RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 MS4A3Q96HJ5 214 aa13.36□□□□□ -0.27
COMMD6-210ENST00000483290 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
COMMD6-210ENST00000483290 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
COMMD6-210ENST00000483290 MAMSTRQ6ZN01 415 aa13.34□□□□□ -0.27
COMMD6-210ENST00000483290 ATMINO43313 823 aaPredicted RBP13.31□□□□□ -0.28
COMMD6-210ENST00000483290 TSPYL2Q9H2G4 693 aaPredicted RBP13.29□□□□□ -0.28
COMMD6-210ENST00000483290 PCDH10Q9P2E7 1040 aa13.27□□□□□ -0.29
COMMD6-210ENST00000483290 SCUBE2Q9NQ36 999 aa13.25□□□□□ -0.29
COMMD6-210ENST00000483290 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
COMMD6-210ENST00000483290 CCDC61Q9Y6R9 512 aa13.19□□□□□ -0.3
COMMD6-210ENST00000483290 ATN1P54259 1190 aaPredicted RBP13.17□□□□□ -0.3
COMMD6-210ENST00000483290 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
COMMD6-210ENST00000483290 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
COMMD6-210ENST00000483290 PROM2Q8N271 834 aa13.13□□□□□ -0.31
COMMD6-210ENST00000483290 FAM163AQ96GL9 167 aaPredicted RBP13.12□□□□□ -0.31
COMMD6-210ENST00000483290 BMP2KQ9NSY1 1161 aaPredicted RBP13.1□□□□□ -0.31
COMMD6-210ENST00000483290 TIE1P35590 1138 aa13.09□□□□□ -0.31
COMMD6-210ENST00000483290 MIER1Q8N108 512 aa13.08□□□□□ -0.32
COMMD6-210ENST00000483290 MAP3K13O43283 966 aa13.05□□□□□ -0.32
COMMD6-210ENST00000483290 SEC24BO95487 1268 aa13.05□□□□□ -0.32
COMMD6-210ENST00000483290 TRPC6Q9Y210 931 aa13.01□□□□□ -0.33
COMMD6-210ENST00000483290 LCE2DQ5TA82 110 aaPredicted RBP13□□□□□ -0.33
COMMD6-210ENST00000483290 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
COMMD6-210ENST00000483290 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
COMMD6-210ENST00000483290 TTLL13PA6NNM8 815 aa12.96□□□□□ -0.33
COMMD6-210ENST00000483290 PLCD3Q8N3E9 789 aa12.95□□□□□ -0.34
COMMD6-210ENST00000483290 SGIP1Q9BQI5 828 aa12.94□□□□□ -0.34
COMMD6-210ENST00000483290 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
COMMD6-210ENST00000483290 IER5LQ5T953 404 aa12.93□□□□□ -0.34
COMMD6-210ENST00000483290 PCDHB13Q9Y5F0 798 aa12.92□□□□□ -0.34
COMMD6-210ENST00000483290 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
COMMD6-210ENST00000483290 COLQQ9Y215 455 aaPredicted RBP12.91□□□□□ -0.34
COMMD6-210ENST00000483290 CDAN1Q8IWY9 1227 aa12.84□□□□□ -0.35
COMMD6-210ENST00000483290 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
COMMD6-210ENST00000483290 PLCG2P16885 1265 aa12.81□□□□□ -0.36
COMMD6-210ENST00000483290 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
COMMD6-210ENST00000483290 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
COMMD6-210ENST00000483290 NUBP1P53384 320 aa12.77□□□□□ -0.37
COMMD6-210ENST00000483290 IFNL1Q8IU54 200 aa12.77□□□□□ -0.37
COMMD6-210ENST00000483290 ST18O60284 1047 aa12.73□□□□□ -0.37
COMMD6-210ENST00000483290 SNPHO15079 494 aa12.66□□□□□ -0.38
COMMD6-210ENST00000483290 IRX5P78411 483 aaPredicted RBP12.66□□□□□ -0.38
COMMD6-210ENST00000483290 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
COMMD6-210ENST00000483290 OCEL1Q9H607 264 aa12.65□□□□□ -0.38
COMMD6-210ENST00000483290 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.63□□□□□ -0.39
COMMD6-210ENST00000483290 DCAF8Q5TAQ9 597 aa12.62□□□□□ -0.39
COMMD6-210ENST00000483290 PYGBP11216 843 aa12.58□□□□□ -0.4
COMMD6-210ENST00000483290 GOLGA2Q08379 1002 aa12.52□□□□□ -0.41
COMMD6-210ENST00000483290 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
COMMD6-210ENST00000483290 FKBP8Q14318 412 aa12.51□□□□□ -0.41
COMMD6-210ENST00000483290 SPNS2Q8IVW8 549 aa12.51□□□□□ -0.41
COMMD6-210ENST00000483290 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
COMMD6-210ENST00000483290 PCDHB8Q9UN66 801 aa12.5□□□□□ -0.41
COMMD6-210ENST00000483290 MARVELD3Q96A59 401 aa12.48□□□□□ -0.41
COMMD6-210ENST00000483290 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
COMMD6-210ENST00000483290 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
COMMD6-210ENST00000483290 ZNF467Q7Z7K2 595 aaPredicted RBP12.46□□□□□ -0.41
COMMD6-210ENST00000483290 L3MBTL3Q96JM7 780 aaPredicted RBP12.46□□□□□ -0.41
COMMD6-210ENST00000483290 EMP3P54852 163 aa12.43□□□□□ -0.42
COMMD6-210ENST00000483290 GSE1Q14687 1217 aa12.43□□□□□ -0.42
COMMD6-210ENST00000483290 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
COMMD6-210ENST00000483290 PDCD7Q8N8D1 485 aaKnown RBP12.39□□□□□ -0.43
COMMD6-210ENST00000483290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.36□□□□□ -0.43
COMMD6-210ENST00000483290 FAM205CA6NFA0 338 aa12.31□□□□□ -0.44
COMMD6-210ENST00000483290 G3V3G9 751 aa12.31□□□□□ -0.44
COMMD6-210ENST00000483290 PSEN1P49768 467 aa12.31□□□□□ -0.44
COMMD6-210ENST00000483290 HS3ST6Q96QI5 342 aa12.31□□□□□ -0.44
COMMD6-210ENST00000483290 CHRM1P11229 460 aaPredicted RBP12.29□□□□□ -0.44
COMMD6-210ENST00000483290 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
COMMD6-210ENST00000483290 PDAP1Q13442 181 aaKnown RBP12.23□□□□□ -0.45
COMMD6-210ENST00000483290 KRTAP3-3Q9BYR6 98 aa12.23□□□□□ -0.45
COMMD6-210ENST00000483290 KRTAP3-2Q9BYR7 98 aa12.23□□□□□ -0.45
COMMD6-210ENST00000483290 ZNF710Q8N1W2 664 aa12.19□□□□□ -0.46
COMMD6-210ENST00000483290 BOLA1Q9Y3E2 137 aa12.19□□□□□ -0.46
COMMD6-210ENST00000483290 POTEB3A0JP26 581 aa12.18□□□□□ -0.46
COMMD6-210ENST00000483290 POTEBQ6S5H4 581 aa12.18□□□□□ -0.46
COMMD6-210ENST00000483290 ILDR1Q86SU0 546 aaPredicted RBP12.17□□□□□ -0.46
COMMD6-210ENST00000483290 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
COMMD6-210ENST00000483290 DPY19L2Q6NUT2 758 aa12.15□□□□□ -0.46
COMMD6-210ENST00000483290 DOK7Q18PE1 504 aa12.14□□□□□ -0.47
COMMD6-210ENST00000483290 ERBB3P21860 1342 aa12.11□□□□□ -0.47
COMMD6-210ENST00000483290 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
COMMD6-210ENST00000483290 HOXB1P14653 301 aaPredicted RBP12.11□□□□□ -0.47
COMMD6-210ENST00000483290 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
COMMD6-210ENST00000483290 HOXB3P14651 431 aaPredicted RBP12.1□□□□□ -0.47
COMMD6-210ENST00000483290 SPOCK2Q92563 424 aa12.08□□□□□ -0.48
COMMD6-210ENST00000483290 RNF166Q96A37 237 aaPredicted RBP12.04□□□□□ -0.48
COMMD6-210ENST00000483290 VARS2Q5ST30 1063 aaKnown RBP11.99□□□□□ -0.49
COMMD6-210ENST00000483290 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
COMMD6-210ENST00000483290 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
COMMD6-210ENST00000483290 MYT1LQ9UL68 1186 aa11.96□□□□□ -0.49
COMMD6-210ENST00000483290 EFCAB3Q8N7B9 438 aa11.95□□□□□ -0.5
COMMD6-210ENST00000483290 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
COMMD6-210ENST00000483290 PTGER2P43116 358 aa11.92□□□□□ -0.5
COMMD6-210ENST00000483290 ZNF687Q8N1G0 1237 aa11.91□□□□□ -0.5
COMMD6-210ENST00000483290 MICALL2Q8IY33 904 aa11.9□□□□□ -0.5
COMMD6-210ENST00000483290 SOX12O15370 315 aa11.85□□□□□ -0.51
COMMD6-210ENST00000483290 GPR153Q6NV75 609 aa11.82□□□□□ -0.52
COMMD6-210ENST00000483290 TMEM92Q6UXU6 159 aa11.82□□□□□ -0.52
COMMD6-210ENST00000483290 ANKRD13DQ6ZTN6 518 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms