RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 TRIM41Q8WV44 630 aa14.78□□□□□ -0.04
NUP35-209ENST00000479162 WIZO95785 1651 aa14.78□□□□□ -0.04
NUP35-209ENST00000479162 NPM2Q86SE8 214 aaKnown RBP14.76□□□□□ -0.05
NUP35-209ENST00000479162 PAXIP1Q6ZW49 1069 aaPredicted RBP14.74□□□□□ -0.05
NUP35-209ENST00000479162 ZNF326Q5BKZ1 582 aaKnown RBP14.73□□□□□ -0.05
NUP35-209ENST00000479162 RSPH4AQ5TD94 716 aa14.72□□□□□ -0.05
NUP35-209ENST00000479162 PRDM2Q13029 1718 aa14.7□□□□□ -0.06
NUP35-209ENST00000479162 CCER1Q8TC90 406 aaPredicted RBP14.68□□□□□ -0.06
NUP35-209ENST00000479162 LAMC3Q9Y6N6 1575 aa14.67□□□□□ -0.06
NUP35-209ENST00000479162 HAP1P54257 671 aaPredicted RBP14.67□□□□□ -0.06
NUP35-209ENST00000479162 NAP1L5Q96NT1 182 aaPredicted RBP14.66□□□□□ -0.06
NUP35-209ENST00000479162 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
NUP35-209ENST00000479162 MIER1Q8N108 512 aa14.62□□□□□ -0.07
NUP35-209ENST00000479162 C14orf37Q86TY3 774 aa14.61□□□□□ -0.07
NUP35-209ENST00000479162 LOC105371045A0A1W2PR82 267 aa14.61□□□□□ -0.07
NUP35-209ENST00000479162 ZNF316A6NFI3 1004 aaPredicted RBP14.58□□□□□ -0.08
NUP35-209ENST00000479162 NAP1L2Q9ULW6 460 aaPredicted RBP14.57□□□□□ -0.08
NUP35-209ENST00000479162 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
NUP35-209ENST00000479162 RTL5Q5HYW3 569 aaPredicted RBP14.55□□□□□ -0.08
NUP35-209ENST00000479162 NBR1Q14596 966 aa14.54□□□□□ -0.08
NUP35-209ENST00000479162 C11orf95C9JLR9 678 aaPredicted RBP14.53□□□□□ -0.08
NUP35-209ENST00000479162 CFTRP13569 1480 aa14.49□□□□□ -0.09
NUP35-209ENST00000479162 BCANQ96GW7 911 aa14.49□□□□□ -0.09
NUP35-209ENST00000479162 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
NUP35-209ENST00000479162 CADPSQ9ULU8 1353 aa14.45□□□□□ -0.1
NUP35-209ENST00000479162 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
NUP35-209ENST00000479162 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
NUP35-209ENST00000479162 CHMP4BQ9H444 224 aaKnown RBP14.44□□□□□ -0.1
NUP35-209ENST00000479162 RRP9O43818 475 aaKnown RBP14.43□□□□□ -0.1
NUP35-209ENST00000479162 IPO4Q8TEX9 1081 aaKnown RBP14.43□□□□□ -0.1
NUP35-209ENST00000479162 BBXQ8WY36 941 aaPredicted RBP14.43□□□□□ -0.1
NUP35-209ENST00000479162 HSP90AA2PQ14568 343 aaPredicted RBP14.42□□□□□ -0.1
NUP35-209ENST00000479162 THOC2Q8NI27 1593 aaKnown RBP14.41□□□□□ -0.1
NUP35-209ENST00000479162 NOP58Q9Y2X3 529 aaKnown RBP14.4□□□□□ -0.1
NUP35-209ENST00000479162 PDS5BQ9NTI5 1447 aa14.4□□□□□ -0.1
NUP35-209ENST00000479162 BCCIPQ9P287 314 aaKnown RBP eCLIP14.39□□□□□ -0.11
NUP35-209ENST00000479162 KIF21AQ7Z4S6 1674 aa14.38□□□□□ -0.11
NUP35-209ENST00000479162 CDK11AQ9UQ88 783 aaPredicted RBP14.38□□□□□ -0.11
NUP35-209ENST00000479162 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
NUP35-209ENST00000479162 CUX2O14529 1486 aa14.37□□□□□ -0.11
NUP35-209ENST00000479162 FKBP8Q14318 412 aa14.37□□□□□ -0.11
NUP35-209ENST00000479162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.35□□□□□ -0.11
NUP35-209ENST00000479162 WDR62O43379 1518 aa14.35□□□□□ -0.11
NUP35-209ENST00000479162 CDK11BP21127 795 aaKnown RBP14.34□□□□□ -0.11
NUP35-209ENST00000479162 HSP90B1P14625 803 aaKnown RBP14.34□□□□□ -0.11
NUP35-209ENST00000479162 ZFP91Q96JP5 570 aaPredicted RBP14.33□□□□□ -0.11
NUP35-209ENST00000479162 GTF2E1P29083 439 aaPredicted RBP14.33□□□□□ -0.12
NUP35-209ENST00000479162 WASHC2CQ9Y4E1 1318 aa14.32□□□□□ -0.12
NUP35-209ENST00000479162 CANXP27824 592 aaKnown RBP14.31□□□□□ -0.12
NUP35-209ENST00000479162 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
NUP35-209ENST00000479162 IRX6P78412 446 aaPredicted RBP14.3□□□□□ -0.12
NUP35-209ENST00000479162 NESP48681 1621 aa14.3□□□□□ -0.12
NUP35-209ENST00000479162 MRC2Q9UBG0 1479 aa14.29□□□□□ -0.12
NUP35-209ENST00000479162 FAM43AQ8N2R8 423 aa14.28□□□□□ -0.12
NUP35-209ENST00000479162 BRPF3Q9ULD4 1205 aa14.28□□□□□ -0.12
NUP35-209ENST00000479162 CEP164Q9UPV0 1460 aa14.28□□□□□ -0.12
NUP35-209ENST00000479162 TEX2Q8IWB9 1127 aa14.28□□□□□ -0.12
NUP35-209ENST00000479162 WASHC2AQ641Q2 1341 aa14.28□□□□□ -0.12
NUP35-209ENST00000479162 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
NUP35-209ENST00000479162 PRDM4Q9UKN5 801 aa14.27□□□□□ -0.12
NUP35-209ENST00000479162 WDR97A6NE52 1622 aa14.27□□□□□ -0.13
NUP35-209ENST00000479162 CNGB1Q14028 1251 aaPredicted RBP14.26□□□□□ -0.13
NUP35-209ENST00000479162 CALD1Q05682 793 aaKnown RBP14.25□□□□□ -0.13
NUP35-209ENST00000479162 ITGAEP38570 1179 aa14.25□□□□□ -0.13
NUP35-209ENST00000479162 FTSJ3Q8IY81 847 aaKnown RBP14.25□□□□□ -0.13
NUP35-209ENST00000479162 STAC3Q96MF2 364 aa14.24□□□□□ -0.13
NUP35-209ENST00000479162 TPRNQ4KMQ1 711 aa14.23□□□□□ -0.13
NUP35-209ENST00000479162 HSP90AA1P07900 732 aaKnown RBP14.23□□□□□ -0.13
NUP35-209ENST00000479162 ERCC6Q03468 1493 aa14.23□□□□□ -0.13
NUP35-209ENST00000479162 DNMBPQ6XZF7 1577 aa14.23□□□□□ -0.13
NUP35-209ENST00000479162 CHRM1P11229 460 aaPredicted RBP14.21□□□□□ -0.13
NUP35-209ENST00000479162 SECISBP2LQ93073 1101 aaKnown RBP14.21□□□□□ -0.13
NUP35-209ENST00000479162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.21□□□□□ -0.14
NUP35-209ENST00000479162 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
NUP35-209ENST00000479162 NEFMP07197 916 aa14.19□□□□□ -0.14
NUP35-209ENST00000479162 RGS3P49796 1198 aa14.19□□□□□ -0.14
NUP35-209ENST00000479162 SUPT5HO00267 1087 aaKnown RBP14.19□□□□□ -0.14
NUP35-209ENST00000479162 BIVM-ERCC5R4GMW8 1640 aa14.18□□□□□ -0.14
NUP35-209ENST00000479162 USP35Q9P2H5 1018 aa14.18□□□□□ -0.14
NUP35-209ENST00000479162 URB2Q14146 1524 aaKnown RBP14.14□□□□□ -0.15
NUP35-209ENST00000479162 CENPJQ9HC77 1338 aaPredicted RBP14.12□□□□□ -0.15
NUP35-209ENST00000479162 PPM1GO15355 546 aaPredicted RBP14.11□□□□□ -0.15
NUP35-209ENST00000479162 NCLP19338 710 aaKnown RBP14.11□□□□□ -0.15
NUP35-209ENST00000479162 TOPBP1Q92547 1522 aa14.11□□□□□ -0.15
NUP35-209ENST00000479162 CNPY4Q8N129 248 aa14.1□□□□□ -0.15
NUP35-209ENST00000479162 POLR3GLQ9BT43 218 aa14.1□□□□□ -0.15
NUP35-209ENST00000479162 TOP2BQ02880 1626 aa14.09□□□□□ -0.15
NUP35-209ENST00000479162 ARID4BQ4LE39 1312 aaPredicted RBP14.08□□□□□ -0.15
NUP35-209ENST00000479162 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
NUP35-209ENST00000479162 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
NUP35-209ENST00000479162 TARBP1Q13395 1621 aaKnown RBP14.06□□□□□ -0.16
NUP35-209ENST00000479162 FOXD1Q16676 465 aa14.05□□□□□ -0.16
NUP35-209ENST00000479162 CUX1P39880 1505 aa14.04□□□□□ -0.16
NUP35-209ENST00000479162 ZBTB47Q9UFB7 747 aaPredicted RBP14.04□□□□□ -0.16
NUP35-209ENST00000479162 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.17
NUP35-209ENST00000479162 GSE1Q14687 1217 aa14.01□□□□□ -0.17
NUP35-209ENST00000479162 IPO9Q96P70 1041 aaKnown RBP14.01□□□□□ -0.17
NUP35-209ENST00000479162 KCNA4P22459 653 aa14□□□□□ -0.17
NUP35-209ENST00000479162 PDCL3Q9H2J4 239 aa14□□□□□ -0.17
NUP35-209ENST00000479162 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms