RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 TRIM41Q8WV44 630 aa10.51□□□□□ -0.73
SMARCA1-204ENST00000478420 TSPYL2Q9H2G4 693 aaPredicted RBP10.47□□□□□ -0.73
SMARCA1-204ENST00000478420 PAK3O75914 559 aaPredicted RBP10.45□□□□□ -0.74
SMARCA1-204ENST00000478420 DCAF8L2P0C7V8 631 aa10.44□□□□□ -0.74
SMARCA1-204ENST00000478420 RGL2O15211 777 aa10.4□□□□□ -0.74
SMARCA1-204ENST00000478420 EVX2Q03828 476 aa10.4□□□□□ -0.74
SMARCA1-204ENST00000478420 CHRM1P11229 460 aaPredicted RBP10.39□□□□□ -0.75
SMARCA1-204ENST00000478420 CD44P16070 742 aaKnown RBP10.39□□□□□ -0.75
SMARCA1-204ENST00000478420 PYGBP11216 843 aa10.38□□□□□ -0.75
SMARCA1-204ENST00000478420 CCDC61Q9Y6R9 512 aa10.36□□□□□ -0.75
SMARCA1-204ENST00000478420 ZRANB1Q9UGI0 708 aa10.35□□□□□ -0.75
SMARCA1-204ENST00000478420 C19orf67A6NJJ6 358 aa10.33□□□□□ -0.76
SMARCA1-204ENST00000478420 RIOK3O14730 519 aaKnown RBP10.32□□□□□ -0.76
SMARCA1-204ENST00000478420 RNF25Q96BH1 459 aaPredicted RBP10.32□□□□□ -0.76
SMARCA1-204ENST00000478420 TAOK2Q9UL54 1235 aa10.32□□□□□ -0.76
SMARCA1-204ENST00000478420 ZNF467Q7Z7K2 595 aaPredicted RBP10.28□□□□□ -0.76
SMARCA1-204ENST00000478420 VGFO15240 615 aaPredicted RBP10.26□□□□□ -0.77
SMARCA1-204ENST00000478420 KIF12Q96FN5 646 aa10.26□□□□□ -0.77
SMARCA1-204ENST00000478420 ZNF579Q8NAF0 562 aaKnown RBP10.25□□□□□ -0.77
SMARCA1-204ENST00000478420 PHF12Q96QT6 1004 aa10.25□□□□□ -0.77
SMARCA1-204ENST00000478420 SGIP1Q9BQI5 828 aa10.25□□□□□ -0.77
SMARCA1-204ENST00000478420 PCDHB13Q9Y5F0 798 aa10.25□□□□□ -0.77
SMARCA1-204ENST00000478420 MAP3K13O43283 966 aa10.24□□□□□ -0.77
SMARCA1-204ENST00000478420 CHGAP10645 457 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-204ENST00000478420 LHX8Q68G74 356 aa10.23□□□□□ -0.77
SMARCA1-204ENST00000478420 PCDHB8Q9UN66 801 aa10.22□□□□□ -0.77
SMARCA1-204ENST00000478420 PDAP1Q13442 181 aaKnown RBP10.19□□□□□ -0.78
SMARCA1-204ENST00000478420 IFNL1Q8IU54 200 aa10.19□□□□□ -0.78
SMARCA1-204ENST00000478420 HS6ST3Q8IZP7 471 aa10.19□□□□□ -0.78
SMARCA1-204ENST00000478420 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.18□□□□□ -0.78
SMARCA1-204ENST00000478420 STK25O00506 426 aa10.18□□□□□ -0.78
SMARCA1-204ENST00000478420 BBXQ8WY36 941 aaPredicted RBP10.18□□□□□ -0.78
SMARCA1-204ENST00000478420 ZFP91Q96JP5 570 aaPredicted RBP10.18□□□□□ -0.78
SMARCA1-204ENST00000478420 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.16□□□□□ -0.78
SMARCA1-204ENST00000478420 PSEN1P49768 467 aa10.15□□□□□ -0.78
SMARCA1-204ENST00000478420 GABBR2O75899 941 aa10.14□□□□□ -0.79
SMARCA1-204ENST00000478420 CLCN6P51797 869 aa10.14□□□□□ -0.79
SMARCA1-204ENST00000478420 BCL11BQ9C0K0 894 aaPredicted RBP10.14□□□□□ -0.79
SMARCA1-204ENST00000478420 STK24Q9Y6E0 443 aa10.14□□□□□ -0.79
SMARCA1-204ENST00000478420 MS4A3Q96HJ5 214 aa10.13□□□□□ -0.79
SMARCA1-204ENST00000478420 PLSCR2Q9NRY7 297 aa10.12□□□□□ -0.79
SMARCA1-204ENST00000478420 DNAJC5Q9H3Z4 198 aa10.1□□□□□ -0.79
SMARCA1-204ENST00000478420 PLCB2Q00722 1185 aa10.09□□□□□ -0.79
SMARCA1-204ENST00000478420 GALR2O43603 387 aaPredicted RBP10.07□□□□□ -0.8
SMARCA1-204ENST00000478420 SLC24A1O60721 1099 aa10.05□□□□□ -0.8
SMARCA1-204ENST00000478420 PAXIP1Q6ZW49 1069 aaPredicted RBP10.05□□□□□ -0.8
SMARCA1-204ENST00000478420 SPRYD3Q8NCJ5 442 aa10.05□□□□□ -0.8
SMARCA1-204ENST00000478420 TRPC6Q9Y210 931 aa10.05□□□□□ -0.8
SMARCA1-204ENST00000478420 CFAP44Q96MT7 982 aa10.04□□□□□ -0.8
SMARCA1-204ENST00000478420 TMEM106CQ9BVX2 250 aa10.04□□□□□ -0.8
SMARCA1-204ENST00000478420 TIE1P35590 1138 aa10.03□□□□□ -0.8
SMARCA1-204ENST00000478420 NKX1-1Q15270 411 aaPredicted RBP10.02□□□□□ -0.81
SMARCA1-204ENST00000478420 CABP2Q9NPB3 220 aa10.02□□□□□ -0.81
SMARCA1-204ENST00000478420 GOLGA2Q08379 1002 aa10□□□□□ -0.81
SMARCA1-204ENST00000478420 TTLL13PA6NNM8 815 aa9.99□□□□□ -0.81
SMARCA1-204ENST00000478420 RYDENQ9NUL5 291 aaKnown RBP9.99□□□□□ -0.81
SMARCA1-204ENST00000478420 BMP2KQ9NSY1 1161 aaPredicted RBP9.98□□□□□ -0.81
SMARCA1-204ENST00000478420 EFCAB3Q8N7B9 438 aa9.97□□□□□ -0.81
SMARCA1-204ENST00000478420 GTPBP6O43824 516 aaPredicted RBP9.96□□□□□ -0.82
SMARCA1-204ENST00000478420 HAP1P54257 671 aaPredicted RBP9.96□□□□□ -0.82
SMARCA1-204ENST00000478420 SOX12O15370 315 aa9.95□□□□□ -0.82
SMARCA1-204ENST00000478420 MKRN3Q13064 507 aaKnown RBP9.94□□□□□ -0.82
SMARCA1-204ENST00000478420 DCBLD2Q96PD2 775 aa9.93□□□□□ -0.82
SMARCA1-204ENST00000478420 TRIM35Q9UPQ4 493 aa9.93□□□□□ -0.82
SMARCA1-204ENST00000478420 MFRPQ9BY79 579 aa9.92□□□□□ -0.82
SMARCA1-204ENST00000478420 ATMINO43313 823 aaPredicted RBP9.91□□□□□ -0.82
SMARCA1-204ENST00000478420 POTEIP0CG38 1075 aa9.91□□□□□ -0.82
SMARCA1-204ENST00000478420 NLRP6P59044 892 aa9.91□□□□□ -0.82
SMARCA1-204ENST00000478420 ASTLQ6HA08 431 aaPredicted RBP9.91□□□□□ -0.82
SMARCA1-204ENST00000478420 ATN1P54259 1190 aaPredicted RBP9.9□□□□□ -0.82
SMARCA1-204ENST00000478420 PHF8Q9UPP1 1060 aa9.89□□□□□ -0.83
SMARCA1-204ENST00000478420 FBXO22Q8NEZ5 403 aa9.86□□□□□ -0.83
SMARCA1-204ENST00000478420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.85□□□□□ -0.837e-21■■■□□ 16.8
SMARCA1-204ENST00000478420 TSHZ2Q9NRE2 1034 aa9.84□□□□□ -0.83
SMARCA1-204ENST00000478420 IER5LQ5T953 404 aa9.83□□□□□ -0.84
SMARCA1-204ENST00000478420 MS4A4AQ96JQ5 239 aa9.81□□□□□ -0.84
SMARCA1-204ENST00000478420 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
SMARCA1-204ENST00000478420 VSIG10Q8N0Z9 540 aa9.8□□□□□ -0.84
SMARCA1-204ENST00000478420 PPP1R37O75864 691 aa9.79□□□□□ -0.84
SMARCA1-204ENST00000478420 ILDR1Q86SU0 546 aaPredicted RBP9.79□□□□□ -0.84
SMARCA1-204ENST00000478420 IRX5P78411 483 aaPredicted RBP9.78□□□□□ -0.84
SMARCA1-204ENST00000478420 SLC39A7Q92504 469 aa9.78□□□□□ -0.84
SMARCA1-204ENST00000478420 OCEL1Q9H607 264 aa9.78□□□□□ -0.84
SMARCA1-204ENST00000478420 PLCG2P16885 1265 aa9.77□□□□□ -0.85
SMARCA1-204ENST00000478420 SEC24BO95487 1268 aa9.76□□□□□ -0.85
SMARCA1-204ENST00000478420 C7P10643 843 aa9.76□□□□□ -0.85
SMARCA1-204ENST00000478420 PDCD7Q8N8D1 485 aaKnown RBP9.74□□□□□ -0.85
SMARCA1-204ENST00000478420 METRNQ9UJH8 293 aa9.73□□□□□ -0.85
SMARCA1-204ENST00000478420 DPY19L2Q6NUT2 758 aa9.72□□□□□ -0.85
SMARCA1-204ENST00000478420 KDM2AQ9Y2K7 1162 aa9.72□□□□□ -0.85
SMARCA1-204ENST00000478420 G3V3G9 751 aa9.7□□□□□ -0.86
SMARCA1-204ENST00000478420 COLQQ9Y215 455 aaPredicted RBP9.7□□□□□ -0.86
SMARCA1-204ENST00000478420 POTEMA6NI47 508 aa9.68□□□□□ -0.86
SMARCA1-204ENST00000478420 CADPS2Q86UW7 1296 aa9.68□□□□□ -0.86
SMARCA1-204ENST00000478420 L3MBTL3Q96JM7 780 aaPredicted RBP9.68□□□□□ -0.86
SMARCA1-204ENST00000478420 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
SMARCA1-204ENST00000478420 POTEFA5A3E0 1075 aa9.66□□□□□ -0.86
SMARCA1-204ENST00000478420 MICALL2Q8IY33 904 aa9.66□□□□□ -0.86
SMARCA1-204ENST00000478420 OTUD5Q96G74 571 aa9.65□□□□□ -0.86
SMARCA1-204ENST00000478420 WDR70Q9NW82 654 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms