490221 CHRM1P11229 460 aaPredicted RBP9.59□□□□□ -0.87
CCT3-214ENST00000490221 SP7Q8TDD2 431 aaPredicted RBP9.58□□□□□ -0.88
CCT3-214ENST00000490221 CCDC61Q9Y6R9 512 aa9.58□□□□□ -0.88
CCT3-214ENST00000490221 RIOK3O14730 519 aaKnown RBP9.55□□□□□ -0.88
CCT3-214ENST00000490221 CHGAP10645 457 aaKnown RBP9.54□□□□□ -0.88
CCT3-214ENST00000490221 HAX1O00165 279 aa9.53□□□□□ -0.88
CCT3-214ENST00000490221 SLC24A1O60721 1099 aa9.53□□□□□ -0.88
CCT3-214ENST00000490221 CD44P16070 742 aaKnown RBP9.52□□□□□ -0.89
CCT3-214ENST00000490221 PHF12Q96QT6 1004 aa9.51□□□□□ -0.89
CCT3-214ENST00000490221 ZRANB1Q9UGI0 708 aa9.51□□□□□ -0.89
CCT3-214ENST00000490221 PCDHB8Q9UN66 801 aa9.51□□□□□ -0.89
CCT3-214ENST00000490221 PCDHB13Q9Y5F0 798 aa9.51□□□□□ -0.89
CCT3-214ENST00000490221 C19orf67A6NJJ6 358 aa9.5□□□□□ -0.89
CCT3-214ENST00000490221 PLCB2Q00722 1185 aa9.49□□□□□ -0.89
CCT3-214ENST00000490221 KIF12Q96FN5 646 aa9.49□□□□□ -0.89
CCT3-214ENST00000490221 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.48□□□□□ -0.89
CCT3-214ENST00000490221 MAP3K13O43283 966 aa9.48□□□□□ -0.89
CCT3-214ENST00000490221 EVX2Q03828 476 aa9.48□□□□□ -0.89
CCT3-214ENST00000490221 HS6ST3Q8IZP7 471 aa9.48□□□□□ -0.89
CCT3-214ENST00000490221 BBXQ8WY36 941 aaPredicted RBP9.48□□□□□ -0.89
CCT3-214ENST00000490221 ZFP91Q96JP5 570 aaPredicted RBP9.48□□□□□ -0.89
CCT3-214ENST00000490221 VGFO15240 615 aaPredicted RBP9.46□□□□□ -0.9
CCT3-214ENST00000490221 PAK3O75914 559 aaPredicted RBP9.46□□□□□ -0.9
CCT3-214ENST00000490221 NKX1-1Q15270 411 aaPredicted RBP9.45□□□□□ -0.9
CCT3-214ENST00000490221 IFNL1Q8IU54 200 aa9.45□□□□□ -0.9
CCT3-214ENST00000490221 ABCC9O60706 1549 aa9.45□□□□□ -0.9
CCT3-214ENST00000490221 STK25O00506 426 aa9.43□□□□□ -0.9
CCT3-214ENST00000490221 PAXIP1Q6ZW49 1069 aaPredicted RBP9.42□□□□□ -0.9
CCT3-214ENST00000490221 SGIP1Q9BQI5 828 aa9.42□□□□□ -0.9
CCT3-214ENST00000490221 BCL11BQ9C0K0 894 aaPredicted RBP9.42□□□□□ -0.9
CCT3-214ENST00000490221 ZNF467Q7Z7K2 595 aaPredicted RBP9.41□□□□□ -0.9
CCT3-214ENST00000490221 ZNF579Q8NAF0 562 aaKnown RBP9.41□□□□□ -0.9
CCT3-214ENST00000490221 TRPC6Q9Y210 931 aa9.41□□□□□ -0.9
CCT3-214ENST00000490221 STK24Q9Y6E0 443 aa9.4□□□□□ -0.9
CCT3-214ENST00000490221 CFAP44Q96MT7 982 aa9.39□□□□□ -0.91
CCT3-214ENST00000490221 PSEN1P49768 467 aa9.38□□□□□ -0.91
CCT3-214ENST00000490221 DNAJC5Q9H3Z4 198 aa9.38□□□□□ -0.91
CCT3-214ENST00000490221 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.38□□□□□ -0.91
CCT3-214ENST00000490221 PDAP1Q13442 181 aaKnown RBP9.37□□□□□ -0.91
CCT3-214ENST00000490221 MS4A3Q96HJ5 214 aa9.37□□□□□ -0.91
CCT3-214ENST00000490221 HAP1P54257 671 aaPredicted RBP9.35□□□□□ -0.91
CCT3-214ENST00000490221 TAOK2Q9UL54 1235 aa9.35□□□□□ -0.91
CCT3-214ENST00000490221 GTPBP6O43824 516 aaPredicted RBP9.33□□□□□ -0.92
CCT3-214ENST00000490221 SPRYD3Q8NCJ5 442 aa9.33□□□□□ -0.92
CCT3-214ENST00000490221 GALR2O43603 387 aaPredicted RBP9.31□□□□□ -0.92
CCT3-214ENST00000490221 TSHZ2Q9NRE2 1034 aa9.31□□□□□ -0.92
CCT3-214ENST00000490221 CCDC180Q9P1Z9 1646 aa9.31□□□□□ -0.92
CCT3-214ENST00000490221 CABP2Q9NPB3 220 aa9.27□□□□□ -0.93
CCT3-214ENST00000490221 EFCAB3Q8N7B9 438 aa9.26□□□□□ -0.93
CCT3-214ENST00000490221 TMEM106CQ9BVX2 250 aa9.26□□□□□ -0.93
CCT3-214ENST00000490221 KDM2AQ9Y2K7 1162 aa9.26□□□□□ -0.93
CCT3-214ENST00000490221 MFRPQ9BY79 579 aa9.25□□□□□ -0.93
CCT3-214ENST00000490221 BMP2KQ9NSY1 1161 aaPredicted RBP9.23□□□□□ -0.93
CCT3-214ENST00000490221 TTLL13PA6NNM8 815 aa9.22□□□□□ -0.93
CCT3-214ENST00000490221 PHF8Q9UPP1 1060 aa9.21□□□□□ -0.94
CCT3-214ENST00000490221 GABBR2O75899 941 aa9.2□□□□□ -0.94
CCT3-214ENST00000490221 FBXO22Q8NEZ5 403 aa9.2□□□□□ -0.94
CCT3-214ENST00000490221 PPP1R37O75864 691 aa9.19□□□□□ -0.94
CCT3-214ENST00000490221 TIE1P35590 1138 aa9.19□□□□□ -0.94
CCT3-214ENST00000490221 MS4A4AQ96JQ5 239 aa9.17□□□□□ -0.94
CCT3-214ENST00000490221 VSIG10Q8N0Z9 540 aa9.16□□□□□ -0.94
CCT3-214ENST00000490221 ATN1P54259 1190 aaPredicted RBP9.15□□□□□ -0.94
CCT3-214ENST00000490221 CADPS2Q86UW7 1296 aa9.15□□□□□ -0.94
CCT3-214ENST00000490221 SOX12O15370 315 aa9.14□□□□□ -0.95
CCT3-214ENST00000490221 ATMINO43313 823 aaPredicted RBP9.14□□□□□ -0.95
CCT3-214ENST00000490221 TRIM35Q9UPQ4 493 aa9.14□□□□□ -0.95
CCT3-214ENST00000490221 CLCN6P51797 869 aa9.13□□□□□ -0.95
CCT3-214ENST00000490221 NLRP6P59044 892 aa9.12□□□□□ -0.95
CCT3-214ENST00000490221 PELP1Q8IZL8 1130 aaKnown RBP9.12□□□□□ -0.95
CCT3-214ENST00000490221 ASTLQ6HA08 431 aaPredicted RBP9.11□□□□□ -0.95
CCT3-214ENST00000490221 POTEIP0CG38 1075 aa9.09□□□□□ -0.95
CCT3-214ENST00000490221 GOLGA2Q08379 1002 aa9.09□□□□□ -0.95
CCT3-214ENST00000490221 MKRN3Q13064 507 aaKnown RBP9.09□□□□□ -0.95
CCT3-214ENST00000490221 ILDR1Q86SU0 546 aaPredicted RBP9.09□□□□□ -0.95
CCT3-214ENST00000490221 RYDENQ9NUL5 291 aaKnown RBP9.09□□□□□ -0.95
CCT3-214ENST00000490221 DPY19L2Q6NUT2 758 aa9.08□□□□□ -0.96
CCT3-214ENST00000490221 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.06□□□□□ -0.961e-10■■□□□ 12.7
CCT3-214ENST00000490221 IRX5P78411 483 aaPredicted RBP9.04□□□□□ -0.96
CCT3-214ENST00000490221 PDCD7Q8N8D1 485 aaKnown RBP9.04□□□□□ -0.96
CCT3-214ENST00000490221 DCBLD2Q96PD2 775 aa9.01□□□□□ -0.97
CCT3-214ENST00000490221 COLQQ9Y215 455 aaPredicted RBP9.01□□□□□ -0.97
CCT3-214ENST00000490221 POTEFA5A3E0 1075 aa9□□□□□ -0.97
CCT3-214ENST00000490221 LHX8Q68G74 356 aa8.98□□□□□ -0.97
CCT3-214ENST00000490221 NCKAP5LQ9HCH0 1330 aa8.98□□□□□ -0.97
CCT3-214ENST00000490221 IER5LQ5T953 404 aa8.97□□□□□ -0.97
CCT3-214ENST00000490221 OCEL1Q9H607 264 aa8.97□□□□□ -0.97
CCT3-214ENST00000490221 RB1CC1Q8TDY2 1594 aa8.95□□□□□ -0.98
CCT3-214ENST00000490221 MICALL2Q8IY33 904 aa8.93□□□□□ -0.98
CCT3-214ENST00000490221 PLCG2P16885 1265 aa8.92□□□□□ -0.98
CCT3-214ENST00000490221 METRNQ9UJH8 293 aa8.92□□□□□ -0.98
CCT3-214ENST00000490221 SLC39A7Q92504 469 aa8.91□□□□□ -0.98
CCT3-214ENST00000490221 CRISPLD2Q9H0B8 497 aa8.91□□□□□ -0.98
CCT3-214ENST00000490221 LARP6Q9BRS8 491 aaKnown RBP8.9□□□□□ -0.98
CCT3-214ENST00000490221 TMEM121BQ9BXQ6 578 aaPredicted RBP8.9□□□□□ -0.98
CCT3-214ENST00000490221 SEC24BO95487 1268 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms