RNA–Protein interactions for RNA: ENST00000490210.6

ATP9B-204, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 1 (best)

Gene ATP9B, Length 7,353 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-204ENST00000490210 TSHZ2Q9NRE2 1034 aa13.67□□□□□ -0.22
ATP9B-204ENST00000490210 L1TD1Q5T7N2 865 aaKnown RBP13.65□□□□□ -0.22
ATP9B-204ENST00000490210 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
ATP9B-204ENST00000490210 MYO15BQ96JP2 1530 aa13.62□□□□□ -0.23
ATP9B-204ENST00000490210 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
ATP9B-204ENST00000490210 DNTTIP2Q5QJE6 756 aaKnown RBP13.6□□□□□ -0.23
ATP9B-204ENST00000490210 PTMAP06454 111 aaKnown RBP13.6□□□□□ -0.23
ATP9B-204ENST00000490210 CHMP7Q8WUX9 453 aaPredicted RBP13.6□□□□□ -0.23
ATP9B-204ENST00000490210 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
ATP9B-204ENST00000490210 NACADO15069 1562 aa13.59□□□□□ -0.23
ATP9B-204ENST00000490210 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
ATP9B-204ENST00000490210 ARID3CA6NKF2 412 aa13.57□□□□□ -0.24
ATP9B-204ENST00000490210 EIF4G2P78344 907 aaKnown RBP eCLIP13.56□□□□□ -0.242e-6■■■■■ 28.8
ATP9B-204ENST00000490210 PNNQ9H307 717 aaKnown RBP13.56□□□□□ -0.24
ATP9B-204ENST00000490210 WDR43Q15061 677 aaKnown RBP eCLIP13.55□□□□□ -0.24
ATP9B-204ENST00000490210 PLPPR3Q6T4P5 718 aa13.55□□□□□ -0.24
ATP9B-204ENST00000490210 RSPH6AQ9H0K4 717 aa13.53□□□□□ -0.24
ATP9B-204ENST00000490210 B4GALNT3Q6L9W6 998 aa13.52□□□□□ -0.25
ATP9B-204ENST00000490210 CCER2I3L3R5 266 aa13.51□□□□□ -0.25
ATP9B-204ENST00000490210 MSNP26038 577 aaKnown RBP13.5□□□□□ -0.25
ATP9B-204ENST00000490210 P3H3Q8IVL6 736 aa13.5□□□□□ -0.25
ATP9B-204ENST00000490210 USP35Q9P2H5 1018 aa13.48□□□□□ -0.25
ATP9B-204ENST00000490210 HIRIP3Q9BW71 556 aaPredicted RBP13.48□□□□□ -0.25
ATP9B-204ENST00000490210 ZNF777Q9ULD5 760 aaPredicted RBP13.46□□□□□ -0.25
ATP9B-204ENST00000490210 MYH16Q9H6N6 1097 aa13.46□□□□□ -0.26
ATP9B-204ENST00000490210 SLC24A1O60721 1099 aa13.45□□□□□ -0.26
ATP9B-204ENST00000490210 IPO9Q96P70 1041 aaKnown RBP13.45□□□□□ -0.26
ATP9B-204ENST00000490210 CHAF1AQ13111 956 aaPredicted RBP13.45□□□□□ -0.26
ATP9B-204ENST00000490210 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
ATP9B-204ENST00000490210 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
ATP9B-204ENST00000490210 VSIG10Q8N0Z9 540 aa13.41□□□□□ -0.26
ATP9B-204ENST00000490210 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
ATP9B-204ENST00000490210 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
ATP9B-204ENST00000490210 FANCIQ9NVI1 1328 aa13.4□□□□□ -0.26
ATP9B-204ENST00000490210 TCERG1O14776 1098 aaKnown RBP13.39□□□□□ -0.27
ATP9B-204ENST00000490210 CLIP1P30622 1438 aa13.39□□□□□ -0.27
ATP9B-204ENST00000490210 RGS3P49796 1198 aa13.38□□□□□ -0.27
ATP9B-204ENST00000490210 PTMSP20962 102 aa13.37□□□□□ -0.27
ATP9B-204ENST00000490210 CEP162Q5TB80 1403 aa13.37□□□□□ -0.27
ATP9B-204ENST00000490210 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
ATP9B-204ENST00000490210 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
ATP9B-204ENST00000490210 HSP90AB1P08238 724 aaKnown RBP13.34□□□□□ -0.27
ATP9B-204ENST00000490210 EEA1Q15075 1411 aa13.34□□□□□ -0.27
ATP9B-204ENST00000490210 HSCBQ8IWL3 235 aa13.34□□□□□ -0.27
ATP9B-204ENST00000490210 PRKCSHP14314 528 aaPredicted RBP13.33□□□□□ -0.28
ATP9B-204ENST00000490210 ZRSR1Q15695 479 aaKnown RBP13.33□□□□□ -0.28
ATP9B-204ENST00000490210 GOLGA6L3A6NEY3 463 aa13.33□□□□□ -0.28
ATP9B-204ENST00000490210 NRDCO43847 1150 aa13.33□□□□□ -0.28
ATP9B-204ENST00000490210 CASC1Q6TDU7 716 aa13.33□□□□□ -0.28
ATP9B-204ENST00000490210 GOLGA6L6A8MZA4 724 aa13.32□□□□□ -0.28
ATP9B-204ENST00000490210 AMER1Q5JTC6 1135 aaPredicted RBP13.3□□□□□ -0.28
ATP9B-204ENST00000490210 GSE1Q14687 1217 aa13.3□□□□□ -0.28
ATP9B-204ENST00000490210 TNNT3P45378 269 aaPredicted RBP13.29□□□□□ -0.28
ATP9B-204ENST00000490210 GBP4Q96PP9 640 aa13.29□□□□□ -0.28
ATP9B-204ENST00000490210 PLCB2Q00722 1185 aa13.29□□□□□ -0.28
ATP9B-204ENST00000490210 KIAA2012Q0VF49 1180 aa13.29□□□□□ -0.28
ATP9B-204ENST00000490210 GOLGA3Q08378 1498 aa13.27□□□□□ -0.29
ATP9B-204ENST00000490210 TNIKQ9UKE5 1360 aa13.27□□□□□ -0.29
ATP9B-204ENST00000490210 MS4A1P11836 297 aa13.26□□□□□ -0.29
ATP9B-204ENST00000490210 FTSJ3Q8IY81 847 aaKnown RBP13.26□□□□□ -0.29
ATP9B-204ENST00000490210 CHIC2Q9UKJ5 165 aa13.26□□□□□ -0.29
ATP9B-204ENST00000490210 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
ATP9B-204ENST00000490210 CHMP4BQ9H444 224 aaKnown RBP13.24□□□□□ -0.29
ATP9B-204ENST00000490210 PKNOX2Q96KN3 472 aa13.24□□□□□ -0.29
ATP9B-204ENST00000490210 KCNH8Q96L42 1107 aa13.23□□□□□ -0.29
ATP9B-204ENST00000490210 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
ATP9B-204ENST00000490210 MTUS2Q5JR59 1369 aa13.22□□□□□ -0.29
ATP9B-204ENST00000490210 KDM2AQ9Y2K7 1162 aa13.22□□□□□ -0.29
ATP9B-204ENST00000490210 GZF1Q9H116 711 aaPredicted RBP13.22□□□□□ -0.29
ATP9B-204ENST00000490210 CFAP44Q96MT7 982 aa13.21□□□□□ -0.29
ATP9B-204ENST00000490210 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
ATP9B-204ENST00000490210 SLKQ9H2G2 1235 aaPredicted RBP13.2□□□□□ -0.3
ATP9B-204ENST00000490210 CDCA8Q53HL2 280 aa13.19□□□□□ -0.3
ATP9B-204ENST00000490210 ARID3AQ99856 593 aa13.19□□□□□ -0.3
ATP9B-204ENST00000490210 KNSTRNQ9Y448 316 aa13.18□□□□□ -0.3
ATP9B-204ENST00000490210 SIN3AQ96ST3 1273 aa13.18□□□□□ -0.3
ATP9B-204ENST00000490210 SENP3-EIF4A1A0A087X0R7 540 aa13.18□□□□□ -0.3
ATP9B-204ENST00000490210 CFAP53Q96M91 514 aa13.17□□□□□ -0.3
ATP9B-204ENST00000490210 RCAN3Q9UKA8 241 aa13.16□□□□□ -0.3
ATP9B-204ENST00000490210 SYAP1Q96A49 352 aaPredicted RBP13.15□□□□□ -0.3
ATP9B-204ENST00000490210 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
ATP9B-204ENST00000490210 FRAT1Q92837 279 aaPredicted RBP13.15□□□□□ -0.3
ATP9B-204ENST00000490210 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
ATP9B-204ENST00000490210 SPRYD3Q8NCJ5 442 aa13.14□□□□□ -0.31
ATP9B-204ENST00000490210 NUDCQ9Y266 331 aa13.14□□□□□ -0.31
ATP9B-204ENST00000490210 GOLGA6L4A6NEF3 574 aa13.14□□□□□ -0.31
ATP9B-204ENST00000490210 DRC7Q8IY82 874 aa13.14□□□□□ -0.31
ATP9B-204ENST00000490210 AEBP2Q6ZN18 517 aaPredicted RBP13.13□□□□□ -0.31
ATP9B-204ENST00000490210 TPRNQ4KMQ1 711 aa13.13□□□□□ -0.31
ATP9B-204ENST00000490210 RSF1Q96T23 1441 aaPredicted RBP13.12□□□□□ -0.31
ATP9B-204ENST00000490210 DDX11L8A8MPP1 907 aa13.12□□□□□ -0.31
ATP9B-204ENST00000490210 CARD11Q9BXL7 1154 aa13.12□□□□□ -0.31
ATP9B-204ENST00000490210 RRP7BPQ9NSQ0 103 aa13.12□□□□□ -0.31
ATP9B-204ENST00000490210 TSPY4P0CV99 314 aa13.12□□□□□ -0.31
ATP9B-204ENST00000490210 TSPY10P0CW01 314 aa13.12□□□□□ -0.31
ATP9B-204ENST00000490210 MAP7D2Q96T17 732 aa13.1□□□□□ -0.31
ATP9B-204ENST00000490210 CCNB3Q8WWL7 1395 aa13.1□□□□□ -0.31
ATP9B-204ENST00000490210 PDE4AP27815 886 aa13.1□□□□□ -0.31
ATP9B-204ENST00000490210 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
ATP9B-204ENST00000490210 CEP164Q9UPV0 1460 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms