RNA–Protein interactions for RNA: ENST00000482871.5

MSL3-215, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-215ENST00000482871 SHROOM4Q9ULL8 1493 aa14.42□□□□□ -0.1
MSL3-215ENST00000482871 FARP1Q9Y4F1 1045 aaPredicted RBP14.4□□□□□ -0.1
MSL3-215ENST00000482871 MNX1P50219 401 aaPredicted RBP14.36□□□□□ -0.11
MSL3-215ENST00000482871 NPM1P06748 294 aaKnown RBP eCLIP14.35□□□□□ -0.11
MSL3-215ENST00000482871 HAP1P54257 671 aaPredicted RBP14.31□□□□□ -0.12
MSL3-215ENST00000482871 SPOCK2Q92563 424 aa14.28□□□□□ -0.12
MSL3-215ENST00000482871 BCANQ96GW7 911 aa14.27□□□□□ -0.13
MSL3-215ENST00000482871 HAX1O00165 279 aa14.2□□□□□ -0.14
MSL3-215ENST00000482871 NUBP1P53384 320 aa14.2□□□□□ -0.14
MSL3-215ENST00000482871 RASEFQ8IZ41 740 aa14.17□□□□□ -0.14
MSL3-215ENST00000482871 PRKCSHP14314 528 aaPredicted RBP14.16□□□□□ -0.14
MSL3-215ENST00000482871 SP7Q8TDD2 431 aaPredicted RBP14.16□□□□□ -0.14
MSL3-215ENST00000482871 TSPYL2Q9H2G4 693 aaPredicted RBP14.16□□□□□ -0.14
MSL3-215ENST00000482871 CD44P16070 742 aaKnown RBP14.15□□□□□ -0.14
MSL3-215ENST00000482871 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
MSL3-215ENST00000482871 DCAF8Q5TAQ9 597 aa14.14□□□□□ -0.15
MSL3-215ENST00000482871 VSIG10Q8N0Z9 540 aa14.14□□□□□ -0.15
MSL3-215ENST00000482871 FAM212AQ96EL1 285 aa14.14□□□□□ -0.15
MSL3-215ENST00000482871 TAOK2Q9UL54 1235 aa14.13□□□□□ -0.15
MSL3-215ENST00000482871 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
MSL3-215ENST00000482871 EIF4G1Q04637 1599 aaKnown RBP14.13□□□□□ -0.15
MSL3-215ENST00000482871 C19orf67A6NJJ6 358 aa14.11□□□□□ -0.15
MSL3-215ENST00000482871 ZRANB1Q9UGI0 708 aa14.08□□□□□ -0.16
MSL3-215ENST00000482871 GSE1Q14687 1217 aa14.06□□□□□ -0.16
MSL3-215ENST00000482871 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
MSL3-215ENST00000482871 CC2D2AQ9P2K1 1620 aa14.04□□□□□ -0.16
MSL3-215ENST00000482871 PKD2Q13563 968 aa14.02□□□□□ -0.17
MSL3-215ENST00000482871 EVX2Q03828 476 aa14.01□□□□□ -0.17
MSL3-215ENST00000482871 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
MSL3-215ENST00000482871 SMARCA4P51532 1647 aa13.99□□□□□ -0.17
MSL3-215ENST00000482871 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
MSL3-215ENST00000482871 PHF12Q96QT6 1004 aa13.95□□□□□ -0.18
MSL3-215ENST00000482871 PYGBP11216 843 aa13.94□□□□□ -0.18
MSL3-215ENST00000482871 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
MSL3-215ENST00000482871 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
MSL3-215ENST00000482871 ECM2O94769 699 aaPredicted RBP13.91□□□□□ -0.18
MSL3-215ENST00000482871 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
MSL3-215ENST00000482871 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
MSL3-215ENST00000482871 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
MSL3-215ENST00000482871 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
MSL3-215ENST00000482871 BBXQ8WY36 941 aaPredicted RBP13.87□□□□□ -0.19
MSL3-215ENST00000482871 KDM2AQ9Y2K7 1162 aa13.87□□□□□ -0.19
MSL3-215ENST00000482871 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
MSL3-215ENST00000482871 KIF12Q96FN5 646 aa13.84□□□□□ -0.19
MSL3-215ENST00000482871 NCAPD3P42695 1498 aa13.83□□□□□ -0.2
MSL3-215ENST00000482871 MAP3K13O43283 966 aa13.83□□□□□ -0.2
MSL3-215ENST00000482871 PEG3Q9GZU2 1588 aa13.82□□□□□ -0.2
MSL3-215ENST00000482871 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
MSL3-215ENST00000482871 CHRM1P11229 460 aaPredicted RBP13.81□□□□□ -0.2
MSL3-215ENST00000482871 PCDHB13Q9Y5F0 798 aa13.81□□□□□ -0.2
MSL3-215ENST00000482871 WIZO95785 1651 aa13.81□□□□□ -0.2
MSL3-215ENST00000482871 PAXIP1Q6ZW49 1069 aaPredicted RBP13.78□□□□□ -0.2
MSL3-215ENST00000482871 BAZ1BQ9UIG0 1483 aaKnown RBP13.78□□□□□ -0.2
MSL3-215ENST00000482871 HMGXB3Q12766 1538 aa13.77□□□□□ -0.21
MSL3-215ENST00000482871 MS4A3Q96HJ5 214 aa13.76□□□□□ -0.21
MSL3-215ENST00000482871 GABBR2O75899 941 aa13.75□□□□□ -0.21
MSL3-215ENST00000482871 PCDHB8Q9UN66 801 aa13.75□□□□□ -0.21
MSL3-215ENST00000482871 RGL2O15211 777 aa13.74□□□□□ -0.21
MSL3-215ENST00000482871 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
MSL3-215ENST00000482871 CLCN6P51797 869 aa13.74□□□□□ -0.21
MSL3-215ENST00000482871 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
MSL3-215ENST00000482871 IFNL1Q8IU54 200 aa13.73□□□□□ -0.21
MSL3-215ENST00000482871 SGIP1Q9BQI5 828 aa13.73□□□□□ -0.21
MSL3-215ENST00000482871 ZNF467Q7Z7K2 595 aaPredicted RBP13.72□□□□□ -0.21
MSL3-215ENST00000482871 RNF25Q96BH1 459 aaPredicted RBP13.71□□□□□ -0.21
MSL3-215ENST00000482871 RIOK3O14730 519 aaKnown RBP13.7□□□□□ -0.22
MSL3-215ENST00000482871 SUPT5HO00267 1087 aaKnown RBP13.67□□□□□ -0.22
MSL3-215ENST00000482871 TOP2AP11388 1531 aaKnown RBP13.64□□□□□ -0.23
MSL3-215ENST00000482871 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
MSL3-215ENST00000482871 SPRYD3Q8NCJ5 442 aa13.62□□□□□ -0.23
MSL3-215ENST00000482871 VGFO15240 615 aaPredicted RBP13.61□□□□□ -0.23
MSL3-215ENST00000482871 PSEN1P49768 467 aa13.6□□□□□ -0.23
MSL3-215ENST00000482871 PDAP1Q13442 181 aaKnown RBP13.6□□□□□ -0.23
MSL3-215ENST00000482871 DCBLD2Q96PD2 775 aa13.59□□□□□ -0.23
MSL3-215ENST00000482871 TSHZ2Q9NRE2 1034 aa13.59□□□□□ -0.23
MSL3-215ENST00000482871 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.56□□□□□ -0.24
MSL3-215ENST00000482871 ZFP91Q96JP5 570 aaPredicted RBP13.56□□□□□ -0.24
MSL3-215ENST00000482871 TMEM106CQ9BVX2 250 aa13.56□□□□□ -0.24
MSL3-215ENST00000482871 TIE1P35590 1138 aa13.55□□□□□ -0.24
MSL3-215ENST00000482871 BMP2KQ9NSY1 1161 aaPredicted RBP13.54□□□□□ -0.24
MSL3-215ENST00000482871 STK25O00506 426 aa13.52□□□□□ -0.25
MSL3-215ENST00000482871 TTLL13PA6NNM8 815 aa13.51□□□□□ -0.25
MSL3-215ENST00000482871 CHGAP10645 457 aaKnown RBP13.51□□□□□ -0.25
MSL3-215ENST00000482871 STK24Q9Y6E0 443 aa13.5□□□□□ -0.25
MSL3-215ENST00000482871 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
MSL3-215ENST00000482871 BCL11BQ9C0K0 894 aaPredicted RBP13.49□□□□□ -0.25
MSL3-215ENST00000482871 ATMINO43313 823 aaPredicted RBP13.47□□□□□ -0.25
MSL3-215ENST00000482871 ATN1P54259 1190 aaPredicted RBP13.47□□□□□ -0.25
MSL3-215ENST00000482871 NESP48681 1621 aa13.46□□□□□ -0.25
MSL3-215ENST00000482871 GOLGA2Q08379 1002 aa13.46□□□□□ -0.25
MSL3-215ENST00000482871 ASTLQ6HA08 431 aaPredicted RBP13.46□□□□□ -0.25
MSL3-215ENST00000482871 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
MSL3-215ENST00000482871 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
MSL3-215ENST00000482871 NBR1Q14596 966 aa13.45□□□□□ -0.26
MSL3-215ENST00000482871 CABP2Q9NPB3 220 aa13.45□□□□□ -0.26
MSL3-215ENST00000482871 POTEIP0CG38 1075 aa13.44□□□□□ -0.26
MSL3-215ENST00000482871 DNAJC5Q9H3Z4 198 aa13.44□□□□□ -0.26
MSL3-215ENST00000482871 TRIM35Q9UPQ4 493 aa13.44□□□□□ -0.26
MSL3-215ENST00000482871 HS6ST3Q8IZP7 471 aa13.42□□□□□ -0.26
MSL3-215ENST00000482871 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms