RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 CREBZFQ9NS37 354 aa11.15□□□□□ -0.62
PKP4-212ENST00000483881 ATMINO43313 823 aaPredicted RBP11.13□□□□□ -0.63
PKP4-212ENST00000483881 SCUBE2Q9NQ36 999 aa11.13□□□□□ -0.63
PKP4-212ENST00000483881 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
PKP4-212ENST00000483881 MMRN1Q13201 1228 aa11.06□□□□□ -0.64
PKP4-212ENST00000483881 MS4A3Q96HJ5 214 aa11.04□□□□□ -0.64
PKP4-212ENST00000483881 POTEFA5A3E0 1075 aa11□□□□□ -0.65
PKP4-212ENST00000483881 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
PKP4-212ENST00000483881 ATN1P54259 1190 aaPredicted RBP10.97□□□□□ -0.65
PKP4-212ENST00000483881 ST18O60284 1047 aa10.9□□□□□ -0.66
PKP4-212ENST00000483881 MNX1P50219 401 aaPredicted RBP10.85□□□□□ -0.67
PKP4-212ENST00000483881 NPM1P06748 294 aaKnown RBP eCLIP10.84□□□□□ -0.67
PKP4-212ENST00000483881 STAG3Q9UJ98 1225 aa10.82□□□□□ -0.68
PKP4-212ENST00000483881 COLQQ9Y215 455 aaPredicted RBP10.81□□□□□ -0.68
PKP4-212ENST00000483881 BMP2KQ9NSY1 1161 aaPredicted RBP10.79□□□□□ -0.68
PKP4-212ENST00000483881 TRPC6Q9Y210 931 aa10.76□□□□□ -0.69
PKP4-212ENST00000483881 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
PKP4-212ENST00000483881 SEC24BO95487 1268 aa10.71□□□□□ -0.69
PKP4-212ENST00000483881 KIF12Q96FN5 646 aa10.68□□□□□ -0.7
PKP4-212ENST00000483881 TSPYL2Q9H2G4 693 aaPredicted RBP10.68□□□□□ -0.7
PKP4-212ENST00000483881 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
PKP4-212ENST00000483881 TIE1P35590 1138 aa10.64□□□□□ -0.71
PKP4-212ENST00000483881 MARVELD3Q96A59 401 aa10.63□□□□□ -0.71
PKP4-212ENST00000483881 TMEM121BQ9BXQ6 578 aaPredicted RBP10.63□□□□□ -0.71
PKP4-212ENST00000483881 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
PKP4-212ENST00000483881 MAP3K13O43283 966 aa10.57□□□□□ -0.72
PKP4-212ENST00000483881 IER5LQ5T953 404 aa10.54□□□□□ -0.72
PKP4-212ENST00000483881 KRTAP3-3Q9BYR6 98 aa10.53□□□□□ -0.72
PKP4-212ENST00000483881 KRTAP3-2Q9BYR7 98 aa10.53□□□□□ -0.72
PKP4-212ENST00000483881 TRIM35Q9UPQ4 493 aa10.53□□□□□ -0.72
PKP4-212ENST00000483881 POTEB3A0JP26 581 aa10.48□□□□□ -0.73
PKP4-212ENST00000483881 POTEBQ6S5H4 581 aa10.48□□□□□ -0.73
PKP4-212ENST00000483881 SNPHO15079 494 aa10.46□□□□□ -0.73
PKP4-212ENST00000483881 SPDYE4A6NLX3 237 aa10.41□□□□□ -0.74
PKP4-212ENST00000483881 EMP3P54852 163 aa10.4□□□□□ -0.74
PKP4-212ENST00000483881 HS3ST6Q96QI5 342 aa10.4□□□□□ -0.74
PKP4-212ENST00000483881 PLCG2P16885 1265 aa10.39□□□□□ -0.75
PKP4-212ENST00000483881 FAM205CA6NFA0 338 aa10.36□□□□□ -0.75
PKP4-212ENST00000483881 IRX5P78411 483 aaPredicted RBP10.35□□□□□ -0.75
PKP4-212ENST00000483881 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
PKP4-212ENST00000483881 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.33□□□□□ -0.76
PKP4-212ENST00000483881 PCDHB13Q9Y5F0 798 aa10.3□□□□□ -0.76
PKP4-212ENST00000483881 SGIP1Q9BQI5 828 aa10.29□□□□□ -0.76
PKP4-212ENST00000483881 TMEM106CQ9BVX2 250 aa10.28□□□□□ -0.76
PKP4-212ENST00000483881 RNF166Q96A37 237 aaPredicted RBP10.27□□□□□ -0.77
PKP4-212ENST00000483881 OCEL1Q9H607 264 aa10.25□□□□□ -0.77
PKP4-212ENST00000483881 IFNL1Q8IU54 200 aa10.24□□□□□ -0.77
PKP4-212ENST00000483881 MYT1LQ9UL68 1186 aa10.13□□□□□ -0.79
PKP4-212ENST00000483881 C3orf67Q6ZVT6 689 aa10.09□□□□□ -0.79
PKP4-212ENST00000483881 MIER1Q8N108 512 aa10.05□□□□□ -0.8
PKP4-212ENST00000483881 PDCD7Q8N8D1 485 aaKnown RBP10.04□□□□□ -0.8
PKP4-212ENST00000483881 PLEKHG5O94827 1062 aa10.02□□□□□ -0.81
PKP4-212ENST00000483881 ERBB3P21860 1342 aa10.01□□□□□ -0.81
PKP4-212ENST00000483881 HOXB3P14651 431 aaPredicted RBP10□□□□□ -0.81
PKP4-212ENST00000483881 PROM2Q8N271 834 aa10□□□□□ -0.81
PKP4-212ENST00000483881 HOXB1P14653 301 aaPredicted RBP9.99□□□□□ -0.81
PKP4-212ENST00000483881 NUBP1P53384 320 aa9.99□□□□□ -0.81
PKP4-212ENST00000483881 L3MBTL3Q96JM7 780 aaPredicted RBP9.98□□□□□ -0.81
PKP4-212ENST00000483881 VARS2Q5ST30 1063 aaKnown RBP9.92□□□□□ -0.82
PKP4-212ENST00000483881 ZNF710Q8N1W2 664 aa9.89□□□□□ -0.83
PKP4-212ENST00000483881 PCDHB8Q9UN66 801 aa9.89□□□□□ -0.83
PKP4-212ENST00000483881 PTGER2P43116 358 aa9.88□□□□□ -0.83
PKP4-212ENST00000483881 PLA2G2EQ9NZK7 142 aa9.88□□□□□ -0.83
PKP4-212ENST00000483881 ZNF687Q8N1G0 1237 aa9.86□□□□□ -0.83
PKP4-212ENST00000483881 FAM212AQ96EL1 285 aa9.86□□□□□ -0.83
PKP4-212ENST00000483881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.83□□□□□ -0.841e-13■□□□□ 9.7
PKP4-212ENST00000483881 PYGBP11216 843 aa9.82□□□□□ -0.84
PKP4-212ENST00000483881 MKRN3Q13064 507 aaKnown RBP9.82□□□□□ -0.84
PKP4-212ENST00000483881 PLCD3Q8N3E9 789 aa9.82□□□□□ -0.84
PKP4-212ENST00000483881 ANKRD13DQ6ZTN6 518 aa9.81□□□□□ -0.84
PKP4-212ENST00000483881 DOK7Q18PE1 504 aa9.8□□□□□ -0.84
PKP4-212ENST00000483881 DPY19L2Q6NUT2 758 aa9.8□□□□□ -0.84
PKP4-212ENST00000483881 GOLGA2Q08379 1002 aa9.76□□□□□ -0.85
PKP4-212ENST00000483881 ILDR1Q86SU0 546 aaPredicted RBP9.75□□□□□ -0.85
PKP4-212ENST00000483881 CSRNP3Q8WYN3 585 aa9.75□□□□□ -0.85
PKP4-212ENST00000483881 ZBTB47Q9UFB7 747 aaPredicted RBP9.75□□□□□ -0.85
PKP4-212ENST00000483881 BOLA1Q9Y3E2 137 aa9.71□□□□□ -0.86
PKP4-212ENST00000483881 RIMBP2O15034 1052 aa9.7□□□□□ -0.86
PKP4-212ENST00000483881 DCAF8Q5TAQ9 597 aa9.7□□□□□ -0.86
PKP4-212ENST00000483881 HCSTQ9UBK5 93 aa9.67□□□□□ -0.86
PKP4-212ENST00000483881 LSM11P83369 360 aaKnown RBP eCLIP9.66□□□□□ -0.86
PKP4-212ENST00000483881 GPR153Q6NV75 609 aa9.66□□□□□ -0.86
PKP4-212ENST00000483881 G3V3G9 751 aa9.64□□□□□ -0.87
PKP4-212ENST00000483881 ZSWIM6Q9HCJ5 1215 aa9.64□□□□□ -0.87
PKP4-212ENST00000483881 IRX2Q9BZI1 471 aaPredicted RBP9.6□□□□□ -0.87
PKP4-212ENST00000483881 PSEN1P49768 467 aa9.59□□□□□ -0.87
PKP4-212ENST00000483881 ZNF467Q7Z7K2 595 aaPredicted RBP9.59□□□□□ -0.87
PKP4-212ENST00000483881 ARSIQ5FYB1 569 aa9.54□□□□□ -0.88
PKP4-212ENST00000483881 TMEM92Q6UXU6 159 aa9.54□□□□□ -0.88
PKP4-212ENST00000483881 ZNF316A6NFI3 1004 aaPredicted RBP9.53□□□□□ -0.88
PKP4-212ENST00000483881 POTEEQ6S8J3 1075 aa9.51□□□□□ -0.89
PKP4-212ENST00000483881 KHSRPQ92945 711 aaKnown RBP eCLIP9.5□□□□□ -0.89
PKP4-212ENST00000483881 RGS20O76081 388 aa9.48□□□□□ -0.89
PKP4-212ENST00000483881 CABP2Q9NPB3 220 aa9.48□□□□□ -0.89
PKP4-212ENST00000483881 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
PKP4-212ENST00000483881 PBX2P40425 430 aa9.44□□□□□ -0.9
PKP4-212ENST00000483881 CHRM1P11229 460 aaPredicted RBP9.43□□□□□ -0.9
PKP4-212ENST00000483881 PDAP1Q13442 181 aaKnown RBP9.41□□□□□ -0.9
PKP4-212ENST00000483881 ADGRD1Q6QNK2 874 aa9.39□□□□□ -0.91
PKP4-212ENST00000483881 MICALL2Q8IY33 904 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms