RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 TSPYL2Q9H2G4 693 aaPredicted RBP11.67□□□□□ -0.54
R3HDM1-217ENST00000486532 PHF12Q96QT6 1004 aa11.66□□□□□ -0.54
R3HDM1-217ENST00000486532 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
R3HDM1-217ENST00000486532 POTEMA6NI47 508 aa11.61□□□□□ -0.55
R3HDM1-217ENST00000486532 CCDC61Q9Y6R9 512 aa11.6□□□□□ -0.55
R3HDM1-217ENST00000486532 POTEGQ6S5H5 508 aa11.56□□□□□ -0.56
R3HDM1-217ENST00000486532 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
R3HDM1-217ENST00000486532 RASEFQ8IZ41 740 aa11.55□□□□□ -0.56
R3HDM1-217ENST00000486532 PELP1Q8IZL8 1130 aaKnown RBP11.55□□□□□ -0.56
R3HDM1-217ENST00000486532 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
R3HDM1-217ENST00000486532 ASTLQ6HA08 431 aaPredicted RBP11.53□□□□□ -0.56
R3HDM1-217ENST00000486532 KIF12Q96FN5 646 aa11.52□□□□□ -0.57
R3HDM1-217ENST00000486532 PCDH10Q9P2E7 1040 aa11.52□□□□□ -0.57
R3HDM1-217ENST00000486532 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
R3HDM1-217ENST00000486532 NUBP1P53384 320 aa11.51□□□□□ -0.57
R3HDM1-217ENST00000486532 SLC39A7Q92504 469 aa11.51□□□□□ -0.57
R3HDM1-217ENST00000486532 C7P10643 843 aa11.5□□□□□ -0.57
R3HDM1-217ENST00000486532 VASPP50552 380 aaPredicted RBP11.5□□□□□ -0.57
R3HDM1-217ENST00000486532 SGIP1Q9BQI5 828 aa11.5□□□□□ -0.57
R3HDM1-217ENST00000486532 MAMSTRQ6ZN01 415 aa11.48□□□□□ -0.57
R3HDM1-217ENST00000486532 KLHL34Q8N239 644 aa11.48□□□□□ -0.57
R3HDM1-217ENST00000486532 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
R3HDM1-217ENST00000486532 MAP3K13O43283 966 aa11.45□□□□□ -0.58
R3HDM1-217ENST00000486532 TIE1P35590 1138 aa11.43□□□□□ -0.58
R3HDM1-217ENST00000486532 DCAF8Q5TAQ9 597 aa11.43□□□□□ -0.58
R3HDM1-217ENST00000486532 POTEJP0CG39 1038 aa11.41□□□□□ -0.58
R3HDM1-217ENST00000486532 PCDHB13Q9Y5F0 798 aa11.41□□□□□ -0.58
R3HDM1-217ENST00000486532 GSE1Q14687 1217 aa11.4□□□□□ -0.58
R3HDM1-217ENST00000486532 SCUBE2Q9NQ36 999 aa11.38□□□□□ -0.59
R3HDM1-217ENST00000486532 ATN1P54259 1190 aaPredicted RBP11.34□□□□□ -0.59
R3HDM1-217ENST00000486532 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
R3HDM1-217ENST00000486532 LCE2DQ5TA82 110 aaPredicted RBP11.32□□□□□ -0.6
R3HDM1-217ENST00000486532 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
R3HDM1-217ENST00000486532 TTLL13PA6NNM8 815 aa11.29□□□□□ -0.6
R3HDM1-217ENST00000486532 IFNL1Q8IU54 200 aa11.29□□□□□ -0.6
R3HDM1-217ENST00000486532 FAM163AQ96GL9 167 aaPredicted RBP11.29□□□□□ -0.6
R3HDM1-217ENST00000486532 PYGBP11216 843 aa11.28□□□□□ -0.6
R3HDM1-217ENST00000486532 TRPC6Q9Y210 931 aa11.28□□□□□ -0.6
R3HDM1-217ENST00000486532 IER5LQ5T953 404 aa11.27□□□□□ -0.61
R3HDM1-217ENST00000486532 ZNF467Q7Z7K2 595 aaPredicted RBP11.25□□□□□ -0.61
R3HDM1-217ENST00000486532 SEC24BO95487 1268 aa11.24□□□□□ -0.61
R3HDM1-217ENST00000486532 CHRM1P11229 460 aaPredicted RBP11.24□□□□□ -0.61
R3HDM1-217ENST00000486532 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
R3HDM1-217ENST00000486532 TRIM35Q9UPQ4 493 aa11.24□□□□□ -0.61
R3HDM1-217ENST00000486532 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
R3HDM1-217ENST00000486532 POTEFA5A3E0 1075 aa11.22□□□□□ -0.61
R3HDM1-217ENST00000486532 CIZ1Q9ULV3 898 aaPredicted RBP11.19□□□□□ -0.62
R3HDM1-217ENST00000486532 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
R3HDM1-217ENST00000486532 PCDHB8Q9UN66 801 aa11.15□□□□□ -0.62
R3HDM1-217ENST00000486532 PLCG2P16885 1265 aa11.13□□□□□ -0.63
R3HDM1-217ENST00000486532 GOLGA2Q08379 1002 aa11.13□□□□□ -0.63
R3HDM1-217ENST00000486532 COLQQ9Y215 455 aaPredicted RBP11.12□□□□□ -0.63
R3HDM1-217ENST00000486532 CDAN1Q8IWY9 1227 aa11.09□□□□□ -0.63
R3HDM1-217ENST00000486532 OCEL1Q9H607 264 aa11.08□□□□□ -0.64
R3HDM1-217ENST00000486532 PSEN1P49768 467 aa11.07□□□□□ -0.64
R3HDM1-217ENST00000486532 MKRN3Q13064 507 aaKnown RBP11.07□□□□□ -0.64
R3HDM1-217ENST00000486532 PDAP1Q13442 181 aaKnown RBP11.07□□□□□ -0.64
R3HDM1-217ENST00000486532 IRX5P78411 483 aaPredicted RBP11.05□□□□□ -0.64
R3HDM1-217ENST00000486532 SLAIN1Q8ND83 568 aa11.01□□□□□ -0.65
R3HDM1-217ENST00000486532 ST18O60284 1047 aa10.98□□□□□ -0.65
R3HDM1-217ENST00000486532 L3MBTL3Q96JM7 780 aaPredicted RBP10.97□□□□□ -0.65
R3HDM1-217ENST00000486532 TAOK2Q9UL54 1235 aa10.96□□□□□ -0.65
R3HDM1-217ENST00000486532 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.94□□□□□ -0.669e-7■■■■■ 38.4
R3HDM1-217ENST00000486532 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.93□□□□□ -0.66
R3HDM1-217ENST00000486532 TMEM121BQ9BXQ6 578 aaPredicted RBP10.91□□□□□ -0.66
R3HDM1-217ENST00000486532 CABP2Q9NPB3 220 aa10.91□□□□□ -0.66
R3HDM1-217ENST00000486532 G3V3G9 751 aa10.9□□□□□ -0.66
R3HDM1-217ENST00000486532 RIOK3O14730 519 aaKnown RBP10.9□□□□□ -0.66
R3HDM1-217ENST00000486532 C3orf67Q6ZVT6 689 aa10.89□□□□□ -0.67
R3HDM1-217ENST00000486532 PDCD7Q8N8D1 485 aaKnown RBP10.89□□□□□ -0.67
R3HDM1-217ENST00000486532 SNPHO15079 494 aa10.88□□□□□ -0.67
R3HDM1-217ENST00000486532 VGFO15240 615 aaPredicted RBP10.88□□□□□ -0.67
R3HDM1-217ENST00000486532 MMRN1Q13201 1228 aa10.85□□□□□ -0.67
R3HDM1-217ENST00000486532 ILDR1Q86SU0 546 aaPredicted RBP10.85□□□□□ -0.67
R3HDM1-217ENST00000486532 SPNS2Q8IVW8 549 aa10.83□□□□□ -0.68
R3HDM1-217ENST00000486532 SOX12O15370 315 aa10.8□□□□□ -0.68
R3HDM1-217ENST00000486532 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.78□□□□□ -0.68
R3HDM1-217ENST00000486532 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
R3HDM1-217ENST00000486532 EFCAB3Q8N7B9 438 aa10.78□□□□□ -0.68
R3HDM1-217ENST00000486532 ZFP91Q96JP5 570 aaPredicted RBP10.78□□□□□ -0.68
R3HDM1-217ENST00000486532 RNF25Q96BH1 459 aaPredicted RBP10.77□□□□□ -0.69
R3HDM1-217ENST00000486532 BOLA1Q9Y3E2 137 aa10.77□□□□□ -0.69
R3HDM1-217ENST00000486532 MARVELD3Q96A59 401 aa10.74□□□□□ -0.69
R3HDM1-217ENST00000486532 DPY19L2Q6NUT2 758 aa10.71□□□□□ -0.69
R3HDM1-217ENST00000486532 BCL11BQ9C0K0 894 aaPredicted RBP10.69□□□□□ -0.7
R3HDM1-217ENST00000486532 NLRP6P59044 892 aa10.68□□□□□ -0.7
R3HDM1-217ENST00000486532 STK24Q9Y6E0 443 aa10.68□□□□□ -0.7
R3HDM1-217ENST00000486532 EMP3P54852 163 aa10.67□□□□□ -0.7
R3HDM1-217ENST00000486532 STK25O00506 426 aa10.66□□□□□ -0.7
R3HDM1-217ENST00000486532 PKD2Q13563 968 aa10.65□□□□□ -0.7
R3HDM1-217ENST00000486532 PHF8Q9UPP1 1060 aa10.63□□□□□ -0.71
R3HDM1-217ENST00000486532 MICALL2Q8IY33 904 aa10.62□□□□□ -0.71
R3HDM1-217ENST00000486532 RIMBP2O15034 1052 aa10.6□□□□□ -0.71
R3HDM1-217ENST00000486532 DOK7Q18PE1 504 aa10.6□□□□□ -0.71
R3HDM1-217ENST00000486532 HS3ST6Q96QI5 342 aa10.6□□□□□ -0.71
R3HDM1-217ENST00000486532 RGL2O15211 777 aa10.59□□□□□ -0.71
R3HDM1-217ENST00000486532 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
R3HDM1-217ENST00000486532 KRTAP3-2Q9BYR7 98 aa10.59□□□□□ -0.71
R3HDM1-217ENST00000486532 ZNF710Q8N1W2 664 aa10.58□□□□□ -0.72
R3HDM1-217ENST00000486532 MS4A4AQ96JQ5 239 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 970.7 ms